prot_M-pyrifera_M_contig67262.16261.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig67262.16261.1
Unique Name	prot_M-pyrifera_M_contig67262.16261.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	245

Homology

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BLAST of mRNA_M-pyrifera_M_contig67262.16261.1 vs. uniprot
Match: A0A7S1G6W4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6W4_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 5.530e-9
Identity = 48/153 (31.37%), Postives = 71/153 (46.41%), Query Frame = 0

Query:    3 LTRADALRLQRIVQAARLDMLDPDTLHMVLLTAEERGVLTLERFENVLHRLLPALSHERPARSAVWVRTMLRRIFAAFDRTGQRRVSGPEFAAALSLLVSGSKSDKIVLSWSRFSRAGSGIYGEREAASALGTPTRLGRIDLWRLIRSILVPL 155
            +T AD   L+R++ A+ L   +   LH       E GVL    F+  + RL+P  S     +   ++   L  IF AFDR G   V   EF +  SLLV GSKSDK+ L++  F   G G                + R+++W+ +R+ L  L
Sbjct:   50 ITGADVKHLRRVIAASHLAEKELPALHAEFKREAEDGVLDKPAFDRAIRRLIPGSSLSPEDKQ--FLSFALSNIFFAFDRDGNNVVDFDEFLSGFSLLVQGSKSDKLALAFRMFDEDGDGY---------------ISRLEMWKYLRAFLTML 185

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig67262.16261.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig67262.16261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A7S1G6W4_9STRA	5.530e-9	31.37	Hypothetical protein (Fragment) n=1 Tax=Bicosoecid...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 68..103 score: 8.906
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 24..134

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig67262	contig	M-pyrifera_M_contig67262:310..1044 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig67262.16261.1	mRNA_M-pyrifera_M_contig67262.16261.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig67262 310..1044 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig67262.16261.1 ID=prot_M-pyrifera_M_contig67262.16261.1|Name=mRNA_M-pyrifera_M_contig67262.16261.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=245bp
IALTRADALRLQRIVQAARLDMLDPDTLHMVLLTAEERGVLTLERFENVL
HRLLPALSHERPARSAVWVRTMLRRIFAAFDRTGQRRVSGPEFAAALSLL
VSGSKSDKIVLSWSRFSRAGSGIYGEREAASALGTPTRLGRIDLWRLIRS
ILVPLALLPFLEDRACASSSSMRQALLDEIDYRALQLTDLAVDEAPAIES
SEGEEEEDHFDDRGRKLSLEEFSVWYNRKRHKEISFLELTDLTKW

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair