prot_M-pyrifera_M_contig66400.16109.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig66400.16109.1
Unique Nameprot_M-pyrifera_M_contig66400.16109.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length105
Homology
BLAST of mRNA_M-pyrifera_M_contig66400.16109.1 vs. uniprot
Match: A0A6H5JJN5_9PHAE (USP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJN5_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 6.510e-37
Identity = 71/100 (71.00%), Postives = 82/100 (82.00%), Query Frame = 0
Query:    3 QPPNALVVHLKRFVFARKASKVKHHVQFGEKLELRVSGPERSALYDLTGVVVHAGGSMSSGHYYAYVRSSSGIWAQMDDTSVSKVRALWVLSRLCGLTFF 102
            +PPNALV+ LKRFVF RKASK+K H+QF + L L VSGPERSALYDLTGVVVHAGGSMSSGHYYAYVRS +G+WA+MDD SVSKV+   VL     + F+
Sbjct:  486 KPPNALVLQLKRFVFTRKASKIKDHIQFADVLNLSVSGPERSALYDLTGVVVHAGGSMSSGHYYAYVRSCAGMWARMDDCSVSKVKRETVLRDQAYVLFY 585          
BLAST of mRNA_M-pyrifera_M_contig66400.16109.1 vs. uniprot
Match: D8LD98_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD98_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 1.990e-28
Identity = 61/100 (61.00%), Postives = 73/100 (73.00%), Query Frame = 0
Query:    3 QPPNALVVHLKRFVFARKASKVKHHVQFGEKLELRVSGPERSALYDLTGVVVHAGGSMSSGHYYAYVRSSSGIWAQMDDTSVSKVRALWVLSRLCGLTFF 102
            +PPNALV  LKRF F     KVK H+ FG+KL L VSGPER A YDLTGVVVH+G +MSSGHYYAYVRSS+G WA+M+D+ V+KV    VL     + F+
Sbjct:  363 KPPNALVFQLKRFGFTNGPRKVKDHISFGDKLNLEVSGPERWANYDLTGVVVHSGKTMSSGHYYAYVRSSAGSWARMNDSVVTKVTLDTVLRDKAYVLFY 462          
BLAST of mRNA_M-pyrifera_M_contig66400.16109.1 vs. uniprot
Match: A0A6H5JKG0_9PHAE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG0_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 1.560e-26
Identity = 54/84 (64.29%), Postives = 65/84 (77.38%), Query Frame = 0
Query:    3 QPPNALVVHLKRFVFARKASKVKHHVQFGEKLELRVSGPERSALYDLTGVVVHAGGSMSSGHYYAYVRSSSGIWAQMDDTSVSK 86
            +PPNALV  LKRF F     KV  H+ FG+KL L VSGPER   YDLTGVV+H+G +MSSGHYYAYVRSS+G WA+M+D+ V+K
Sbjct:  424 KPPNALVFQLKRFGFTNGPRKVNDHISFGDKLNLEVSGPERWTNYDLTGVVIHSGKTMSSGHYYAYVRSSAGCWARMNDSVVTK 507          
BLAST of mRNA_M-pyrifera_M_contig66400.16109.1 vs. uniprot
Match: A0A835YLY7_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY7_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.770e-26
Identity = 49/102 (48.04%), Postives = 71/102 (69.61%), Query Frame = 0
Query:    1 LHQPPNALVVHLKRFVFARKASKVKHHVQFGEKLELRVSGPERSALYDLTGVVVHAGGSMSSGHYYAYVRSSSGIWAQMDDTSVSKVRALWVLSRLCGLTFF 102
            +H  PNALV+HLKRF + R+++K++ HV + E L+L+VSGPE+   YDL GVVVH GG+M  GHY+AY+R+S+ +W +MDD  V   R    L +   + F+
Sbjct:  214 IHTAPNALVLHLKRFAYGRQSTKIRRHVAYPEHLDLKVSGPEKRVGYDLCGVVVHEGGTMQFGHYFAYIRASNKLWYRMDDAHVKSTRKSRALEQQAYMLFY 315          
BLAST of mRNA_M-pyrifera_M_contig66400.16109.1 vs. uniprot
Match: UPI0002C3533B (ubiquitin carboxyl-terminal hydrolase 23 isoform X1 n=2 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0002C3533B)

HSP 1 Score: 92.0 bits (227), Expect = 1.640e-19
Identity = 49/106 (46.23%), Postives = 66/106 (62.26%), Query Frame = 0
Query:    1 LHQPPNALVVHLKRFVFARKASKVKHHVQFGEKLELR--VSGP--ERSALYDLTGVVVHAGGSMSSGHYYAYVRSSSGIWAQMDDTSVSKVRALWVLSRLCGLTFF 102
            +H+PP+ L +HLKRF       K+   VQFG  L+LR  VSGP  E    Y L GV+VH G S  SGHYY +VR+S+GIW  +DD +V +VR + VL +   + F+
Sbjct:  305 IHKPPSVLTIHLKRFRAHDPGQKINKEVQFGPTLDLRPFVSGPYPEGDLKYTLYGVLVHCGASTYSGHYYCFVRTSTGIWHSLDDNNVRQVREMTVLQQKAYMLFY 410          
BLAST of mRNA_M-pyrifera_M_contig66400.16109.1 vs. uniprot
Match: A0A2P6RI72_ROSCH (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6RI72_ROSCH)

HSP 1 Score: 91.3 bits (225), Expect = 3.060e-19
Identity = 49/106 (46.23%), Postives = 66/106 (62.26%), Query Frame = 0
Query:    1 LHQPPNALVVHLKRFVFARKASKVKHHVQFGEKLELR--VSG--PERSALYDLTGVVVHAGGSMSSGHYYAYVRSSSGIWAQMDDTSVSKVRALWVLSRLCGLTFF 102
            +H+PP+ L +HLKRF       K+   VQFG  L+LR  VSG  PE    Y L GV+VH G S  SGHYY +VR+S+GIW  +DD +V +VR + VL +   + F+
Sbjct:  312 IHKPPSVLSIHLKRFRAYDPGQKINKEVQFGPTLDLRPFVSGAYPEGDLKYTLYGVLVHCGASTYSGHYYCFVRTSTGIWHSLDDNNVRQVREMTVLQQKAYMLFY 417          
BLAST of mRNA_M-pyrifera_M_contig66400.16109.1 vs. uniprot
Match: A0A7S1GCT1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCT1_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 4.860e-18
Identity = 50/113 (44.25%), Postives = 66/113 (58.41%), Query Frame = 0
Query:    1 LHQPPNALVVHLKRFVFARKA-SKVKHHVQFGEKLELR--VSGPERSAL-----YDLTGVVVHAGGSMSSGHYYAYVRSSSGIWAQMDDTSVSKVRALWVLSRLCGLTFFFMR 105
            +H PP  LV+HLKRF F     SK+ HH++F +KL L   ++   R        Y+L GVVVHAG S  SGHYYAYVR++SG W  MDD+ V +V    V +    + F+  R
Sbjct:   34 VHHPPLCLVLHLKRFAFNMFGPSKIGHHIEFSDKLNLGEYLTDVGRQMFGTNVEYELFGVVVHAGHSQHSGHYYAYVRNASGAWHNMDDSDVRRVSDRAVFAERVYMLFYVSR 146          
BLAST of mRNA_M-pyrifera_M_contig66400.16109.1 vs. uniprot
Match: UPI001652D0DC (ubiquitin carboxyl-terminal hydrolase 23-like n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI001652D0DC)

HSP 1 Score: 87.4 bits (215), Expect = 6.850e-18
Identity = 48/106 (45.28%), Postives = 64/106 (60.38%), Query Frame = 0
Query:    1 LHQPPNALVVHLKRFVFARKASKVKHHVQFGEKLELR--VSGPERSAL-YDLTGVVVHAGGSMSSGHYYAYVRSSSGIWAQMDDTSVSKVRALWVLSRLCGLTFFF 103
            +H+PPN L VHLKRF       K+   +QFG  L+L+  V+GP    L Y L GV+VHAG S  SGHYY +VR+SSG+W  +DD  V +V    V  +   + F+F
Sbjct:  319 IHKPPNVLTVHLKRFGSHMSGQKIDKKIQFGPTLDLKPFVTGPYDGDLKYTLYGVLVHAGWSTHSGHYYCFVRTSSGMWYSLDDNRVYQVSEKKVFEQKAYMLFYF 424          
BLAST of mRNA_M-pyrifera_M_contig66400.16109.1 vs. uniprot
Match: A0A5N6LS51_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LS51_9ASTR)

HSP 1 Score: 87.4 bits (215), Expect = 6.980e-18
Identity = 47/106 (44.34%), Postives = 65/106 (61.32%), Query Frame = 0
Query:    1 LHQPPNALVVHLKRFVFARKASKVKHHVQFGEKLELR--VSGP-ERSALYDLTGVVVHAGGSMSSGHYYAYVRSSSGIWAQMDDTSVSKVRALWVLSRLCGLTFFF 103
            +++PPN L VHLKRF       K+   +QFG  L+L+  V+GP +    Y L GV+VHAG S  SGHYY +VR+SSG+W  +DD  VS+V    V  +   + F+F
Sbjct:  317 IYKPPNVLTVHLKRFGSHISGQKIDKKIQFGHTLDLKPFVTGPYDEDLKYTLYGVLVHAGWSTHSGHYYCFVRTSSGMWYALDDNQVSQVSEKKVFEQKAYMLFYF 422          
BLAST of mRNA_M-pyrifera_M_contig66400.16109.1 vs. uniprot
Match: A0A250X3I7_9CHLO (USP domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X3I7_9CHLO)

HSP 1 Score: 86.3 bits (212), Expect = 1.760e-17
Identity = 47/115 (40.87%), Postives = 69/115 (60.00%), Query Frame = 0
Query:    1 LHQPPNALVVHLKRFVFARKASKVKHHVQFGEKLELR-------VSG---PERSALYDLTGVVVHAGGSMSSGHYYAYVRSSSGIWAQMDDTSVSKVRALWVLSRLCGLTFFFMR 105
            +H+PPN L VHLKRF F    SK+   V++   ++L        ++G   P  S +YDL GV+VH G S+ SGHYY++VR  +G+W + DDTSV +V    VL++   + F+  R
Sbjct:  288 VHEPPNILTVHLKRFEFGSFGSKISKMVEYDLAMDLAPFMSSLGLTGKGQPSGSQMYDLYGVLVHQGHSVHSGHYYSFVRGPTGLWYRCDDTSVGQVGERMVLAQQAYILFYIRR 402          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66400.16109.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJN5_9PHAE6.510e-3771.00USP domain-containing protein n=2 Tax=Ectocarpus T... [more]
D8LD98_ECTSI1.990e-2861.00Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ecto... [more]
A0A6H5JKG0_9PHAE1.560e-2664.29Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ecto... [more]
A0A835YLY7_9STRA1.770e-2648.04USP domain-containing protein (Fragment) n=1 Tax=T... [more]
UPI0002C3533B1.640e-1946.23ubiquitin carboxyl-terminal hydrolase 23 isoform X... [more]
A0A2P6RI72_ROSCH3.060e-1946.23Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Rosa... [more]
A0A7S1GCT1_9STRA4.860e-1844.25Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
UPI001652D0DC6.850e-1845.28ubiquitin carboxyl-terminal hydrolase 23-like n=1 ... [more]
A0A5N6LS51_9ASTR6.980e-1844.34Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A250X3I7_9CHLO1.760e-1740.87USP domain-containing protein n=1 Tax=Chlamydomona... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 1..88
e-value: 3.4E-20
score: 72.6
NoneNo IPR availableGENE3D3.90.70.10coord: 1..101
e-value: 3.0E-27
score: 97.8
NoneNo IPR availablePANTHERPTHR24006FAMILY NOT NAMEDcoord: 3..97
NoneNo IPR availablePANTHERPTHR24006:SF748coord: 3..97
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00973USP_2coord: 47..65
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..105
score: 20.891
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 2..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66400contigM-pyrifera_M_contig66400:531..1224 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66400.16109.1mRNA_M-pyrifera_M_contig66400.16109.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig66400 531..1224 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig66400.16109.1 ID=prot_M-pyrifera_M_contig66400.16109.1|Name=mRNA_M-pyrifera_M_contig66400.16109.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp
LHQPPNALVVHLKRFVFARKASKVKHHVQFGEKLELRVSGPERSALYDLT
GVVVHAGGSMSSGHYYAYVRSSSGIWAQMDDTSVSKVRALWVLSRLCGLT
FFFMR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf