prot_M-pyrifera_M_contig6683.16182.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6683.16182.1
Unique Nameprot_M-pyrifera_M_contig6683.16182.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length502
Homology
BLAST of mRNA_M-pyrifera_M_contig6683.16182.1 vs. uniprot
Match: D8LSJ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSJ6_ECTSI)

HSP 1 Score: 449 bits (1155), Expect = 2.710e-143
Identity = 323/513 (62.96%), Postives = 358/513 (69.79%), Query Frame = 0
Query:    1 MVARRDSPDSETWLLLLNAVGTADSLDKAVALMERSRAEGNGSEINELTYSALLGACGRAKKLARAFRIVQGMRDTGVKPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISEENNLRSRAIRRARVLETRASSATTAXXXXXXXPVSPSPSDAIAGSAAEAVGRAAERS---SEKPRST-GAAEVF---AAHDSG----LRASAAGARDDVSVGGATAXXXXXXXXXXXXXXXXXXXPSVESRPATAPAPTVADAARAXXXXXXXXXXXXXXXXXXXXXXXXXSPVPMFLPDMASSTSENPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDDQGGGLQPDAVTYTSLIKAAARASPPRVEEAEEIYVTMQQRTNHFSTFARPTEVTYAHLMMASVMSGNFSRALEVWREQLAAGVAPGARSTRAALAACAGAGNIDIALKVYGMMRNAAIRPENRSLLDLVKLCRASGMPEVA 502
            MV RRDSPD ETWLLLLNAV TA +LDKAV LMERSRAEG+GSEINELTYSALLGACGRAKKLARAFRIVQ MR+TGVKPT  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   ISEEN LR+RA++R R+LETR S  +++          P+   ++A +AA A G  A+ S   S  P +T G A         D G    +RA A G    V+ GG                       S  S   TA   T A                                     P   SS + NPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDD +GGGLQPDAVTYTSLIKAAARA PPRVEEAEEI+ TMQQRTNHFSTFARPTEVTYAHLM ASVM+ ++ RALE+WR+QL+AGVAPG RSTRAALAAC GAG++D AL+VY +MR   IRP +R+LLDLV LCRA+G+  VA
Sbjct:  568 MVERRDSPDGETWLLLLNAVDTAGALDKAVELMERSRAEGHGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGVKPTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKAISEENTLRTRALQRTRMLETRRSPPSSSAVRR------PAEGSSVA-AAASAPGAPAQSSPLPSTAPGTTSGGASTLPRDGVDDRGKSLDVRADAVGTTKVVAGGGKGPAAAATRAHAKEEPSVIAAWSSSSSGRGTAGPATKAGGVGGYASSGRSEASLRGPTADPTESSRA--------PSSTSSDNANPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDAVTYTSLIKAAARAVPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRASVMAEDYGRALEIWRQQLSAGVAPGPRSTRAALAACGGAGDVDTALQVYDVMREGGIRPNSRALLDLVNLCRANGLQSVA 1065          
BLAST of mRNA_M-pyrifera_M_contig6683.16182.1 vs. uniprot
Match: A0A836CEM1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEM1_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.620e-53
Identity = 106/200 (53.00%), Postives = 142/200 (71.00%), Query Frame = 0
Query:  303 TSENPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDDQGGGLQPDAVTYTSLIKAAARASPPRVEEAEEIYVTMQQRTNHFSTFARPTEVTYAHLMMASVMSGNFSRALEVWREQLAAGVAPGARSTRAALAACAGAGNIDIALKVYGMMRNAAIRPENRSLLDLVKLCRASGMPEVA 502
            T  +PA DNLFRVFLVF EM+S+GV+PD  AYNAL+N+CA +G+ +RA+ V+R M +D+    L PDA+T+TSLIK AA A     + AEEI+  MQQRTNHFSTF RP+E T+ H++ A++    FSR  E+W + LA G+AP +R+    L AC   G++  AL VYG+M  A IRP+NRSLL LV+LC ++GM + A
Sbjct:  651 THSDPAADNLFRVFLVFGEMKSQGVQPDRPAYNALINSCAAVGDLERAMAVLRQMYEDEHC--LPPDAITFTSLIKTAAAAH--NADAAEEIFAAMQQRTNHFSTFHRPSERTFRHMITANMNIKRFSRVQELWAQMLAEGLAPSSRTCSLVLGACRHQGDLTQALSVYGVMNTAGIRPDNRSLLSLVRLCESAGMADKA 846          
BLAST of mRNA_M-pyrifera_M_contig6683.16182.1 vs. uniprot
Match: A0A6U9CLR6_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6U9CLR6_EMIHU)

HSP 1 Score: 105 bits (261), Expect = 6.920e-22
Identity = 72/210 (34.29%), Postives = 97/210 (46.19%), Query Frame = 0
Query:  297 PDMASSTSENPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDDQGGGLQPDAVTYTSLIKAAARASPPRVEEAEEIYVTMQQRTNHFSTFARPTEVTYAHLMMASVMSGNFSRALEVWREQLAAGVAPGARSTRAALAACAG----AGNIDIALKVYGMMRNAAIRPENRSLLDLVKLCRASGMPEVA 502
            P +       P  D L  VF VF EMR+ GV PD  A+NALV+ CA  G+  RA G                                  R      I+V MQQRTNH+ST+  PT  +YAHLM     +GN SR L++  E  A+G+ P       AL AC        ++  AL +Y  MR+  +R ++R LL   +LC A G P+++
Sbjct:   28 PFLVEGGGVGPPSDELRAVFAVFGEMRASGVSPDRAAFNALVHACAREGDVPRAEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR------IWVEMQQRTNHYSTYTPPTPHSYAHLMAVQRRAGNASRTLQLLEELRASGLTPSTVHYSLALRACEQHRELPNSLQRALALYSQMRSQGLRLDSRGLLAATRLCDAHGRPDLS 231          
BLAST of mRNA_M-pyrifera_M_contig6683.16182.1 vs. uniprot
Match: A0A7S0XEC2_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEC2_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.690e-19
Identity = 53/113 (46.90%), Postives = 75/113 (66.37%), Query Frame = 0
Query:  310 DNLFRVFLVFQEMR-SRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDDQGGGLQPDAVTYTSLIKAAA-RASPPRVEEAEEIYVTMQQRTNHFSTFARPTEVTYAHLM 420
            D+LFR++LVFQEM+ +  ++ D   YN L+N CA +G+ DRAL  +  M    Q  G++P+ +TYTSLIKA A  +    +E AE I+  MQQR+NHFS + +P E+TY  LM
Sbjct:  173 DDLFRLYLVFQEMKYNPAIQLDTAVYNTLINACAGVGDIDRALETMTAM----QENGIEPNVITYTSLIKACAFNSRNEMIELAENIFNEMQQRSNHFSNYIQPNEMTYEKLM 281          
BLAST of mRNA_M-pyrifera_M_contig6683.16182.1 vs. uniprot
Match: R1ESG5_EMIHU (PPR_long domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ESG5_EMIHU)

HSP 1 Score: 97.8 bits (242), Expect = 5.230e-18
Identity = 69/200 (34.50%), Postives = 91/200 (45.50%), Query Frame = 0
Query:  307 PALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDDQGGGLQPDAVTYTSLIKAAARASPPRVEEAEEIYVTMQQRTNHFSTFARPTEVTYAHLMMASVMSGNFSRALEVWREQLAAGVAPGARSTRAALAACAG----AGNIDIALKVYGMMRNAAIRPENRSLLDLVKLCRASGMPEVA 502
            P  D L  VF VF EMR+ GV PD  A+NALV+ CA  G+  RA G                                  R      I+V MQQRTNH+ST+  PT  +YAHLM     +GN SR L++  E  A+G+ P       AL AC        ++  AL +Y        R ++R LL   +LC A G P+++
Sbjct:  317 PPSDELRAVFAVFGEMRASGVSPDRAAFNALVHACAREGDVPRAEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR------IWVEMQQRTNHYSTYTPPTPHSYAHLMAVQRRAGNASRTLQLLEELRASGLTPSTVHYSLALRACEQHRELPNSLQRALALYSQXXXXXXRLDSRGLLAATRLCDAHGRPDLS 510          
BLAST of mRNA_M-pyrifera_M_contig6683.16182.1 vs. uniprot
Match: A0A0G4F8K7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F8K7_VITBC)

HSP 1 Score: 87.0 bits (214), Expect = 2.510e-14
Identity = 60/194 (30.93%), Postives = 92/194 (47.42%), Query Frame = 0
Query:  310 DNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDDQGGGLQPDAVTYTSLIKAAARASPPRVEEAEEIYVTMQQRTNHFSTFARPTEVTYAHLMMASVMSGNFSRALEVW-REQLAAGVAPGARSTRAALAACAGAGNIDIALKVYGMMRNAAIRPENRSLLDLVKLCRASGMPEVA 502
            +NLFR+FLVFQEM+S GV+PDL AYN L++ C   GE ++A+ V                                     A      MQQRTNHF++   P+E+T+  LM+A+  +    R  E++   Q   G+ P  R+   A+        ++ AL +Y  +    +R +NRSL  L+ L    G+ ++A
Sbjct:  642 ENLFRIFLVFQEMQSSGVQPDLCAYNTLLDACGRAGEVEKAMEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTA------MQQRTNHFASCVLPSELTFKQLMLANRNAYRLRRVFELFDMMQRQHGIRPTLRTGAIAIQLACEVKQVERALDIYRTLTANRVRLDNRSLHALLSLLNEKGLHDMA 829          
BLAST of mRNA_M-pyrifera_M_contig6683.16182.1 vs. uniprot
Match: R1DCP2_EMIHU (PPR_long domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DCP2_EMIHU)

HSP 1 Score: 71.2 bits (173), Expect = 6.240e-10
Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = 0
Query:  394 IYVTMQQRTNHFSTFARPTEVTYAHLMMASVMSGNFSRALEVWREQLAAGVAPGARSTRAALAACAG----AGNIDIALKVYGMMRNAAIRPENRSLLDLVKLCRASGMPEVA 502
            I+V MQQRTNH+ST+  PT  +YAHLM     +GN SR L++  E  A+G+ P       AL AC        ++  AL +Y        R ++R LL   +LC A G P+++
Sbjct:  170 IWVEMQQRTNHYSTYTPPTPHSYAHLMAVQRRAGNASRTLQLLEELRASGLTPSTVHYSLALRACEQHRELPNSLQRALALYSQXXXXXXRLDSRGLLAATRLCDAHGRPDLS 282          
BLAST of mRNA_M-pyrifera_M_contig6683.16182.1 vs. uniprot
Match: A0A7S2E620_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E620_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 4.370e-8
Identity = 34/90 (37.78%), Postives = 52/90 (57.78%), Query Frame = 0
Query:  306 NPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDDQGGGLQPDAVTYTSLIKAAARASPPRVEEAEEIY 395
            N A   L +VFLVFQEMR  G +PD   YN L+  CA  G+F RA  V+  ++D D    L+P  V++  +++AA+R+        E+++
Sbjct:  751 NDAKTLLVKVFLVFQEMRDAGAKPDTACYNVLLGACARAGDFTRARDVLNKLMDSDD---LEPTHVSWREMLRAASRSKTASSHLVEQVW 837          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6683.16182.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LSJ6_ECTSI2.710e-14362.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CEM1_9STRA1.620e-5353.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U9CLR6_EMIHU6.920e-2234.29Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S0XEC2_9STRA1.690e-1946.90Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
R1ESG5_EMIHU5.230e-1834.50PPR_long domain-containing protein n=1 Tax=Emilian... [more]
A0A0G4F8K7_VITBC2.510e-1430.93Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
R1DCP2_EMIHU6.240e-1038.05PPR_long domain-containing protein (Fragment) n=1 ... [more]
A0A7S2E620_9STRA4.370e-837.78Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 24..133
e-value: 9.8E-12
score: 44.7
coord: 386..497
e-value: 1.3E-6
score: 28.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..186
e-value: 1.9E-26
score: 95.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 298..407
e-value: 1.7E-19
score: 72.5
coord: 408..502
e-value: 4.2E-13
score: 51.5
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 318..357
e-value: 5.6E-4
score: 19.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 84..116
e-value: 0.0017
score: 16.4
coord: 49..82
e-value: 1.1E-5
score: 23.3
coord: 333..360
e-value: 6.4E-4
score: 17.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 46..80
score: 11.181
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 81..115
score: 9.832
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 412..446
score: 8.988
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 9..43
score: 6.96
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 330..360
score: 8.725
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 369..401
score: 8.649
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 447..481
score: 7.596
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 6..133
coord: 315..500

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6683contigM-pyrifera_M_contig6683:325..7170 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6683.16182.1mRNA_M-pyrifera_M_contig6683.16182.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6683 310..7170 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6683.16182.1 ID=prot_M-pyrifera_M_contig6683.16182.1|Name=mRNA_M-pyrifera_M_contig6683.16182.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=502bp
MVARRDSPDSETWLLLLNAVGTADSLDKAVALMERSRAEGNGSEINELTY
SALLGACGRAKKLARAFRIVQGMRDTGVKPTESTYLALMEVCRHSRDSKA
AVEVFEAMETEGVRPGVRSYTSLLKVISEENNLRSRAIRRARVLETRASS
ATTASAAAAAPPVSPSPSDAIAGSAAEAVGRAAERSSEKPRSTGAAEVFA
AHDSGLRASAAGARDDVSVGGATAAAAAAAAEAMAAATTTAAAPSVESRP
ATAPAPTVADAARASTASSATTAATAAPPPPAVAVAASSSPVPMFLPDMA
SSTSENPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRA
LGVVRLMVDDDQGGGLQPDAVTYTSLIKAAARASPPRVEEAEEIYVTMQQ
RTNHFSTFARPTEVTYAHLMMASVMSGNFSRALEVWREQLAAGVAPGARS
TRAALAACAGAGNIDIALKVYGMMRNAAIRPENRSLLDLVKLCRASGMPE
VA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033443PPR_long
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat