prot_M-pyrifera_M_contig6619.16066.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6619.16066.1
Unique Nameprot_M-pyrifera_M_contig6619.16066.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length281
Homology
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BLAST of mRNA_M-pyrifera_M_contig6619.16066.1 vs. uniprot
Match: D8LKN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKN4_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 2.020e-16
Identity = 59/101 (58.42%), Postives = 73/101 (72.28%), Query Frame = 0 
Query:    1 LAQQSLNAKHEEESQRLQGVIESLRLEGASRDGAVRQAE--QASVDLEEQVEGLLRDAGTLEHRLVGAQQERDEAVARCSDLEGEVQRL---SVEARDAAE 96
            LAQ++L A H+EE  RL+ V+ESLR E  S   A RQA   +A+   +EQVE  LRDAG+LEHRLVG QQERDEAVAR S LE + +RL   +VE+R+AAE
Sbjct:   89 LAQENLKASHQEECARLEAVVESLRQE-VSASEAQRQASAAEAASKSQEQVESFLRDAGSLEHRLVGVQQERDEAVARASQLEEQARRLEEAAVESREAAE 188
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BLAST of mRNA_M-pyrifera_M_contig6619.16066.1 vs. uniprot
Match: A0A6H5KSR4_9PHAE (GRIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSR4_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 1.810e-15
Identity = 59/103 (57.28%), Postives = 73/103 (70.87%), Query Frame = 0 
Query:    1 LAQQSLNAKHEEESQRLQGVIESLRLEGASRDGAVRQAE--QASVDLEEQVEGLLRDAGTLEHRLVGAQQERDEAVARCSDLEGEVQRLS---VEARDAAEGK 98
            LAQ++L A H+EE  RL+ VI+SLR E  S   A RQA   +A+   +EQVE LLRDAG LEHRLVG QQERDEAVA+ S LE + +RL    VE+R+AAE +
Sbjct:  137 LAQENLKALHQEECARLEAVIDSLRQE-ISASEAQRQASAAEAASKSQEQVESLLRDAGLLEHRLVGVQQERDEAVAQASQLEEQARRLEEAVVESREAAEAR 238
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6619.16066.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKN4_ECTSI2.020e-1658.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSR4_9PHAE1.810e-1557.28GRIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 147..209
NoneNo IPR availableCOILSCoilCoilcoord: 217..237
NoneNo IPR availableCOILSCoilCoilcoord: 63..90
NoneNo IPR availableCOILSCoilCoilcoord: 112..132
NoneNo IPR availableCOILSCoilCoilcoord: 245..281
NoneNo IPR availableCOILSCoilCoilcoord: 7..27
NoneNo IPR availableCOILSCoilCoilcoord: 35..55
NoneNo IPR availableGENE3D1.20.5.340coord: 160..255
e-value: 4.5E-6
score: 28.6
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 23..275

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6619contigM-pyrifera_M_contig6619:1033..3109 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6619.16066.1mRNA_M-pyrifera_M_contig6619.16066.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6619 1033..3109 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6619.16066.1 ID=prot_M-pyrifera_M_contig6619.16066.1|Name=mRNA_M-pyrifera_M_contig6619.16066.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=281bp
LAQQSLNAKHEEESQRLQGVIESLRLEGASRDGAVRQAEQASVDLEEQVE
GLLRDAGTLEHRLVGAQQERDEAVARCSDLEGEVQRLSVEARDAAEGKAG
EVGRLEAERESSESLQNLVAESAKERDEALAELGGARAELEMFECRTQEI
AANVAVVERERDEAKAEALALKGELDELRSELEVFESRADGAESRADGAA
ANVAAVEAERDEAVAKVVAAKGELDGLKAALEAFESRADGNAAKVVVVER
ERDAAMAEVVGLKEELEGARAELEREREAVA
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