prot_M-pyrifera_M_contig66097.16045.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig66097.16045.1
Unique Nameprot_M-pyrifera_M_contig66097.16045.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length189
Homology
BLAST of mRNA_M-pyrifera_M_contig66097.16045.1 vs. uniprot
Match: A0A0G4G4S0_VITBC (PCIF1_WW domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G4S0_VITBC)

HSP 1 Score: 142 bits (359), Expect = 4.520e-36
Identity = 78/188 (41.49%), Postives = 105/188 (55.85%), Query Frame = 0
Query:    6 LHFAKLCGLYAVHSRLCDPSFAHLPSALWCLLRRYTDVQG----GEGLSGAEAHAAVAEKGFVALSTLLGVEMEAFASPLNCFFSRFCSAQTDVDLPFGSLGSFYSFRPKKGSFQVNPPFTTTDFKKTAVHCISLLSRAQEEGKPLSFAICLPNWNDPIPYGIKLLLDSEFCTTKKESDAKEKRSAHV 189
            +H+ KL  LY++H+   DP     P  L+C+L+RY    G     E   G   HAA  E  F+ L   LGV ME FASPLNC+F RFCSA  D D  FGS+GS + F P+ GSF+V PP+T     + A H   LL RA+ E +P+SF + +P+W+ P P      ++SE C    + +   K S HV
Sbjct:  478 MHYQKLRRLYSIHNAQTDPRSDLFPRRLFCMLQRYITFIGVDPFSEHCQGGNMHAAAPESVFLFLHQRLGVRMEFFASPLNCYFRRFCSAFPDTDRFFGSMGSVFDFFPRAGSFEVGPPYTEEVMLECAKHLHKLLVRAESEDRPMSFVVFVPDWSSP-PADALAFMESEECAPFLKLNTVAKGSQHV 664          
BLAST of mRNA_M-pyrifera_M_contig66097.16045.1 vs. uniprot
Match: D2V319_NAEGR (Phosphorylated CTD interacting factor n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V319_NAEGR)

HSP 1 Score: 135 bits (341), Expect = 1.380e-33
Identity = 80/171 (46.78%), Postives = 97/171 (56.73%), Query Frame = 0
Query:    6 LHFAKLCGLYAVHSRLCDPSFAHLPSALWCLLRRYTDVQG-GEGLSGAEAHAAVAEKGFVALSTLLGVEMEAFASPLNCFFSRFCSAQTDVDLPFGSLGSFYSFRPKKGSFQVNPPFTTTDFKKTAVHCISLLSRAQEEGKPLSFAICLPNWNDPIPYGIKLLLDSE-FCT 174
            +HF KL  LY  H++  DP     P  L+ LLRRY    G  E   GA  HAA+ EKGF  L     V  E FASP+NC+FS FCSA  D D+ FGS GSF+ FRP +G F+  PP+T     KTA +C+ LL  + E   PLSFA+ +P W D   YG  L  DS   CT
Sbjct:  525 VHFNKLRLLYQKHNQEIDPDLKIFPYRLYALLRRYQTFFGDSESEEGANFHAALPEKGFEFLYKEFNVCHECFASPINCYFSSFCSAFPDTDVYFGSRGSFFEFRPTQGFFECGPPYTLEVMNKTAEYCLQLLKASDE---PLSFAVFVPEWTDT-EYGRMLHPDSTPLCT 691          
BLAST of mRNA_M-pyrifera_M_contig66097.16045.1 vs. uniprot
Match: A0A0G4F1F9_9ALVE (PCIF1_WW domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4F1F9_9ALVE)

HSP 1 Score: 129 bits (325), Expect = 2.320e-31
Identity = 70/158 (44.30%), Postives = 86/158 (54.43%), Query Frame = 0
Query:    6 LHFAKLCGLYAVHSRLCDPSFAHLPSALWCLLRRYTDVQGGE----GLSGAEAHAAVAEKGFVALSTLLGVEMEAFASPLNCFFSRFCSAQTDVDLPFGSLGSFYSFRPKKGSFQVNPPFTTTDFKKTAVHCISLLSRAQEEGKPLSFAICLPNWNDP 159
            LHF K+  LY  H+R  DP    L   L+ L+RRY    G +    G  G   HAA  E  F  L   + V  E FASPLNCFF RFCSA  D D  FGS GSF+ F PK G F+V PP+T    +  A H + LL  A++   PLSF   +P+W+ P
Sbjct: 1266 LHFTKMKALYERHNRESDPENEKLARRLYILVRRYVSFIGIDPRKPGNLGGNMHAAAPENVFKWLHANMAVSFEGFASPLNCFFPRFCSAFPDTDRWFGSQGSFFDFWPKSGHFEVGPPYTEEVMQAAAEHLLELLEAARDSSDPLSFTCFVPDWHSP 1423          
BLAST of mRNA_M-pyrifera_M_contig66097.16045.1 vs. uniprot
Match: A0A7S0SPV1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SPV1_9CHLO)

