prot_M-pyrifera_M_contig66343.16094.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig66343.16094.1
Unique Nameprot_M-pyrifera_M_contig66343.16094.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length324
Homology
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BLAST of mRNA_M-pyrifera_M_contig66343.16094.1 vs. uniprot
Match: A0A2P6V2J8_9CHLO (Histone H4 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V2J8_9CHLO)

HSP 1 Score: 73.2 bits (178), Expect = 1.130e-10
Identity = 88/304 (28.95%), Postives = 121/304 (39.80%), Query Frame = 0 
Query:    5 EVGGXXXXEAGGRKKKEKMVEAPFDPKVVSALEMMGLSKERAIRGAWLGRDEETGEQSEARALEWLEAHEGDENLDDPFLVPKSEVEASLPLEERLRAAKELIARKRLERAEEEXXXXXXXXXXXXXXXXXLAAAREELDALQRKREAEXXXXXXXEAAEALHRQRVMLLRDRVERALRNGNEAKAAELKQQLRELEEGKATPALDRIS------DVREKFHRAIRAMKTFHK-DDAGLKAI-KAIRTICGNAQSKSAEDPKFLTLPLHTPGVQRRLVPVMGAIAFLQAAGFQKTEDGNALVLP 300
            E G      +GG  + E+MV A      +  +E MG    RA R  +      +GE  EA AL WLE H+GD ++D+P +VPKS  +  L  EE   AA ELI R R  R  + X                LA A  + D L+ KR  E    XXX                      + G   +  E                  +        +V EK    +  MK  H   D G+K   + +  +CGN  +   ED KF  + L  P +Q+R+    GA+ FL  AGFQ+   G  L +P
Sbjct:  206 EAGDARPGSSGGGGEPEEMVPAEVHADTLKQMEEMGFPTARATRALY-----HSGESLEA-ALGWLEEHQGDADIDEPLMVPKSAPKKKLTPEEAKAAAAELIKRARERRERDXXEAERLREQERIRAGKELALAARQEDELRLKRMIEARRLXXXXXXXXXXXXXXXXXXXXXXXXXKLGLPEELTEXXXXXXXXXXXXXXXXXXKRKLPVKPVEVGEKMRNILVDMKKAHGGQDEGVKTCWQTLLKMCGNVYANPGED-KFRRIRLTNPAIQQRVAAFTGAVDFLLLAGFQRDASGEGLEMP 502
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BLAST of mRNA_M-pyrifera_M_contig66343.16094.1 vs. uniprot
Match: E1ZIQ9_CHLVA (UBA domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZIQ9_CHLVA)

HSP 1 Score: 58.9 bits (141), Expect = 4.440e-6
Identity = 87/302 (28.81%), Postives = 121/302 (40.07%), Query Frame = 0 
Query:   14 AGGRKKKEKMVEAPFDPKVVSALEMMGLSKERAIRGAWLGRDEETGEQSEARALEWLEAHEGDENLDDPFLVPKSEVEASLPLEERLRAAKELIARKRLERAEEEXXXXXXXXXXXXXXXXXLAAAREELDALQRKREAEXXXXXXXEAAEALHRQRVMLLRDRVERALRNGNEAKAAELKQQLRELEEGKATPALDRIS-------------DVREKFHRAIRAMKTFH--KDDAGLKAIKAIRTICGNAQSKSAEDPKFLTLPLHTPGVQRRLVPVMGAIAFLQAAGFQKTEDGNALVLP 300
            AGG  + E++V A  +  ++  +E MG    RA R  +       GE  EA A+ WLE H+GD +LD+P LVPKS+ +  L  EE    A EL+ + R       XX               LA A  + + L       XXXXXXX                      R G       L ++L E                           +V EK    +  MK  H  +DDA     + +  +CGN  +   ED KF  + L  P +Q+R+    GA+ FL  AGFQ+   G  L +P
Sbjct:   97 AGGGSQAEELVPAEVNADLLKQMEEMGFPAARATRALY----HSGGENLEA-AVGWLEEHQGDADLDEPLLVPKSQPKKKLSPEEAKAQAAELVRKVRERXXXXXXXTERLREQERIRAGKELALAARQEEXLXXXXMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLG-------LPEELTEXXXXXXXXXXXXXXXXXXXRRLPIKPVEVGEKMRTLLVDMKKAHPGQDDALKTCWQTLLKMCGNIYANPGED-KFRRVRLTNPAIQQRVAAFTGAVDFLHLAGFQRDAGGENLEMP 385
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BLAST of mRNA_M-pyrifera_M_contig66343.16094.1 vs. uniprot
Match: A0A250XFS3_9CHLO (UBA domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XFS3_9CHLO)

HSP 1 Score: 55.5 bits (132), Expect = 6.120e-5
Identity = 81/290 (27.93%), Postives = 132/290 (45.52%), Query Frame = 0 
Query:   22 KMVEAPFDPKVVSALEMMGLSKERAIRGAWLGRDEETGEQSEARALEWLEAHEGDENLDDPFLVPKSEVEASLPLEERLRAAKELIARKRLERAEEEXXXXXXXXXXXXXXXXXLAAAREELDALQRKREAEXXXXXXX-------------EAAEALHRQRVMLLRDRVERALRNGNEAKAAELKQQLRELEEGKATPALDRISDVREKFHRAIRAMK-----TFHKDDAGLKAIKAIRTICGNAQSKSAEDPKFLTLPLHTPGVQRRLVPVMGAIAFLQAAGFQKTED 293
            +MV A  D  ++  +E MG S  RA R         +G  S   A+ WL+ HE D +LD+P L+PK  ++  L  EE  + A+E I + + +R    XXXXX            + A + + D   RKR   XXXXXXX             E        ++ L  +  E   R    A+A ++++Q +E EEGK      +   V +K  + +  MK     +  +++    A+  +    GN  S+  E+ KF  + L     Q+R+  + G++  L+ AGFQ+ ++
Sbjct:  115 EMVPAVVDESMLKEMEGMGFSAPRATRALHF-----SGNSSVEGAINWLDQHEADIDLDEPLLIPKESLKPKLSPEEARKKAEEAIRKAKEKRXXXXXXXXXVRELERIRAGKEMLAMKAKADEADRKRXXXXXXXXXXXXXXXXXXIXAKLEXXXXXXXXQMGLPEELTEEEKR----AEAEKVEKQRKE-EEGKKVFTFVKPISVIDKVRKTLVDMKKASSASSAEEERFKTAVSTMLKYVGNVASQPDEE-KFRNIKLSNAAFQQRVASLEGSLVVLEQAGFQRVDE 393
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66343.16094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2P6V2J8_9CHLO1.130e-1028.95Histone H4 n=1 Tax=Micractinium conductrix TaxID=5... [more]
E1ZIQ9_CHLVA4.440e-628.81UBA domain-containing protein n=1 Tax=Chlorella va... [more]
A0A250XFS3_9CHLO6.120e-527.93UBA domain-containing protein n=1 Tax=Chlamydomona... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 183..203
NoneNo IPR availableCOILSCoilCoilcoord: 100..169
NoneNo IPR availableGENE3D1.10.8.10coord: 13..88
e-value: 3.0E-6
score: 29.0
NoneNo IPR availableGENE3D1.20.58.2190coord: 219..320
e-value: 1.2E-10
score: 42.8
NoneNo IPR availablePANTHERPTHR46713FAMILY NOT NAMEDcoord: 14..323
NoneNo IPR availablePANTHERPTHR46713:SF1F13M7.16 PROTEINcoord: 14..323
IPR018997PUB domainPFAMPF09409PUBcoord: 236..303
e-value: 7.2E-7
score: 29.1
IPR036339PUB-like domain superfamilySUPERFAMILY143503PUG domain-likecoord: 231..313
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 19..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66343contigM-pyrifera_M_contig66343:72..1226 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66343.16094.1mRNA_M-pyrifera_M_contig66343.16094.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig66343 72..1226 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig66343.16094.1 ID=prot_M-pyrifera_M_contig66343.16094.1|Name=mRNA_M-pyrifera_M_contig66343.16094.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=324bp
GGGGEVGGGGVGEAGGRKKKEKMVEAPFDPKVVSALEMMGLSKERAIRGA
WLGRDEETGEQSEARALEWLEAHEGDENLDDPFLVPKSEVEASLPLEERL
RAAKELIARKRLERAEEEKRLAREREIRRREEGRKLAAAREELDALQRKR
EAEKRAREKKEAAEALHRQRVMLLRDRVERALRNGNEAKAAELKQQLREL
EEGKATPALDRISDVREKFHRAIRAMKTFHKDDAGLKAIKAIRTICGNAQ
SKSAEDPKFLTLPLHTPGVQRRLVPVMGAIAFLQAAGFQKTEDGNALVLP
DPAAHPDIATNLERASAALQAAID
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018997PUB_domain
IPR036339PUB-like_dom_sf
IPR009060UBA-like_sf