prot_M-pyrifera_M_contig6642.16111.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6642.16111.1
Unique Nameprot_M-pyrifera_M_contig6642.16111.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length129
Homology
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BLAST of mRNA_M-pyrifera_M_contig6642.16111.1 vs. uniprot
Match: A0A6H5KCZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ8_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.620e-8
Identity = 66/181 (36.46%), Postives = 86/181 (47.51%), Query Frame = 0 
Query:    5 RARRLAQREEEEMNACTFQPSLPRR----PANASMVARTIGS------------------FSSETLIDGGGGGVXXXXRLGG-------------------AGRHHASAPRSGRVNGAASSSCQS---------------GEAVGRRLFEESKRLRERRFEGEERKRMTQEEAFARTCTFE 129
            RAR+LAQREE+E+  CTFQP++P R    P++ + VA  IG+                    + ++ D GGG  XXXX                       AG   A  PRS  V+    SS  S               G  V +RLF+E++RL ERRFEG+ERK M  EE +ARTCTF+
Sbjct:  273 RARKLAQREEQELKDCTFQPNVPPRGALVPSSVTRVAEPIGNGHDCVGTSSSCKPVENDDVGNGSVGDAGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEGTAVGPRS--VDKETRSSVSSRGVAVSPPSQGRGCPGNNVMQRLFDETRRLDERRFEGQERKNMAAEEEYARTCTFQ 451
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BLAST of mRNA_M-pyrifera_M_contig6642.16111.1 vs. uniprot
Match: D7G313_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G313_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 1.470e-7
Identity = 64/179 (35.75%), Postives = 83/179 (46.37%), Query Frame = 0 
Query:    5 RARRLAQREEEEMNACTFQPSLPRRPA----NASMVARTIG---------------------------SFSSETLIDGGG-----GGVXXXXRLGGA----GRHHASAPRSGRVNGAASSSCQSGEAVG--------------RRLFEESKRLRERRFEGEERKRMTQEEAFARTCTFE 129
            RAR+LAQREE+E+  CTFQP++P R A    + +  A  IG                           +   +  +D GG     GG XXXX         G   A+ PRS       + SC S  AV               +RLF+E++RL ERRFEG+ERK M  EE +ARTCTF+
Sbjct:  271 RARKLAQREEQELRDCTFQPNVPLRGALVSGSVTRAAEPIGHGHDCVGRSSSCKPVENDDEGNGSGGNACGGDVHVDAGGTCGVNGGXXXXXXXXXXXXXXGEGTAAGPRSVEKE---TRSCMSSRAVSSPSQGRGCPGNNVVQRLFDETRRLDERRFEGQERKNMAAEEEYARTCTFQ 446
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6642.16111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KCZ8_9PHAE1.620e-836.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G313_ECTSI1.470e-735.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6642contigM-pyrifera_M_contig6642:259..645 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6642.16111.1mRNA_M-pyrifera_M_contig6642.16111.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6642 259..645 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6642.16111.1 ID=prot_M-pyrifera_M_contig6642.16111.1|Name=mRNA_M-pyrifera_M_contig6642.16111.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=129bp
MTTRRARRLAQREEEEMNACTFQPSLPRRPANASMVARTIGSFSSETLID
GGGGGVGGGARLGGAGRHHASAPRSGRVNGAASSSCQSGEAVGRRLFEES
KRLRERRFEGEERKRMTQEEAFARTCTFE
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