mRNA_M-pyrifera_M_contig6612.16052.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig6612.16052.1 vs. uniprot
Match: D7FMH7_ECTSI (UDENN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH7_ECTSI) HSP 1 Score: 227 bits (579), Expect = 1.550e-65 Identity = 115/128 (89.84%), Postives = 122/128 (95.31%), Query Frame = 1
Query: 187 LRKASRLA-FSELKHDVREERLYKANAALVVAFEALEVMRERAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSFTEGGAHPLSLLDWSKFQPKQRDGRYAIAP 567
+RK+SR+A FSELKHDVREERLYKANAAL+VAFEALE MRE+APAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSFT+GGAHPLSLLDWSKFQPK RDGR + P
Sbjct: 679 VRKSSRMASFSELKHDVREERLYKANAALMVAFEALEAMREKAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSFTDGGAHPLSLLDWSKFQPKHRDGRRSHEP 806
BLAST of mRNA_M-pyrifera_M_contig6612.16052.1 vs. uniprot
Match: A0A6H5JMA5_9PHAE (UDENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA5_9PHAE) HSP 1 Score: 223 bits (569), Expect = 3.820e-64 Identity = 117/145 (80.69%), Postives = 130/145 (89.66%), Query Frame = 1
Query: 136 REGAAGDTGDGLSSSGNLRKASRLA-FSELKHDVREERLYKANAALVVAFEALEVMRERAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSFTEGGAHPLSLLDWSKFQPKQRDGRYAIAP 567
RE A+G G G+ +RK+SR+A FS+LKHDV+EERLYKANAAL+VAFEAL+ MRE+APAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSF++GGAHPLSLLDWSKFQPK RDGR + P
Sbjct: 1291 RETASGRIGGGVK----VRKSSRMASFSDLKHDVQEERLYKANAALMVAFEALDAMREKAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSFSDGGAHPLSLLDWSKFQPKHRDGRRSHEP 1431
BLAST of mRNA_M-pyrifera_M_contig6612.16052.1 vs. uniprot
Match: A0A835ZGT0_9STRA (UDENN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGT0_9STRA) HSP 1 Score: 122 bits (306), Expect = 8.330e-29 Identity = 68/118 (57.63%), Postives = 81/118 (68.64%), Query Frame = 1
Query: 202 RLAFSELKH-DVREERLYKANAALVVAFEALEVMRERAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSFTEGGAHPLSLLDWSKFQPKQRDGR 552
R+ FSE DV EERL A AAL VAFE +E+MR EE VYR LI AC RCG+SE+A+ VVEMMM+ GI PDA +S CL+DAF+MD + G +PL LLDWSK Q + DGR
Sbjct: 1185 RVPFSEQGEVDVAEERLAAAKAALGVAFEVVELMRRFRMEVEEGVYRGLIDACVRCGDSERAIQVVEMMMAAGIRPDAAISNCLIDAFSMDKTMAAG--NPLDLLDWSKLQSRGPDGR 1300
BLAST of mRNA_M-pyrifera_M_contig6612.16052.1 vs. uniprot
Match: A0A7S0C7X1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C7X1_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 5.610e-11 Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = 1
Query: 238 EERLYKANAALVVAFEALEVMRERAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSFTE-GGAHPLSLLDWS 522
EE A A LV+AF+ LE+MRER + Y+ LI ACGRCG++E+A ++ M GIV D +V CLV AF+ + ++ + G L +W+
Sbjct: 181 EEAKATAKAQLVLAFDILEMMRERILKADPEAYQCLIDACGRCGDTERATKLLSRMHEDGIVADGVVYACLVSAFSAESAWKKLMGKKEEDLPEWA 276
BLAST of mRNA_M-pyrifera_M_contig6612.16052.1 vs. uniprot
Match: A0A448ZR92_9STRA (UDENN domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZR92_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 1.120e-6 Identity = 31/78 (39.74%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 262 AALVVAFEALEVMRERAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSFTEGGA 495
A L +AF+ALE+M R + V++SL+ ACGRCGN+++A+A++E+M G+V D V + +FA + E A
Sbjct: 1000 AQLDLAFDALEMMETRGLNTDPDVFKSLMEACGRCGNTKRALALIEIMKRDGLVADNDVLIFFMASFAHCRPYEEASA 1077
BLAST of mRNA_M-pyrifera_M_contig6612.16052.1 vs. uniprot
Match: A0A7S1TYQ9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYQ9_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 2.090e-6 Identity = 33/97 (34.02%), Postives = 51/97 (52.58%), Query Frame = 1
Query: 229 DVREERLYKANAALVVAFEALEVMRERAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSFTEGGAH-PLSLLD 516
D EER K N L VAFE +E + + + + ++SLI ACGRCGN E+A+ V++ + I + L+ AF + G + PL ++D
Sbjct: 934 DAAEERQVKMNMMLEVAFEVIEAVLDLGASLDSHAFQSLIHACGRCGNVERAIKVLDFLEQANIQVTQTLRTALLIAFDRSGNAASGSGNLPLQIVD 1030
BLAST of mRNA_M-pyrifera_M_contig6612.16052.1 vs. uniprot
Match: A0A7S2Y8L2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y8L2_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 3.620e-6 Identity = 29/80 (36.25%), Postives = 47/80 (58.75%), Query Frame = 1
Query: 238 EERLYKANAALVVAFEALEVMRERAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDS 477
EE A A L +AFE L+ + R + Y+SL+ ACGRCG++++A ++++M G + D + C V AFA ++S
Sbjct: 577 EEAKEVATAQLDLAFEVLKTVSMRKLPADLDSYKSLMEACGRCGDTQRARILIDLMKKDGFILDGEILSCFVAAFAHEES 656
BLAST of mRNA_M-pyrifera_M_contig6612.16052.1 vs. uniprot
Match: B7FVV2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FVV2_PHATC) HSP 1 Score: 55.1 bits (131), Expect = 1.710e-5 Identity = 29/80 (36.25%), Postives = 47/80 (58.75%), Query Frame = 1
Query: 238 EERLYKANAALVVAFEALEVMRERAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDS 477
EE A+A L +AFEAL M R + Y+SL+ ACGRCG++E+A+ ++++M G D+ + + AFA + +
Sbjct: 904 EEAKEVASAQLDLAFEALTTMSLRGLKTDSDAYKSLMEACGRCGDTERALKLMQVMKVDGFFADSEILAWFIAAFAQESA 983
BLAST of mRNA_M-pyrifera_M_contig6612.16052.1 vs. uniprot
Match: A0A7S4AQ15_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AQ15_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 7.570e-5 Identity = 29/76 (38.16%), Postives = 46/76 (60.53%), Query Frame = 1
Query: 238 EERLYKANAALVVAFEALEVMRERAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFA 465
EE A A L +AF+ L++M R + V++SL+ ACGRCGN+++A+ ++E M G+V D V + +FA
Sbjct: 706 EEAREVAVAQLDLAFDGLQMMETRGLTTDPDVFKSLMEACGRCGNTKRALELIETMKRDGLVADNDVLVFFMASFA 781 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6612.16052.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig6612.16052.1 >prot_M-pyrifera_M_contig6612.16052.1 ID=prot_M-pyrifera_M_contig6612.16052.1|Name=mRNA_M-pyrifera_M_contig6612.16052.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=189bp PSVESASQSSLPAVVTMSTKGVVHGAGRPSGRDGDVGEQNADSEGREGAAback to top mRNA from alignment at M-pyrifera_M_contig6612:1871..4204+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig6612.16052.1 ID=mRNA_M-pyrifera_M_contig6612.16052.1|Name=mRNA_M-pyrifera_M_contig6612.16052.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2334bp|location=Sequence derived from alignment at M-pyrifera_M_contig6612:1871..4204+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig6612:1871..4204+ >mRNA_M-pyrifera_M_contig6612.16052.1 ID=mRNA_M-pyrifera_M_contig6612.16052.1|Name=mRNA_M-pyrifera_M_contig6612.16052.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1134bp|location=Sequence derived from alignment at M-pyrifera_M_contig6612:1871..4204+ (Macrocystis pyrifera P11B4 male)back to top |