prot_M-pyrifera_M_contig6612.16052.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6612.16052.1
Unique Nameprot_M-pyrifera_M_contig6612.16052.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length189
Homology
BLAST of mRNA_M-pyrifera_M_contig6612.16052.1 vs. uniprot
Match: D7FMH7_ECTSI (UDENN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH7_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 1.550e-65
Identity = 115/128 (89.84%), Postives = 122/128 (95.31%), Query Frame = 0
Query:   63 LRKASRLA-FSELKHDVREERLYKANAALVVAFEALEVMRERAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSFTEGGAHPLSLLDWSKFQPKQRDGRYAIAP 189
            +RK+SR+A FSELKHDVREERLYKANAAL+VAFEALE MRE+APAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSFT+GGAHPLSLLDWSKFQPK RDGR +  P
Sbjct:  679 VRKSSRMASFSELKHDVREERLYKANAALMVAFEALEAMREKAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSFTDGGAHPLSLLDWSKFQPKHRDGRRSHEP 806          
BLAST of mRNA_M-pyrifera_M_contig6612.16052.1 vs. uniprot
Match: A0A6H5JMA5_9PHAE (UDENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA5_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 3.820e-64
Identity = 117/145 (80.69%), Postives = 130/145 (89.66%), Query Frame = 0
Query:   46 REGAAGDTGDGLSSSGNLRKASRLA-FSELKHDVREERLYKANAALVVAFEALEVMRERAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSFTEGGAHPLSLLDWSKFQPKQRDGRYAIAP 189
            RE A+G  G G+     +RK+SR+A FS+LKHDV+EERLYKANAAL+VAFEAL+ MRE+APAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSF++GGAHPLSLLDWSKFQPK RDGR +  P
Sbjct: 1291 RETASGRIGGGVK----VRKSSRMASFSDLKHDVQEERLYKANAALMVAFEALDAMREKAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSFSDGGAHPLSLLDWSKFQPKHRDGRRSHEP 1431          
BLAST of mRNA_M-pyrifera_M_contig6612.16052.1 vs. uniprot
Match: A0A835ZGT0_9STRA (UDENN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGT0_9STRA)

HSP 1 Score: 122 bits (306), Expect = 8.330e-29
Identity = 68/118 (57.63%), Postives = 81/118 (68.64%), Query Frame = 0
Query:   68 RLAFSELKH-DVREERLYKANAALVVAFEALEVMRERAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSFTEGGAHPLSLLDWSKFQPKQRDGR 184
            R+ FSE    DV EERL  A AAL VAFE +E+MR      EE VYR LI AC RCG+SE+A+ VVEMMM+ GI PDA +S CL+DAF+MD +   G  +PL LLDWSK Q +  DGR
Sbjct: 1185 RVPFSEQGEVDVAEERLAAAKAALGVAFEVVELMRRFRMEVEEGVYRGLIDACVRCGDSERAIQVVEMMMAAGIRPDAAISNCLIDAFSMDKTMAAG--NPLDLLDWSKLQSRGPDGR 1300          
BLAST of mRNA_M-pyrifera_M_contig6612.16052.1 vs. uniprot
Match: A0A7S0C7X1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C7X1_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 5.610e-11
Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = 0
Query:   80 EERLYKANAALVVAFEALEVMRERAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSFTE-GGAHPLSLLDWS 174
            EE    A A LV+AF+ LE+MRER    +   Y+ LI ACGRCG++E+A  ++  M   GIV D +V  CLV AF+ + ++ +  G     L +W+
Sbjct:  181 EEAKATAKAQLVLAFDILEMMRERILKADPEAYQCLIDACGRCGDTERATKLLSRMHEDGIVADGVVYACLVSAFSAESAWKKLMGKKEEDLPEWA 276          
BLAST of mRNA_M-pyrifera_M_contig6612.16052.1 vs. uniprot
Match: A0A448ZR92_9STRA (UDENN domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZR92_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.120e-6
Identity = 31/78 (39.74%), Postives = 49/78 (62.82%), Query Frame = 0
Query:   88 AALVVAFEALEVMRERAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSFTEGGA 165
            A L +AF+ALE+M  R    +  V++SL+ ACGRCGN+++A+A++E+M   G+V D  V    + +FA    + E  A
Sbjct: 1000 AQLDLAFDALEMMETRGLNTDPDVFKSLMEACGRCGNTKRALALIEIMKRDGLVADNDVLIFFMASFAHCRPYEEASA 1077          
BLAST of mRNA_M-pyrifera_M_contig6612.16052.1 vs. uniprot
Match: A0A7S1TYQ9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYQ9_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 2.090e-6
Identity = 33/97 (34.02%), Postives = 51/97 (52.58%), Query Frame = 0
Query:   77 DVREERLYKANAALVVAFEALEVMRERAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSFTEGGAH-PLSLLD 172
            D  EER  K N  L VAFE +E + +   + +   ++SLI ACGRCGN E+A+ V++ +    I     +   L+ AF    +   G  + PL ++D
Sbjct:  934 DAAEERQVKMNMMLEVAFEVIEAVLDLGASLDSHAFQSLIHACGRCGNVERAIKVLDFLEQANIQVTQTLRTALLIAFDRSGNAASGSGNLPLQIVD 1030          
BLAST of mRNA_M-pyrifera_M_contig6612.16052.1 vs. uniprot
Match: A0A7S2Y8L2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y8L2_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 3.620e-6
Identity = 29/80 (36.25%), Postives = 47/80 (58.75%), Query Frame = 0
Query:   80 EERLYKANAALVVAFEALEVMRERAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDS 159
            EE    A A L +AFE L+ +  R    +   Y+SL+ ACGRCG++++A  ++++M   G + D  +  C V AFA ++S
Sbjct:  577 EEAKEVATAQLDLAFEVLKTVSMRKLPADLDSYKSLMEACGRCGDTQRARILIDLMKKDGFILDGEILSCFVAAFAHEES 656          
BLAST of mRNA_M-pyrifera_M_contig6612.16052.1 vs. uniprot
Match: B7FVV2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FVV2_PHATC)

HSP 1 Score: 55.1 bits (131), Expect = 1.710e-5
Identity = 29/80 (36.25%), Postives = 47/80 (58.75%), Query Frame = 0
Query:   80 EERLYKANAALVVAFEALEVMRERAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDS 159
            EE    A+A L +AFEAL  M  R    +   Y+SL+ ACGRCG++E+A+ ++++M   G   D+ +    + AFA + +
Sbjct:  904 EEAKEVASAQLDLAFEALTTMSLRGLKTDSDAYKSLMEACGRCGDTERALKLMQVMKVDGFFADSEILAWFIAAFAQESA 983          
BLAST of mRNA_M-pyrifera_M_contig6612.16052.1 vs. uniprot
Match: A0A7S4AQ15_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AQ15_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 7.570e-5
Identity = 29/76 (38.16%), Postives = 46/76 (60.53%), Query Frame = 0
Query:   80 EERLYKANAALVVAFEALEVMRERAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFA 155
            EE    A A L +AF+ L++M  R    +  V++SL+ ACGRCGN+++A+ ++E M   G+V D  V    + +FA
Sbjct:  706 EEAREVAVAQLDLAFDGLQMMETRGLTTDPDVFKSLMEACGRCGNTKRALELIETMKRDGLVADNDVLVFFMASFA 781          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6612.16052.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FMH7_ECTSI1.550e-6589.84UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JMA5_9PHAE3.820e-6480.69UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835ZGT0_9STRA8.330e-2957.63UDENN domain-containing protein n=1 Tax=Tribonema ... [more]
A0A7S0C7X1_9STRA5.610e-1140.63Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A448ZR92_9STRA1.120e-639.74UDENN domain-containing protein n=1 Tax=Pseudo-nit... [more]
A0A7S1TYQ9_9STRA2.090e-634.02Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2Y8L2_9STRA3.620e-636.25Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
B7FVV2_PHATC1.710e-536.25Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S4AQ15_9STRA7.570e-538.16Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 111..144
e-value: 3.3E-9
score: 34.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 111..140
e-value: 2.3E-5
score: 24.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 108..142
score: 11.279
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 55..172
e-value: 4.2E-11
score: 44.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6612contigM-pyrifera_M_contig6612:1871..4204 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6612.16052.1mRNA_M-pyrifera_M_contig6612.16052.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6612 1871..4204 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6612.16052.1 ID=prot_M-pyrifera_M_contig6612.16052.1|Name=mRNA_M-pyrifera_M_contig6612.16052.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=189bp
PSVESASQSSLPAVVTMSTKGVVHGAGRPSGRDGDVGEQNADSEGREGAA
GDTGDGLSSSGNLRKASRLAFSELKHDVREERLYKANAALVVAFEALEVM
RERAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCL
VDAFAMDDSFTEGGAHPLSLLDWSKFQPKQRDGRYAIAP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf