prot_M-pyrifera_M_contig66129.16053.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig66129.16053.1
Unique Nameprot_M-pyrifera_M_contig66129.16053.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length287
Homology
BLAST of mRNA_M-pyrifera_M_contig66129.16053.1 vs. uniprot
Match: A0M238_GRAFK (Protein containing PKD domains n=1 Tax=Gramella forsetii (strain KT0803) TaxID=411154 RepID=A0M238_GRAFK)

HSP 1 Score: 60.8 bits (146), Expect = 8.000e-7
Identity = 55/173 (31.79%), Postives = 87/173 (50.29%), Query Frame = 0
Query:  123 ASATQVVAGNTLQFTAITVKGKPNFWELQVSPNS-------GKQATFRTFGTFEYTFYDPGQYSV---AVRTCDADNNCVRPVISVTVVDNPDLIPLEASFTGPADA-EVSSDVTFQSTSQGDPASYRWTFPGGSPDFSVSPNGTTSWSEPGTKTVTLEITRGS--ETDTITR 282
            A  T  + G+T+QFT +T K + + +EL+   +S       G  AT  T      T+ +PG Y+V   A R     ++       +T++     IP+E  F+      E    +TF  +S GD  S++WTFPGG+P+ S   N T  ++E G   VTLE+ R    E+++IT+
Sbjct:  138 ADKTSALFGSTVQFTNLT-KNRRSEFELEREEDSYLWEFEGGTPAT-STAENPVVTYPEPGVYNVKLTAHRAAPEHDDIEVKTDYITILA---AIPIEPKFSANITTIEAGEAITFTDSSSGDGDSWKWTFPGGTPETSTEQNPTVVYNEAGVYDVTLEVNRSQDGESESITK 305          
BLAST of mRNA_M-pyrifera_M_contig66129.16053.1 vs. uniprot
Match: A0A4Q3EPM8_9SPHI (Uncharacterized protein (Fragment) n=1 Tax=Sphingobacteriales bacterium TaxID=2044944 RepID=A0A4Q3EPM8_9SPHI)

HSP 1 Score: 57.0 bits (136), Expect = 2.030e-5
Identity = 49/171 (28.65%), Postives = 81/171 (47.37%), Query Frame = 0
Query:  133 TLQFTAITVKGKPNFWELQVSPNSGKQATFRTFG------------TFEYTFYDPGQYSVAVRTCDADNNCVRPVISVTVVDNPDLIPLEASFTGPA----DAEVSSDVTFQSTSQGDPASYRWTFPGGSPDFSVSP-NGTTSWSEPGTKTVTLEITRGSETDTITRDITI 286
            T+  T+ T   K N ++  VS N+    T  T G            T E++F +PG Y++A+ T +++  C     + TV+        + S T P     +  V+   T  +      A+Y W+FPGG+P  S  P  G  +++  G+  +TLE+T    T TIT++IT+
Sbjct:  489 TITNTSNTPLCKTNTYQWAVSYNNTSGCTPNTAGFTYINGTSATSETPEFSFTNPGVYTIALVTKNSNGLCASTAFTQTVIVK---TKPQGSVTAPTAVCQNGSVNPSATIANCYATTAATYSWSFPGGTPSASTLPIPGAITYTTSGSYVITLEVTNECGTTTITKNITV 656          
BLAST of mRNA_M-pyrifera_M_contig66129.16053.1 vs. uniprot
Match: A0A359CS72_9BACT (Uncharacterized protein (Fragment) n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A359CS72_9BACT)

HSP 1 Score: 56.6 bits (135), Expect = 2.790e-5
Identity = 48/156 (30.77%), Postives = 78/156 (50.00%), Query Frame = 0
Query:  128 VVAGNTLQFTAITVKGKPNFWELQVSPNSGKQATFRTFGTFEYTFYDPGQYSVAVRTCDAD-NNCVRPVISVTVVDNPDLIPLEASFTGPAD-AEVSSDVTFQSTSQGDPASYRWTFPGGSPDFSVSPNGTTSWSEPGTKTVTLEITRGSETDTIT 281
            V  G+T+QFT ++  G P+ W       +   ++ +  G     + D G +SV++   +AD ++ V  +  +TV  +     L A F+      E    V F   S G+P ++ W F GG+P  S + N    +S  GT +VTL +T G++TDTIT
Sbjct: 1772 VSEGSTVQFTDLS-SGSPDTWVWTFEGGTPSTSSDQNPGV---VYSDAGTFSVSLTVSNADGSDSVSYMDYITVYSSGGT--LFADFSADQTFIEEGQTVQFSDLSSGNPTAWSWIFDGGTPSSSTAQNPAVVYSTSGTYSVTLIVTDGTDTDTIT 1921          
BLAST of mRNA_M-pyrifera_M_contig66129.16053.1 vs. uniprot
Match: A0A7C4JT48_9BACT (PKD domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7C4JT48_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 4.850e-5
Identity = 44/116 (37.93%), Postives = 60/116 (51.72%), Query Frame = 0
Query:  170 YTFYDPGQYSVAVRTCDADNNCVRPVIS--VTVVDNPDLIPLEASFTG-PADAEVSSDVTFQSTSQGDPASYRWTFPGGSPDFSVSPNGTTSWSEPGTKTVTLEITRGSETDTITR 282
            + +   G Y+V   T  A N C     +  VTVV  P      A+FT  P       +V F STSQG+P S++W FPGGSP  S + N T ++   G  +VTL +T    +DT+TR
Sbjct:  689 HIYAQSGTYTV---TLTATNACGSNTSTKTVTVVGAP-----VANFTASPTSGCAPLNVQFTSTSQGNPTSFQWHFPGGSPSSSTAQNPTVTYDSSGAYSVTLIVTNNLGSDTLTR 796          
BLAST of mRNA_M-pyrifera_M_contig66129.16053.1 vs. uniprot
Match: A0A239LPE6_9BACT (PKD domain-containing protein n=1 Tax=Ekhidna lutea TaxID=447679 RepID=A0A239LPE6_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 5.110e-5
Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 0
Query:  209 LEASFTGPADAEVSSD--VTFQSTSQGDPASYRWTFPGGSPDFSVSPNGTTSWSEPGTKTVTLEITRGSETDTI 280
            LEA+F+   +  V +D  V FQ  S G+P+++ W FPGGSP+ S   N T +++E G K+VTL ++ GSETD +
Sbjct:   30 LEANFSV-VERNVGTDEQVLFQDESTGNPSTWLWEFPGGSPETSTEQNPTVTYAEEGFKSVTLTVSNGSETDMV 102          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66129.16053.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0M238_GRAFK8.000e-731.79Protein containing PKD domains n=1 Tax=Gramella fo... [more]
A0A4Q3EPM8_9SPHI2.030e-528.65Uncharacterized protein (Fragment) n=1 Tax=Sphingo... [more]
A0A359CS72_9BACT2.790e-530.77Uncharacterized protein (Fragment) n=2 Tax=Bactero... [more]
A0A7C4JT48_9BACT4.850e-537.93PKD domain-containing protein n=1 Tax=Bacteroidete... [more]
A0A239LPE6_9BACT5.110e-544.59PKD domain-containing protein n=1 Tax=Ekhidna lute... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022409PKD/Chitinase domainSMARTSM00089PKD_9coord: 118..203
e-value: 0.33
score: 16.3
coord: 210..287
e-value: 0.014
score: 24.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 207..287
e-value: 3.5E-11
score: 45.2
IPR000601PKD domainPFAMPF00801PKDcoord: 220..270
e-value: 2.2E-5
score: 24.2
IPR000601PKD domainPROSITEPS50093PKDcoord: 208..287
score: 13.379
IPR035986PKD domain superfamilySUPERFAMILY49299PKD domaincoord: 216..286
IPR035986PKD domain superfamilySUPERFAMILY49299PKD domaincoord: 118..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66129contigM-pyrifera_M_contig66129:4..952 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66129.16053.1mRNA_M-pyrifera_M_contig66129.16053.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig66129 4..952 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig66129.16053.1 ID=prot_M-pyrifera_M_contig66129.16053.1|Name=mRNA_M-pyrifera_M_contig66129.16053.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=287bp
RRERRRLVQRPAILTRRSHPPRWNHRTDLQVRREQRRRAATEQAAAEGSP
TTTTPAGDDRNTPATQPDPDDTTPAVTTPGTPSTEPGGEPQGETGETTST
TDPDGSTTSTTENTAPLVIQIGASATQVVAGNTLQFTAITVKGKPNFWEL
QVSPNSGKQATFRTFGTFEYTFYDPGQYSVAVRTCDADNNCVRPVISVTV
VDNPDLIPLEASFTGPADAEVSSDVTFQSTSQGDPASYRWTFPGGSPDFS
VSPNGTTSWSEPGTKTVTLEITRGSETDTITRDITIL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022409PKD/Chitinase_dom
IPR013783Ig-like_fold
IPR000601PKD_dom
IPR035986PKD_dom_sf