prot_M-pyrifera_M_contig66347.16097.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig66347.16097.1
Unique Nameprot_M-pyrifera_M_contig66347.16097.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length194
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66347.16097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 144..166
e-value: 0.019
score: 24.1
coord: 61..84
e-value: 0.0026
score: 27.0
coord: 116..139
e-value: 0.033
score: 23.3
coord: 89..111
e-value: 0.0029
score: 26.8
coord: 5..28
e-value: 5.6
score: 15.5
coord: 171..194
e-value: 0.0054
score: 26.0
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 63..84
e-value: 5.3E-5
score: 23.5
coord: 171..194
e-value: 3.8E-4
score: 20.8
coord: 116..139
e-value: 8.4E-4
score: 19.7
coord: 89..111
e-value: 5.1E-5
score: 23.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 173..194
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 118..139
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 63..84
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 146..166
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 91..111
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 144..171
score: 12.196
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 171..194
score: 13.63
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 61..89
score: 11.905
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 89..116
score: 12.445
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 116..144
score: 12.549
NoneNo IPR availableGENE3D3.30.160.60coord: 1..86
e-value: 3.1E-6
score: 29.1
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 144..166
e-value: 5.4E-4
score: 20.6
NoneNo IPR availableGENE3D3.30.160.60coord: 116..138
e-value: 1.0E-5
score: 27.2
NoneNo IPR availableGENE3D3.30.160.60coord: 143..169
e-value: 2.8E-5
score: 25.7
NoneNo IPR availableGENE3D3.30.160.60coord: 170..194
e-value: 2.3E-5
score: 26.3
NoneNo IPR availableGENE3D3.30.160.60coord: 88..115
e-value: 4.9E-7
score: 31.3
NoneNo IPR availablePANTHERPTHR24409FAMILY NOT NAMEDcoord: 90..194
coord: 51..139
NoneNo IPR availablePANTHERPTHR24409:SF349WORNIUcoord: 51..139
NoneNo IPR availablePANTHERPTHR24409:SF349WORNIUcoord: 90..194
coord: 4..112
NoneNo IPR availablePANTHERPTHR24409FAMILY NOT NAMEDcoord: 4..112
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 97..153
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 62..111
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 144..191
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 4..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66347contigM-pyrifera_M_contig66347:720..1301 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66347.16097.1mRNA_M-pyrifera_M_contig66347.16097.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig66347 720..1301 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig66347.16097.1 ID=prot_M-pyrifera_M_contig66347.16097.1|Name=mRNA_M-pyrifera_M_contig66347.16097.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=194bp
NERRFGCDHCEYRAKKRSVLHSHILRKHRPKVSITCNLCLRQVSLVSWPC
HLRERHRGVSLLCEACGKEFKTSDGLRSHMRSKHEGIRYSCPDCSKTFSD
PSGLCYHKAIHAGVKHECMECGKKYSYRSGLLTHQRSAHLGLRYSCPDCS
KTFSSLSGLRFHTAAHAGVKHECAECGKKFSYRSGLLHHQRGVH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf