prot_M-pyrifera_M_contig6716.16249.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6716.16249.1
Unique Nameprot_M-pyrifera_M_contig6716.16249.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length624
Homology
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI)

HSP 1 Score: 894 bits (2310), Expect = 0.000e+0
Identity = 494/616 (80.19%), Postives = 523/616 (84.90%), Query Frame = 0
Query:    1 MNFPKIGAQGYSLGSLYLNSDEFVWTSADKSSSKKVKWADVSHATWAQFGDYCHLRFFMKNDVPPVRLDGFGKAQHPDVEKFLSGRDIRLSKDRINCGGGNYGELEVLDNIVRFSSENRTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDMDGPSPAESLQMSVIDRANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQKYDGNLNSEMIGPLHNLIAKIFKVLANKPVYVTGKFSSNGGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVGGETTKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDGAMLQLGNLDDHDPYKAALDDDQGDDEESEDDADYAPDALGGSDAESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDAPKGAMSAFMQFSQAKRSETKEANPELKITEISKVLGEKWGKMDAEARGPYNKLAQTDKER 616
            MNF KIG QGYSLG+L L ++E  WTS DKSSSKKVKW DVSHATWAQ+  YCHLR FMK D  PVRLDGF KAQH D+EKFLS RD+ LS +  N GGGNYG++EVLDNIVRFSS N+TLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDED D  SPAESLQM+V++RANIHDVKGKVLVEFNESQGTFDFPRGRYS+EMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEA I VNMSA+DLQ+KYD NLNSEMIGPLHNLIAKIFKVL+NKPVYVTGKFSS  GAKAVKCALGANEG+LYPLNKSFIFIHKPTCIIGFDEI+SVEFQRYGGAQGAGVTRNFDLCVAPKSV GET KPYVFSGIDRSEY+SLYSFLSTKKLRIKNIK+SGND AMLQLG+LDDHDPYKAALDDDQG+DEESE                  XXXXXXXXXXXXXX                       XXXXXXXXXXXXXXXXX    KDAPKGAMSAFMQFSQA R++ K  NPELK+TEISKVLGEKWGK+D   + PY   A  DK R
Sbjct:    1 MNFSKIGVQGYSLGNLQLTAEELNWTSDDKSSSKKVKWLDVSHATWAQYAAYCHLRLFMKRDARPVRLDGFSKAQHADIEKFLSERDVSLSNESPNPGGGNYGDIEVLDNIVRFSSGNKTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEATITVNMSAEDLQKKYDSNLNSEMIGPLHNLIAKIFKVLSNKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKESGNDNAMLQLGDLDDHDPYKAALDDDQGEDEESE----XXXXXXXXXXXXXXXXXXXXXXXXXXXXDRAHKTSKKRPGTGSAKKGPTQKXXXXXXXXXXXXXXXXXAKKDKDAPKGAMSAFMQFSQANRAQVKTDNPELKVTEISKVLGEKWGKLDETQKKPYQDKADEDKAR 612          
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Match: A0A6H5L083_9PHAE (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L083_9PHAE)

HSP 1 Score: 606 bits (1562), Expect = 5.120e-211
Identity = 317/378 (83.86%), Postives = 333/378 (88.10%), Query Frame = 0
Query:  119 RTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDMDGPSPAESLQMSVIDRANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQKYDGNLNSEMIGPLHNLIAK----IFKVLANKPVYVTGKFSSNGGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVGGETTKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDGAMLQLGNLDDHDPYKAALDDDQGDDEESEDDADYAPDALGGSDA 492
            RTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDED D  SPAESLQM+V++RANIHDVKGKVLVEFNESQGTFDFPRGRYS+EMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEAAI VNMSA+DLQ+KYD NLNSEMIGPLHNL+AK    IFKVL++KPVYVTGKFSS  GAKAVKCALGANEG+LYPLNK                             GAGVTRNFDLCVAPKSV GET KPYVFSGIDRSEY+SLYSFLSTKKLRIKNIK+ GND AMLQLG+LDDHDPYKAALDDD+G+DEESEDDADYAPDA GGSDA
Sbjct:    3 RTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEAAITVNMSAEDLQKKYDSNLNSEMIGPLHNLVAKVPKLIFKVLSSKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNK-----------------------------GAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKERGNDNAMLQLGDLDDHDPYKAALDDDEGEDEESEDDADYAPDARGGSDA 351          
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Match: A0A836C825_9STRA (FACT complex subunit SSRP1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C825_9STRA)

HSP 1 Score: 434 bits (1115), Expect = 2.090e-141
Identity = 319/651 (49.00%), Postives = 388/651 (59.60%), Query Frame = 0
Query:    3 FPKIGAQGYSLGSLYLNSDEFVWTSADKSSSKKVKWADVSHATWAQFGDYCHLRFFMKNDV-PPVRLDGFGKAQHPDVEKFLSGRDIRLSKDRINCGGGNYGELEVLDNIVRFSSENRTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDMDGPS-----------------PAESLQMSVIDRANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQKYDGNLNSEMIGPLHNLIAKIFKVLANKPVYVTGKFSSNGGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAG-VTRNFDLCVAPKSVGGETTKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDGAMLQLGNLDDHDPYKAALDDDQGDDEESEDDADYAPDALGGSDAESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK------------------DAPKGAMSAFMQFSQAKRSETKEANPELKITEISKVLGEKWGKMDAEARGPYNKLAQTDKER 616
            F  IG QG+S+GS+  + +  +W S+D+SS +KV W+    ATWA FG Y HLR FMK+   PPVR DGF +A    +++ L+   I+LS+D+                                                               D LV +R+ LP++ ED DG                    AE+   +V+DRANI DVKG VL E + S GTF  PRGRY++EMYS F+RMHGS+YDYKIQY DI+KLFLLEKPD+RYVAFV+SLDKP+RQGQQ+YQHLVL+ +K E  + +NMS  +LQ+KY G L   M G L NLIAKIFK L+ + V+VTG + S  GAK VKCA+GA+EGHLYPLNKSFIFIHKPT +IGFDE++SVEFQRY G Q    V R+FDLCV  +S+ GE +K Y FSGIDRSEY SLY +  TK LRIKNIK SG+  A      +D  D  +           E +      P+A G       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        +                  +APKGA SAFM FS   R +  +  P LKITE+SKVLGE+W  M AE +  +   A  DK R
Sbjct:    9 FKGIGIQGHSVGSVKFSDEGVMWASSDRSSQQKVLWSKAEKATWAVFGKYAHLRMFMKDPADPPVRFDGFQRADFDRLKEALAAHSIKLSRDK---------------------------------------------------------------DCLVEMRLYLPDESEDDDGMEVDEDGEAIRKKDKKPRFTAETFHQAVMDRANIRDVKGSVLCELDSSLGTFLTPRGRYALEMYSTFLRMHGSKYDYKIQYEDINKLFLLEKPDDRYVAFVISLDKPVRQGQQRYQHLVLQASKVEETLNLNMSEAELQEKYKGALEPVMRGALCNLIAKIFKSLSGRAVFVTGNYRSAAGAKCVKCAMGASEGHLYPLNKSFIFIHKPTRVIGFDEVESVEFQRYSGTQDPSTVRRSFDLCVTLRSISGEPSKDYTFSGIDRSEYPSLYQWCQTKNLRIKNIKSSGDKVASALAEAMDSADVREEG---------EIKRVKSSEPEASGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSKPEGGKRKAPAXXXXXXXXXXXKDPNAPKGAKSAFMYFSMETRGDVLKDQPGLKITEVSKVLGERWRGMTAEDKKQFEDKAAADKAR 587          
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Match: A0A7S2SJ65_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SJ65_9STRA)

HSP 1 Score: 386 bits (991), Expect = 1.880e-123
Identity = 214/471 (45.44%), Postives = 291/471 (61.78%), Query Frame = 0
Query:    6 IGAQGYSLGSLYLNSDEFVWTSA------DKSSSKKVKWADVSHATWAQFGDYCHLRFFMKNDVPPVRLDGFGKAQHPDVEKFLSGR-DIRLSKDRINCGGGNYGELEVLDNIVRFSS----------------ENRTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DMDGPSPAESLQMSVIDRANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQKYDGNLNSEMIGPLHNLIAKIFKVLANKPVYVTGKFSSNGGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVGGETTKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDGA 449
            IG  G+S+G+   ++    W SA      D  +S+ +    V  A W  FG   HLR    N     R DGF  +    V   ++   D+  +K  ++  G ++G  E+ D  + F                  E   +  + + +VSQCV+PG  + N++ELQ HESD  +   D LVAIR  +P   E    D D P+ AE     ++  A I +  G V+VEF+E++GTF  PRGRY IE+Y  F+RM G++YDYKI+Y+DI++LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LVL+TTK+ + + VN+   +L+++Y G L   M G L NLIAK FK++A K V++ GKF +      VKCAL ANEGHLYPL KSF+FIHKP  +I FDE+DSVEFQRY G QG+  TRNFDLCV   S  G+  K Y+FSGIDRS+YTSLY+FLS KK++IKNI++S  D A
Sbjct:   15 IGLHGHSVGTFMADAQGIKWKSALLTDDDDVVTSRSISKKHVIGARWTIFGRSGHLRIQTPNTE--FRFDGFPYSDFDKVRDIMNEYYDVETNKLPMSTAGNSFGLTEIEDRNLAFKQCILEDADEEGEEFEPREGDEMMSMKLAEVSQCVLPGNNR-NEIELQFHESDTVEAGTDQLVAIRFYIPPDPEMDPSDRDAPTSAEVFHQRIMKNAKIKNTAGDVIVEFDENKGTFLTPRGRYLIELYDSFLRMRGNKYDYKIKYDDIARLFLLPKPDDTHMAFVIALDKPIRQGQQRYQMLVLQTTKENSEVTVNLDEKELEEEYKGELQPVMQGALCNLIAKTFKIIAKKKVFIPGKFVNAYQQSCVKCALKANEGHLYPLEKSFVFIHKPPVLIRFDEVDSVEFQRYAGGQGS--TRNFDLCVMLASSAGDPQKEYIFSGIDRSDYTSLYNFLSGKKIKIKNIQESKIDTA 480          
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Match: A0A7S4HR37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HR37_9STRA)

HSP 1 Score: 390 bits (1001), Expect = 5.060e-121
Identity = 273/664 (41.11%), Postives = 377/664 (56.78%), Query Frame = 0
Query:    6 IGAQGYSLGSLYLNSDEFVWTSA--------DKSSSKKVKWADVSHATWAQFGDYCHLRFFMKNDVP---PVRLDGFGKAQHP---DVEKFLSGRDIRLSKDRINCGGGNYGELEVLDNIVRFSS----------------ENRTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLP-EKDED---MDGPSPAESLQMSVIDRANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQKYDGNLNSEMIGPLHNLIAKIFKVLANKPVYVTGKFSSNGGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVGGETTKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGND---------------GAMLQLGNLDD--HDPYKAALDDDQGDDEESEDDADYAPDALGGSDAESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKD--APKGAMSAFMQFSQAKRSETKEANPELKITEISKVLGEKWGKMDAEARGPYNKLAQTDKER 616
            IG  G+S+G+   + D   W SA        D SSS+ +    +  A W  FG   H+R   K   P    +R DGF  A      DV K L   D+ L+K  ++  G ++G  ++ D  + F                  +   +   N+K++SQCV+PG  + N++E+Q HESDA +   D LVAIR  +P + D D   +D  +PAE  Q  ++  ANI    G V+VE  E++GTF  PRGRY+IE+Y  F+RM G++YDYKI+Y+DIS+LFLL KPDE ++AFV++LDKPIRQGQQ+YQ+LV++TTKD A + VN+  + L+++Y+G+L   M G L NL+AK FK++A K V++ GKF++      VKCAL A+EGHLYPL K FIFIHKPT ++ FD+++SVEFQRY G QG+  TRNFDLCV+  + G  +TK Y+FSGIDRS+YT LY+FLS KK++IKN++ +  D               G     G +++   D      D++  + E    D D        SD E                      XXXXXXX       XXXXXXXXXXXXXX        XX D  APK   SA+  F  A R + KE NP+    E+S + G+ W K+  E +  Y K+A++D  R
Sbjct:   10 IGLHGHSVGTFTADPDGLRWKSAVMGGGDNDDISSSRVLPAKTLVAAKWTVFGRSGHVRVRSKASDPVNAELRFDGFPAADFDRLRDVLKRLF--DVDLTKHAMSSAGTSFGLTDIEDGNMVFRQCILEDADEEGEEFEPRDGDEMMSANLKEISQCVLPGNNR-NEIEMQFHESDAVEAGTDQLVAIRFYIPPDPDADPSELDASTPAELFQQRIMKNANIKRTTGDVIVEIPEAKGTFLTPRGRYAIELYDTFLRMRGAKYDYKIKYDDISRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTKDHAELTVNLDEEVLEKEYNGDLQPVMYGALSNLVAKTFKIIAKKKVFIPGKFANANQQPCVKCALRASEGHLYPLEKQFIFIHKPTVLVRFDDVESVEFQRYAGGQGS--TRNFDLCVSLINSGDSSTKEYIFSGIDRSDYTGLYNFLSGKKIKIKNLQGNILDDAPSAPPVYNEDVIYGVPAGAGEMEESSEDESYGTNDEESVESESISGDDDDLGSGFDDSDLEEHRKAAKKSKPEDAKGKEKSNKXXXXXXXPEKEGSSXXXXXXXXXXXXXXDKVAPKKKXXXDPKAPKKGKSAYNYFLTAMRPKIKEQNPDATFGELSTLAGQAWKKVSNEEKEKYEKMAESDAAR 668          
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Match: A0A6U3RIK7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RIK7_9STRA)

HSP 1 Score: 375 bits (963), Expect = 2.850e-115
Identity = 214/483 (44.31%), Postives = 299/483 (61.90%), Query Frame = 0
Query:    6 IGAQGYSLGSLYLNSDEFVWTSA--------DKSSSKKVKWADVSHATWAQFGDYCHLRFFMKND-------VPPVRLDGFGKAQHPDVEK-FLSGRDIRLSKDRINCGGGNYGELEVLDN--------IVRFSSENRT---------LFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDMDGP-----SPAESLQMSVIDRANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQKYDGNLNSEMIGPLHNLIAKIFKVLANKPVYVTGKFSSNGGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVGGET-TKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDGA 449
            IG  G+S+G+   +     W SA        D  +S+ +    V+ A W  FG   H+R   K            +R DGF    +  V K F    ++ +++  ++  G ++G  + LDN        I+  + E            +  L + +VSQCV+PG  + N++ELQ HESD  +   D LV +R+ +P  D DMD       +PAE LQ  ++  ANI +  G V+VEF+ES+GTF  PRGRY+IE+Y  F+RM G++YDYKI+Y+DISKLFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LV++TTK+++ + VN+  + LQ +Y G+L   M G L NL+AK FKV+A K V++ GKF++      VKCAL ANEGHLYPL K F+FIHKP  ++ FDE++SVEFQRY G QG+  TRNFDLCV   +  G+T +K YVFSGIDRS+YT LY+FLS KK++I N +  G + A
Sbjct:   14 IGLHGHSVGTFTADPAAIQWKSAMMGASDDDDIVTSRLIPPRSVASAQWTVFGRSGHIRIQQKPGGGSQSAVALELRFDGFPPTDYDKVRKSFQRLYNVDVTRHSMSSCGASFGNTD-LDNRNLVFRQCILEDNDEEGMEVEPQNGDEMMSLQLAEVSQCVLPGNNR-NEIELQFHESDTVEAGTDQLVGVRIYIP-PDPDMDPQDNDVQTPAEILQQRIMKMANIKNTTGSVIVEFDESRGTFLTPRGRYTIELYDSFLRMRGNKYDYKIKYDDISKLFLLPKPDDVHMAFVIALDKPIRQGQQRYQMLVMQTTKEQSEVSVNLDEETLQSEYGGDLQPMMYGALSNLVAKTFKVIAKKKVFIPGKFANANQQACVKCALRANEGHLYPLEKQFVFIHKPPVLVRFDEVESVEFQRYAGGQGS--TRNFDLCVTLLNTSGDTGSKEYVFSGIDRSDYTGLYNFLSGKKIKINNFQGVGMEDA 491          
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Match: K0SUI2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUI2_THAOC)

HSP 1 Score: 372 bits (954), Expect = 5.340e-115
Identity = 278/662 (41.99%), Postives = 399/662 (60.27%), Query Frame = 0
Query:    2 NFPKIGAQGYSLGSLYLNSDEFVWTSA-----DKSSSKKVKWADVSHATWAQFGDYCHLRFFMK-------NDVPP-VRLDGFGKAQHPDVEKFLSGRD---IRLSKDRINCGGGNYGELEVLDNIVRFSSENRT----------------LFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DMDGPSPAESLQMSVIDRANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQKYDGNLNSEMIGPLHNLIAKIFKVLANKPVYVTGKFSSNGGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVGGET--TKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDGAMLQLGNLDDHDPYKAALDDDQGDDEESEDDADYAPDA---------LGGSDAESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDAPKGAMSAFMQFSQAKRSETKEANPELKITEISKVLGEKWGKMDAEARGPYNKLAQTDKER 616
            ++  IG  G+++G+        +W S+     D  + + +    +S A W  FG   HLR   K         +P  +R DGF    +  + + L  RD   + L +  ++  G ++G  ++ +  + F   N                  +  L++ +VSQCV+PG  + N++E+Q  ESD  +   D LVA+R  +P   +    D D P+ AE+LQ  ++  A++    G ++ EF+E +GTF  PRGRYSIE+Y  F+R+ G++YDYKI+Y+DIS+LFLL + D+  VAFV++LDKPIRQGQQ+Y  LV++ TK+ + + +N+    L+++Y G +   M G   NL+AK FKV+  K V++ GKF+++     VKCAL ANEGHLYPL K FIFIHKP  +I FDEI+SVEFQRY G QG+  TRNFDLCV+  S  G++  TK Y FSGID+S Y +LYSFLS KK++IKN++  G +         D+        DD++ DD + +++A  + D+         LG   ++ S        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   XXXXXX   +APK   SA++ F+ AKRSE KEANP+    +ISK+LG+ + ++    + PY+++A+ DK R
Sbjct:    7 SWKHIGLYGHAVGTFSATRHGIMWKSSVMGNDDIETKRVLPRESISGALWTVFGKSGHLRVLTKAPREGEQTKLPAAMRFDGFPGTDYEAMSEAL--RDLFGVTLKRHSMSSAGSSWGNTDISNKHLVFRQCNLEDADEDGQEFEPRDGDEMMSLDLGEVSQCVLPGNNR-NEIEMQFLESDTVEAGTDQLVALRFYVPPDADADPTDKDAPTSAEALQSRIMQIASVKKTSGSIIAEFDEGKGTFLTPRGRYSIELYDSFLRLRGAKYDYKIKYDDISRLFLLPRQDDMTVAFVIALDKPIRQGQQRYNMLVMQCTKEHSELNINLDEATLEKEYGGQIEQHMNGSFSNLVAKTFKVITRKKVFIPGKFANSNQQACVKCALRANEGHLYPLEKQFIFIHKPAVLIRFDEIESVEFQRYAGGQGS--TRNFDLCVSLHSTPGDSASTKEYTFSGIDKSNYAALYSFLSGKKIKIKNLEGVGEEPKKPGAPRYDER-----MSDDEESDDSDFDENAPKSDDSXXXXXXXXDLGSVVSDDSDLAEHRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSXXXXXXRDPNAPKAPKSAYVFFTSAKRSEIKEANPDAGFGDISKLLGKAYKELSDAEKEPYDEMARKDKAR 658          
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Match: A0A1E7FQX7_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQX7_9STRA)

HSP 1 Score: 367 bits (943), Expect = 8.190e-115
Identity = 208/438 (47.49%), Postives = 280/438 (63.93%), Query Frame = 0
Query:   34 KKVKWADVSHATWAQFGDYCHLRFFM-----KNDVPPVRLDGFGKAQHPDVEKFLSGR-DIRLSKDRINCGGGNYGELEVLDNIVRFSS---ENRT---LFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DMDGPSPAESLQMSVIDRANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQKYDGNLNSEMIGPLHNLIAKIFKVLANKPVYVTGKFSSNGGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVGGETT--KPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDGAMLQL 453
            K +   ++  A W  FG   HLR  +     KN    +R DGF  A   D++ F     DI +SK  I+  G  YG+ ++    + F     E RT   +  L++ +VSQCV+PG  + N+VELQ  ESDA +   D LV++R+ +P   E    D    + AE LQ  ++  ANI    G V+VEF+  +G+F  PRGRYSIE+Y  F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD   + VN+  D L+++Y  +L   M G L NL+AK FKV+A K V++ GKFS+      VKCAL ANEG LYPL K FIFIHKP  +I F+E++SVEFQRY G QG+  TRNFDLCV  K+     +  + YVFSGIDRS+YT LY+FLSTK +RIKN+++    GA+ Q+
Sbjct:    1 KNIPKGNIEKAGWTVFGKSGHLRIGVIVKEGKNGPSELRFDGFPVASFDDLKDFFQENYDIEVSKHNISSAGTQYGQSKISGKKLLFQHCEFEVRTGDEMMSLDLGEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSVRLYIPPDPEVDPSDKTAKTSAELLQHRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEVRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFIFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVTLKASAASISNQQEYVFSGIDRSDYTGLYNFLSTKSIRIKNLQEIS--GAVEQV 433          
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Match: A0A7S1C2J2_9STRA (FACT complex subunit SSRP1 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C2J2_9STRA)

HSP 1 Score: 358 bits (920), Expect = 1.370e-111
Identity = 209/490 (42.65%), Postives = 304/490 (62.04%), Query Frame = 0
Query:    6 IGAQGYSLGSLYLNSDEFVWTS------ADKSSSKKVKWAD-VSHATWAQFGDYCHLRFFMKNDVPPVRLDGFGKAQHPDVEKFLSGR-DIRLSKDRINCGGGNYGELEVLDNIVRF-----------SSENRTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DMDGPSPAESLQMSVIDRANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQKYDGNLNSEMIGPLHNLIAKIFKVLANKPVYVTGKFSSNGGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVGGET--TKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDG--AMLQLGNLDDHDPYKAALDD 468
            IG   +S+G+L  + +   W S         + S KV  AD +  A+W  FG   +LR         +R DGF  +   D+    S   +  L K  +   G +YG  +V ++++ F           +   + +  L++ +VSQCV+PG  + ND+ELQ HESDA +   D LV +R  +P   +    D D P+ AE  Q S++ +A I +    V+V+F+E++G+F  PRGRY++E+Y  ++RMHG++YDYKI Y DIS+LFLL + +E+  AFV++LDKPIRQGQQ+YQ+LVL+TT  ++ + +N+  + L ++Y+G+L  ++ G L NL+AK FKV+  K V+V GKF++  G   VKCAL ANEG LYPL K F+FIHKP+ ++ FDEI+SVEFQRY G QG+  TRNFDLCV   ++ GE+  +K YVFSGIDR++Y +LYSFLS KK+RI NI  +G +   A  +    DD+D    A DD
Sbjct:   14 IGLHKHSVGTLTADQNALRWKSNTFRDITGATGSVKVTNADDIVDASWMIFGRVGYLRV-RTGGGKELRFDGFPPSDFEDLATVFSNYYNSVLEKKSVAGCGASYGITDVEESVLTFYENEVDEEGADNQRGQEILSLDLTEVSQCVLPGNNR-NDIELQFHESDAGEVGTDQLVQLRFYVPPDPDADQADRDVPTAAELFQKSIMTQARIKNSSMNVIVQFDENRGSFLTPRGRYAMELYDSYLRMHGNKYDYKINYADISRLFLLPRQEEQNKAFVIALDKPIRQGQQRYQYLVLQTTTAQSEVTINLDQETLDREYNGDLQPQVRGSLCNLVAKCFKVITRKKVFVPGKFTNAYGQSFVKCALRANEGSLYPLEKQFVFIHKPSVLVRFDEIESVEFQRYAGGQGS--TRNFDLCVRLLNITGESGGSKEYVFSGIDRTDYNTLYSFLSGKKIRIANIADNGMESGQASARAAMYDDNDTRNDAGDD 499          
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Match: A0A7S0TAB4_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0TAB4_9STRA)

HSP 1 Score: 360 bits (923), Expect = 8.470e-111
Identity = 211/474 (44.51%), Postives = 287/474 (60.55%), Query Frame = 0
Query:    6 IGAQGYSLGSLYLNSDEFVWTSA-------DKSSSKKVKWADVSHATWAQFGDYCHLRFFMK------NDVPPVRLDGFGKAQHPDVEK-FLSGRDIRLSKDRINCGGGNYGELEVLDNIVRFSS-------------ENRT---LFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DMDGPSPAESLQMSVIDRANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQKYDGNLNSEMIGPLHNLIAKIFKVLANKPVYVTGKFSSNGGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVGGETT--KPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQ 443
            IG  G+S+G+         W SA          +++ +  + +  A W  FG   HLR  +       N    +R DGF  A   +++  F     I +SK  I+  G  YG+ ++L   + F               E RT   +  L++ +VSQCV+PG  + N+VELQ  ESDA +   D LV+IR  +P   E    D    S AE LQ  ++  ANI    G V+VEF+  +G+F  PRGRYSIE+Y  F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD   I VN+  D L+++Y  +L   M G L NL+AK FKV+A K V++ GKFS+      VKCAL ANEG LYPL K F+FIHKP  +I F+E++SVEFQRY G QG+  TRNFDLCV+ K+     +  + YVFSG+DRS+YT LY+FLSTK +RIKN+++
Sbjct:   10 IGLHGHSVGTFACGEAGVQWKSALYGRDDTGSGTTRNIPKSLIERAAWTVFGKSGHLRLKVAQQEGKANLHHEMRFDGFPVAAFDNLKDVFQDTYGIEVSKHNISSAGTQYGQSKILGKKLVFQHCILEDADEEGEEFEVRTGDEMMSLDLAEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSIRFYIPPDPEVDPSDRTVKSSAELLQQRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEIRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFVFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVSLKASAASVSNQQEYVFSGVDRSDYTGLYNFLSTKNIRIKNLQE 480          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF8_ECTSI0.000e+080.19FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sili... [more]
A0A6H5L083_9PHAE5.120e-21183.86FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. ... [more]
A0A836C825_9STRA2.090e-14149.00FACT complex subunit SSRP1 n=1 Tax=Tribonema minus... [more]
A0A7S2SJ65_9STRA1.880e-12345.44FACT complex subunit SSRP1 (Fragment) n=1 Tax=Euca... [more]
A0A7S4HR37_9STRA5.060e-12141.11Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A6U3RIK7_9STRA2.850e-11544.31Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
K0SUI2_THAOC5.340e-11541.99Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A1E7FQX7_9STRA8.190e-11547.49FACT complex subunit SSRP1 (Fragment) n=1 Tax=Frag... [more]
A0A7S1C2J2_9STRA1.370e-11142.65FACT complex subunit SSRP1 n=1 Tax=Corethron hystr... [more]
A0A7S0TAB4_9STRA8.470e-11144.51FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000969Structure-specific recognition proteinPRINTSPR00887SSRCOGNITIONcoord: 349..367
score: 55.26
coord: 213..229
score: 45.59
coord: 258..274
score: 61.76
coord: 322..335
score: 36.61
coord: 367..384
score: 54.86
coord: 235..251
score: 52.21
IPR013719Domain of unknown function DUF1747SMARTSM01287Rtt106_2coord: 341..441
e-value: 8.4E-33
score: 125.0
IPR013719Domain of unknown function DUF1747PFAMPF08512Rtt106coord: 343..440
e-value: 9.6E-23
score: 80.4
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 556..616
e-value: 2.2E-12
score: 57.1
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 557..616
e-value: 6.4E-16
score: 58.5
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 557..616
score: 14.464
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 332..439
e-value: 1.2E-32
score: 114.0
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 540..619
e-value: 3.7E-20
score: 74.0
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 544..617
IPR024954SSRP1 domainPFAMPF03531SSrecogcoord: 99..169
e-value: 5.8E-16
score: 58.2
IPR038167SSRP1 domain superfamilyGENE3D2.30.29.220coord: 88..175
e-value: 4.7E-6
score: 28.3
IPR035417FACT complex subunit POB3-like, N-terminal PH domainPFAMPF17292POB3_Ncoord: 12..84
e-value: 9.8E-11
score: 41.9
NoneNo IPR availableGENE3D2.30.29.150coord: 191..331
e-value: 2.0E-47
score: 162.4
NoneNo IPR availablePANTHERPTHR45849:SF1FACT COMPLEX SUBUNIT SSRP1coord: 8..559
NoneNo IPR availablePANTHERPTHR45849FAMILY NOT NAMEDcoord: 8..559
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 210..440

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6716contigM-pyrifera_M_contig6716:4388..13207 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6716.16249.1mRNA_M-pyrifera_M_contig6716.16249.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6716 4388..13207 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6716.16249.1 ID=prot_M-pyrifera_M_contig6716.16249.1|Name=mRNA_M-pyrifera_M_contig6716.16249.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=624bp
MNFPKIGAQGYSLGSLYLNSDEFVWTSADKSSSKKVKWADVSHATWAQFG
DYCHLRFFMKNDVPPVRLDGFGKAQHPDVEKFLSGRDIRLSKDRINCGGG
NYGELEVLDNIVRFSSENRTLFDLNIKDVSQCVMPGVKKSNDVELQLHES
DATDQTEDTLVAIRVTLPEKDEDMDGPSPAESLQMSVIDRANIHDVKGKV
LVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLE
KPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQK
YDGNLNSEMIGPLHNLIAKIFKVLANKPVYVTGKFSSNGGAKAVKCALGA
NEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLC
VAPKSVGGETTKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDGAM
LQLGNLDDHDPYKAALDDDQGDDEESEDDADYAPDALGGSDAESSSGSDE
DDEGESDHDVREKSKKSKKKGAVKKEATKSKRPSASSGSGSSKPQPKKRA
KKDKDAPKGAMSAFMQFSQAKRSETKEANPELKITEISKVLGEKWGKMDA
EARGPYNKLAQTDKERCVVFHSI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000969SSrcognition
IPR013719DUF1747
IPR009071HMG_box_dom
IPR011993PH-like_dom_sf
IPR036910HMG_box_dom_sf
IPR024954SSRP1_dom
IPR038167SSRP1_sf
IPR035417POB3_N