prot_M-pyrifera_M_contig6721.16256.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6721.16256.1
Unique Nameprot_M-pyrifera_M_contig6721.16256.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length79
Homology
BLAST of mRNA_M-pyrifera_M_contig6721.16256.1 vs. uniprot
Match: D7FS37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS37_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 5.780e-27
Identity = 53/82 (64.63%), Postives = 65/82 (79.27%), Query Frame = 0
Query:    1 AKAITAGCSHTCGLLDDGSVKCFGYNNYGQLGQ----DIGDKSGQMGNNLKAVSLGSTKVVAIAAGCDFTCAVKNDGAVVCW 78
            A A+  GC HTCGLLDDG+VKCFGYNNYGQLGQ    ++GD +G+MG++L AVSL  T V A+AAGCD TCA+ +DG V+CW
Sbjct:  135 AVAVALGCRHTCGLLDDGTVKCFGYNNYGQLGQGTTENMGDDAGEMGDDLPAVSLDGT-VSAVAAGCDHTCALMDDGTVMCW 215          
BLAST of mRNA_M-pyrifera_M_contig6721.16256.1 vs. uniprot
Match: A0A6H5L2S4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2S4_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.380e-22
Identity = 46/78 (58.97%), Postives = 58/78 (74.36%), Query Frame = 0
Query:    1 AKAITAGCSHTCGLLDDGSVKCFGYNNYGQLGQDIGDKSGQMGNNLKAVSLGSTKVVAIAAGCDFTCAVKNDGAVVCW 78
            A A+ AGC HTCGLLDDG+VKCFGY        ++GD +G+MG++L AVSL  T V A+AAGCD TCA+ +DG V+CW
Sbjct:   79 AVAVAAGCRHTCGLLDDGTVKCFGYTT--GTTDNMGDDAGEMGDDLPAVSLDGT-VSAVAAGCDHTCALMDDGTVMCW 153          
BLAST of mRNA_M-pyrifera_M_contig6721.16256.1 vs. uniprot
Match: A0A7C1YRK2_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YRK2_9ACTN)

HSP 1 Score: 89.4 bits (220), Expect = 5.090e-19
Identity = 47/83 (56.63%), Postives = 58/83 (69.88%), Query Frame = 0
Query:    1 AKAITAGCSHTCGLLDDGSVKCFGYNNYGQLGQ----DIGDKSGQMGNNLKAVSLGSTKVV-AIAAGCDFTCAVKNDGAVVCW 78
            A AI AG  +TC LLDDG+VKC+G N+ GQLGQ    DIGD  G+MG+NL AV LG+ +   AI+AG   TCA+ +DG V CW
Sbjct:  171 ATAIAAGQQYTCALLDDGTVKCWGNNSSGQLGQGNTDDIGDNPGEMGDNLPAVDLGTGRTATAISAGSSHTCALLDDGTVKCW 253          
BLAST of mRNA_M-pyrifera_M_contig6721.16256.1 vs. uniprot
Match: A0A3L7WUR8_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3L7WUR8_9CHLR)

HSP 1 Score: 88.6 bits (218), Expect = 9.610e-19
Identity = 43/87 (49.43%), Postives = 59/87 (67.82%), Query Frame = 0
Query:    1 AKAITAGCSHTCGLLDDGSVKCFGYNNYGQLGQD----IGDKSGQMGNNLKAVSLGSTKVVAIAAGC-----DFTCAVKNDGAVVCW 78
            AK I AG  HTC +LD+GS+KC+G+N  GQLGQD    IGD SG+MG++L A++LGS +     A C     D+TCA+ ++G + CW
Sbjct:  272 AKTIAAGSYHTCAILDNGSLKCWGFNASGQLGQDTTANIGDGSGEMGDSLPAINLGSGRTAVAVAACKRGDLDYTCAILDNGTLKCW 358          
BLAST of mRNA_M-pyrifera_M_contig6721.16256.1 vs. uniprot
Match: A0A150SGB2_SORCE (Uncharacterized protein n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150SGB2_SORCE)

HSP 1 Score: 88.2 bits (217), Expect = 1.300e-18
Identity = 47/81 (58.02%), Postives = 57/81 (70.37%), Query Frame = 0
Query:    4 ITAGCSHTCGLLDDGSVKCFGYNNYGQLGQD-----IGDKSGQMGNNLKAVSLGSTKV-VAIAAGCDFTCAVKNDGAVVCW 78
            I AG SHTC LLDD SVKC+GYNNYGQLG +     IG  + +MG+NL  V+LG+ K  +AIAAG   TCA+ ND +V CW
Sbjct:  595 IAAGDSHTCALLDDNSVKCWGYNNYGQLGLERSISYIGRSATEMGDNLAPVNLGTGKTAIAIAAGQYHTCALLNDNSVKCW 675          
BLAST of mRNA_M-pyrifera_M_contig6721.16256.1 vs. uniprot
Match: A0A7C1YKS1_9ACTN (Fibronectin type-III domain-containing protein (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YKS1_9ACTN)

HSP 1 Score: 87.8 bits (216), Expect = 1.770e-18
Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 0
Query:    1 AKAITAGCSHTCGLLDDGSVKCFGYNNYGQLGQ----DIGDKSGQMGNNLKAVSLGSTKV-VAIAAGCDFTCAVKNDGAVVCW 78
            A  +  G SH C LLD+G+VKC+G+N  GQLGQ    DIGD  G+MG+NL ++ LG+ +  VAIAAG   TCA+ +DG++ CW
Sbjct:  162 AVMVVGGLSHVCALLDNGTVKCWGHNTAGQLGQGHTNDIGDNPGEMGDNLPSIDLGTGRTAVAIAAGSHHTCAILDDGSLKCW 244          
BLAST of mRNA_M-pyrifera_M_contig6721.16256.1 vs. uniprot
Match: A0A7C1YL65_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YL65_9ACTN)

HSP 1 Score: 86.3 bits (212), Expect = 6.080e-18
Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 0
Query:    1 AKAITAGCSHTCGLLDDGSVKCFGYNNYGQLGQ----DIGDKSGQMGNNLKAVSLGSTKVV-AIAAGCDFTCAVKNDGAVVCW 78
            A AITAG SHTC LLD+ +VKC+G N+YGQLGQ    DIGD  G+MG+NL  V LG+ +   AI AG   TCA+ ++  V CW
Sbjct:  226 ATAITAGDSHTCALLDNSTVKCWGDNSYGQLGQGTTDDIGDNPGEMGDNLPPVDLGAGRTATAITAGSFHTCALLDNNTVKCW 308          
BLAST of mRNA_M-pyrifera_M_contig6721.16256.1 vs. uniprot
Match: A0A4Q3JH07_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A4Q3JH07_9DELT)

HSP 1 Score: 82.0 bits (201), Expect = 8.940e-18
Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 0
Query:    1 AKAITAGCSHTCGLLDDGSVKCFGYNNYGQLG----QDIGDKSGQMGNNLKAVSLGS-TKVVAIAAGCDFTCAVKNDGAVVCW 78
            A+AI AG  HTC LL+D +VKC+G+N  GQLG    +D GDK G+MG+ L AV LG+  KV  +AA    TCAV +DG++ CW
Sbjct:   55 AQAIVAGSGHTCALLNDQTVKCWGWNVAGQLGLGDAEDRGDKPGEMGDALPAVDLGAGAKVTRLAASGSHTCAVLSDGSLRCW 137          
BLAST of mRNA_M-pyrifera_M_contig6721.16256.1 vs. uniprot
Match: A0A6I2WE64_9ACTN (Fibronectin type-III domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A6I2WE64_9ACTN)

HSP 1 Score: 85.5 bits (210), Expect = 1.150e-17
Identity = 43/83 (51.81%), Postives = 60/83 (72.29%), Query Frame = 0
Query:    1 AKAITAGCSHTCGLLDDGSVKCFGYNNYGQLG----QDIGDKSGQMGNNLKAVSLGSTKV-VAIAAGCDFTCAVKNDGAVVCW 78
            A+AI+AG +HTC +LD+ +VKC+G   YG+LG     D+GD +G+MG NL AVSLG+ +  +AI+AG   TCAV N+G+  CW
Sbjct:  349 ARAISAGIAHTCAVLDNATVKCWGNGGYGKLGYENQNDLGDGAGEMGTNLAAVSLGTGRTALAISAGGAHTCAVLNNGSAKCW 431          
BLAST of mRNA_M-pyrifera_M_contig6721.16256.1 vs. uniprot
Match: A0A812QEI3_9DINO (UVR8 protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812QEI3_9DINO)

HSP 1 Score: 84.7 bits (208), Expect = 1.400e-17
Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 0
Query:    1 AKAITAGCSHTCGLLDDGSVKCFGYNNYGQLGQ----DIGDKSGQMGNNLKAVSLGSTK-VVAIAAGCDFTCAVKNDGAVVCW 78
            A+A+ AG  H C LLDD SVKC+G N++GQLGQ     IGD+ G+MG NL+ V LGS +  +A+AAG   +CA+ +D +V CW
Sbjct:  286 AQALAAGEDHACALLDDNSVKCWGKNDFGQLGQGHTRSIGDEPGEMGENLQPVDLGSNRHALAVAAGALHSCAILDDYSVKCW 368          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6721.16256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS37_ECTSI5.780e-2764.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2S4_9PHAE1.380e-2258.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7C1YRK2_9ACTN5.090e-1956.63Uncharacterized protein n=1 Tax=Acidimicrobiales b... [more]
A0A3L7WUR8_9CHLR9.610e-1949.43Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
A0A150SGB2_SORCE1.300e-1858.02Uncharacterized protein n=1 Tax=Sorangium cellulos... [more]
A0A7C1YKS1_9ACTN1.770e-1851.81Fibronectin type-III domain-containing protein (Fr... [more]
A0A7C1YL65_9ACTN6.080e-1855.42Uncharacterized protein (Fragment) n=1 Tax=Acidimi... [more]
A0A4Q3JH07_9DELT8.940e-1853.01Uncharacterized protein (Fragment) n=1 Tax=Myxococ... [more]
A0A6I2WE64_9ACTN1.150e-1751.81Fibronectin type-III domain-containing protein n=2... [more]
A0A812QEI3_9DINO1.400e-1751.81UVR8 protein n=1 Tax=Symbiodinium necroappetens Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 1..78
e-value: 7.0E-18
score: 66.6
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 3..78
NoneNo IPR availablePFAMPF13540RCC1_2coord: 56..78
e-value: 9.9E-5
score: 22.0
coord: 2..30
e-value: 1.7E-8
score: 34.0
NoneNo IPR availablePANTHERPTHR45982:SF1REGULATOR OF CHROMOSOME CONDENSATIONcoord: 3..78
NoneNo IPR availablePANTHERPTHR45982FAMILY NOT NAMEDcoord: 3..78
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 18..72
score: 9.318

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6721contigM-pyrifera_M_contig6721:2506..3160 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6721.16256.1mRNA_M-pyrifera_M_contig6721.16256.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6721 2506..3160 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6721.16256.1 ID=prot_M-pyrifera_M_contig6721.16256.1|Name=mRNA_M-pyrifera_M_contig6721.16256.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=79bp
AKAITAGCSHTCGLLDDGSVKCFGYNNYGQLGQDIGDKSGQMGNNLKAVS
LGSTKVVAIAAGCDFTCAVKNDGAVVCW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens