prot_M-pyrifera_M_contig6667.16154.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6667.16154.1
Unique Nameprot_M-pyrifera_M_contig6667.16154.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length442
Homology
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BLAST of mRNA_M-pyrifera_M_contig6667.16154.1 vs. uniprot
Match: D8LHW1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHW1_ECTSI)

HSP 1 Score: 325 bits (833), Expect = 1.720e-103
Identity = 222/460 (48.26%), Postives = 268/460 (58.26%), Query Frame = 0 
Query:    1 MSVRSADTERERQRALTALVAAYPAPASPPWPSNRKTQTLDNSSSRYRSSTNXXXXXSSSDSQHLRRDEGKCDATYSYDGATTTTTLDGSDALMGVAEQVLNWSGTGGRREREQRRLDMCASTWKSVESMARTLAAGQSVVSTIVKCYSMPSLGRRSDRGSVAR----RSGLAATEMMHTSLLSERLAAEGLAIFRRLAQAPPTQPDGLYINSSKIPEAAKALDPGLDDAAVTAWMSANGFQEGTGTTTSPASAEALSWTEYRRALSELCPAFGRFGISTCTDD-----APTPGRTXXXXXXXXXXXXXXXRADIPSENKHSTFGDGSYCNPW-GSFGRSAGGVAPR------SLTGTRSRHFEAGRRGN-PPRSPGADSFHALRRKRHAAVSLDYEAITRELPQQVMPPLDPCILLEHIKEQARLDRKNPASDIGG-SSLSALGPHERLLHMTLQKAQV 442
            MS RSADT RER R +TAL+AA     S PW  + K+++ +++S+  R  +           +    D    D T + D   TT   DG D L+ V +++L+  G     + E   LD+C+STW+SVE+MAR LA GQSVVSTI +CY +P LGR +    VA     ++  A TE MH+ LLS R AA+ LAIFRRL QAP T PD  +INSSK+PEAAKALDPGLDDA + AWM ANGF++       P S EALSWTEYR+ALSELCPAF R GIS  T         TP  T                A  PS   H         +PW  +  R+    +P        L      H   GR GN PPRSPGADS+  LRRKRHAAVSLDYEAITRE PQ VMPPLDP IL++HIK Q R DRKNP  + GG SSL  L  HERLL + L+K QV
Sbjct:    1 MSARSADTARERGRTVTALLAASATTPSNPWSRSHKSRSFNDNSNNIRGGSYAVGYR-----RPTTTDPAADDQTTTTDCGETTLG-DGDDDLVRVVDRLLSSKG-----QDEGDSLDLCSSTWQSVETMARALATGQSVVSTISRCYRLPGLGRNNSGPQVAEAVRCKARRAGTEAMHSLLLSGRFAAKALAIFRRLGQAPLTHPDSFFINSSKLPEAAKALDPGLDDATIRAWMKANGFEQQA--RPQPDSLEALSWTEYRQALSELCPAFRRHGISPTTSTERNTAVSTPIDTKHIGNGGGSGGLALS-ASCPSFTDH---------DPWEAAVDRTPACPSPARPRRRAGLEDDGDTHAVGGRLGNCPPRSPGADSYGVLRRKRHAAVSLDYEAITRERPQ-VMPPLDPSILVDHIKAQGRRDRKNPGGEEGGRSSLWTLSTHERLLKIPLEKEQV 436
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6667.16154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHW1_ECTSI1.720e-10348.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..442
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6667contigM-pyrifera_M_contig6667:2746..11251 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6667.16154.1mRNA_M-pyrifera_M_contig6667.16154.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6667 2746..11251 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6667.16154.1 ID=prot_M-pyrifera_M_contig6667.16154.1|Name=mRNA_M-pyrifera_M_contig6667.16154.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=442bp
MSVRSADTERERQRALTALVAAYPAPASPPWPSNRKTQTLDNSSSRYRSS
TNNSNGGSSSDSQHLRRDEGKCDATYSYDGATTTTTLDGSDALMGVAEQV
LNWSGTGGRREREQRRLDMCASTWKSVESMARTLAAGQSVVSTIVKCYSM
PSLGRRSDRGSVARRSGLAATEMMHTSLLSERLAAEGLAIFRRLAQAPPT
QPDGLYINSSKIPEAAKALDPGLDDAAVTAWMSANGFQEGTGTTTSPASA
EALSWTEYRRALSELCPAFGRFGISTCTDDAPTPGRTSADTYRDETSSPQ
RRRADIPSENKHSTFGDGSYCNPWGSFGRSAGGVAPRSLTGTRSRHFEAG
RRGNPPRSPGADSFHALRRKRHAAVSLDYEAITRELPQQVMPPLDPCILL
EHIKEQARLDRKNPASDIGGSSLSALGPHERLLHMTLQKAQV
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