prot_M-pyrifera_M_contig67037.16224.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig67037.16224.1
Unique Nameprot_M-pyrifera_M_contig67037.16224.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length106
Homology
BLAST of mRNA_M-pyrifera_M_contig67037.16224.1 vs. uniprot
Match: A0A7S2REZ6_9STRA (Hypothetical protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2REZ6_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.810e-8
Identity = 34/80 (42.50%), Postives = 52/80 (65.00%), Query Frame = 0
Query:   27 LASLVPDPKPTETLLSAVPVVYPTNASTSFKYKATLVPGRGKRGKVSKSAVEAAIRNAKGSSTEREVDLIRLIPDDSIVQ 106
            L S   +PK  +T+L A+PV  P  A+ ++K++  +VPG  KRG+ SK+A E  +R    S+TERE +LI+ I D+ +VQ
Sbjct:  901 LKSFTCNPKAEDTILYALPVCGPPQATLNYKHRIKIVPGSMKRGRASKTATEILVR--ANSTTEREKELIKYIIDNQLVQ 978          
BLAST of mRNA_M-pyrifera_M_contig67037.16224.1 vs. uniprot
Match: A0A5K3F203_MESCO (NFACT-C domain-containing protein n=1 Tax=Mesocestoides corti TaxID=53468 RepID=A0A5K3F203_MESCO)

HSP 1 Score: 52.8 bits (125), Expect = 9.890e-6
Identity = 36/99 (36.36%), Postives = 55/99 (55.56%), Query Frame = 0
Query:    9 GEEEEEEGEIVDAGLKMILASLVPDPKPTETLLSAVPVVYPTNASTSFKYKATLVPGRGKRGKVSKSAVEAAIRNAKGSSTE-------REVDLIRLIP 100
            G+EEE+EG +     +  L +L   P   +TLL A+P   P +A   +KYKA L+PG  KRGK++K A++   ++   S  E       RE D+ R++P
Sbjct:  410 GKEEEDEG-VAWVAEESPLETLTGQPVDEDTLLFALPFCAPYSALAKYKYKAKLIPGTQKRGKITKLAIQHFSQDKAASQLEKQLIQCLREEDVCRVLP 507          
BLAST of mRNA_M-pyrifera_M_contig67037.16224.1 vs. uniprot
Match: A0A0R3UJK3_MESCO (Uncharacterized protein n=2 Tax=Mesocestoides corti TaxID=53468 RepID=A0A0R3UJK3_MESCO)

HSP 1 Score: 52.8 bits (125), Expect = 1.040e-5
Identity = 36/99 (36.36%), Postives = 55/99 (55.56%), Query Frame = 0
Query:    9 GEEEEEEGEIVDAGLKMILASLVPDPKPTETLLSAVPVVYPTNASTSFKYKATLVPGRGKRGKVSKSAVEAAIRNAKGSSTE-------REVDLIRLIP 100
            G+EEE+EG +     +  L +L   P   +TLL A+P   P +A   +KYKA L+PG  KRGK++K A++   ++   S  E       RE D+ R++P
Sbjct:  855 GKEEEDEG-VAWVAEESPLETLTGQPVDEDTLLFALPFCAPYSALAKYKYKAKLIPGTQKRGKITKLAIQHFSQDKAASQLEKQLIQCLREEDVCRVLP 952          
BLAST of mRNA_M-pyrifera_M_contig67037.16224.1 vs. uniprot
Match: A0A061RK70_9CHLO (Nuclear export mediator factor nemf-like n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RK70_9CHLO)

HSP 1 Score: 49.7 bits (117), Expect = 9.380e-5
Identity = 31/79 (39.24%), Postives = 43/79 (54.43%), Query Frame = 0
Query:   27 LASLVPDPKPTETLLSAVPVVYPTNASTSFKYKATLVPGRGKRGKVSKSAVEAAIRNAKGSSTEREVDLIRLIPDDSIV 105
            L SL   P+  + LL A+PV  P  A   +KY+  L PGR K+GK +K A++  I      +T RE +LIR + D   V
Sbjct:  146 LDSLTGIPRXDDLLLFAIPVCAPYAALNGYKYRVKLTPGRQKKGKAAKEALD--IFGRVNEATSREKELIRAVTDTEAV 222          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67037.16224.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7S2REZ6_9STRA2.810e-842.50Hypothetical protein n=2 Tax=labyrinthulid quahog ... [more]
A0A5K3F203_MESCO9.890e-636.36NFACT-C domain-containing protein n=1 Tax=Mesocest... [more]
A0A0R3UJK3_MESCO1.040e-536.36Uncharacterized protein n=2 Tax=Mesocestoides cort... [more]
A0A061RK70_9CHLO9.380e-539.24Nuclear export mediator factor nemf-like n=1 Tax=T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021846NFACT protein, C-terminalPFAMPF11923NFACT-Ccoord: 25..105
e-value: 1.7E-14
score: 53.6
NoneNo IPR availablePANTHERPTHR15239:SF6NUCLEAR EXPORT MEDIATOR FACTOR NEMFcoord: 10..105
NoneNo IPR availablePANTHERPTHR15239UNCHARACTERIZEDcoord: 10..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67037contigM-pyrifera_M_contig67037:465..1040 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67037.16224.1mRNA_M-pyrifera_M_contig67037.16224.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig67037 465..1040 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig67037.16224.1 ID=prot_M-pyrifera_M_contig67037.16224.1|Name=mRNA_M-pyrifera_M_contig67037.16224.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=106bp
GEVGGEVGGEEEEEEGEIVDAGLKMILASLVPDPKPTETLLSAVPVVYPT
NASTSFKYKATLVPGRGKRGKVSKSAVEAAIRNAKGSSTEREVDLIRLIP
DDSIVQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021846NFACT-C