HSP 1 Score: 123 bits (309), Expect = 2.900e-30
Identity = 73/170 (42.94%), Postives = 92/170 (54.12%), Query Frame = 0
Query:    1 VRVRGLHFAKLCGLYAVHSRLC-------DPSFAHLPSALWCLLRRYTDVQGGEGLSGAEAHAAVAEKGFVALSTLLGVEMEAFASPLNCFFSRFCSAQTDVDLPFGSLGSFYSFRPKKGSFQVNPPFTTTDFKKTAVHCISLLSRAQEEGKPLSFAICLPNWNDPIPYG 163
            ++V   H  KL  LY  HS           P  A   +A++ +L RY      E L GA   AA+ E  F  L   LGV  EAFASPLNC + RFCSA  DVD PFGSLGSF+ F P++GSF++NPPF        A H   LL+ A+  G  LSFA+ +P W +   +G
Sbjct:   90 MQVSKQHMGKLRALYCRHSLGGAPLPPDGTPDHAAFAAAVFAVLARY------ESLGGAGYQAALGESAFDVLKRRLGVGCEAFASPLNCRYGRFCSAFPDVDRPFGSLGSFFDFAPERGSFEMNPPFVPEVLLAAAAHAEKLLAAAETAGDRLSFAVVVPAWREVPMWG 253          
BLAST of mRNA_M-pyrifera_M_contig66097.16045.1 vs. uniprot
Match: A0A061REH8_9CHLO (Phosphorylated CTD-interacting factor 1 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061REH8_9CHLO)

HSP 1 Score: 123 bits (308), Expect = 1.640e-29
Identity = 71/156 (45.51%), Postives = 90/156 (57.69%), Query Frame = 0
Query:    1 VRVRGLHFAKLCGLYAVHSRLCDPSFAHLPSALWCLLRRYTDVQGGEGLSGAEAHAAVAEKGFVALSTLLGVEMEAFASPLNCFFSRFCSAQTDVDLPFGSLGSFYSFRPKKGSFQVNPPFTTTDFKKTAVHCISLLSRAQEEGKPLSFAICLPNW 156
            +R+   H  KL  L+A H +   P    L + + CLL RY+ +QGG    G    AA+ E+ F  L   LG  +E FASPLNCF+ R CSA  D+D  FGSLGSF+SF PK+GSFQ NPPF     K+ A H   LL RA     P+SF + +P W
Sbjct:  278 LRINKEHLDKLRELHAAHGQPGAPEEEFL-AGVACLLLRYSALQGGS-CHGGGMQAALTEEAFGVLHERLGATVECFASPLNCFWRRHCSAFPDIDCAFGSLGSFFSFWPKEGSFQANPPFEAXVIKRMAEHIHELLERATG---PMSFCVFIPAW 428          
BLAST of mRNA_M-pyrifera_M_contig66097.16045.1 vs. uniprot
Match: A0A7S1X499_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X499_9CHLO)

HSP 1 Score: 119 bits (299), Expect = 6.660e-29
Identity = 66/141 (46.81%), Postives = 80/141 (56.74%), Query Frame = 0
Query:   33 LWCLLRRYTDVQGGEGLSGAEAHAAVAEKGFVALSTLLGVEMEAFASPLNCFFSRFCSAQTDVDLPFGSLGSFYSFRPKKGSFQVNPPFTTTDFKKTAVHCISLLSRAQEEGKPLSFAICLPNWNDPIPYGIKLLLDSEFC 173
            LWCLL RY      E LSG    AA+ E GF AL + + V+ E FASPLNC +   CSA  D D PFGSLGSF+ FRP  GSF+ NPPF          H  +LL+RA     PLSF + +P W + + +  K L  S FC
Sbjct:  210 LWCLLARY------EALSGHGYQAALCEAGFRALRSAMAVDFECFASPLNCHYGPHCSAFPDTDAPFGSLGSFFQFRPTSGSFEANPPFVPEVMSAMVGHMETLLARASG---PLSFTVIIPAWEEVLAW--KQLTGSNFC 339          
BLAST of mRNA_M-pyrifera_M_contig66097.16045.1 vs. uniprot
Match: C6LQA7_GIAIB (Phosphorylated CTD interacting factor PCIF1 n=3 Tax=Giardia intestinalis TaxID=5741 RepID=C6LQA7_GIAIB)

HSP 1 Score: 120 bits (300), Expect = 3.580e-28
Identity = 67/159 (42.14%), Postives = 89/159 (55.97%), Query Frame = 0
Query:    2 RVRGLHFAKLCGLYAVHS-RLCDPSFAHLPSALWCLLRRYTDVQGGEGLSGAEAHAAVAEKGFVALSTLLGVEMEAFASPLNCFFSRFCSAQTDVDLPFGSLGSFYSFRPKKGSFQVNPPFTTTDFKKTAVHCISLLSRAQEEGKPLSFAICLPNWNDP 159
            ++  +HF KL  LY   S +  DP        L+ LLRRY    G E   G   HAA  E  F  L + L V  E FASPLNCFFS+FCSA  ++D+ FGSLGSF+ +   +GSF+  PP+T     +TA H I  L ++ E+ +P+ F I +P W  P
Sbjct:  301 KLSSIHFYKLRELYKKTSGKRFDPELKMFNKLLFILLRRYHTFFGTERFEGTSFHAAAPENIFRRLKSFLDVSQECFASPLNCFFSQFCSAFPEIDVFFGSLGSFFDYDITEGSFECGPPYTLECMDRTARHIIRTLDKS-EDRRPIMFVIFVPEWRVP 458          
BLAST of mRNA_M-pyrifera_M_contig66097.16045.1 vs. uniprot
Match: C1E0K4_MICCC (PCIF1_WW domain-containing protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E0K4_MICCC)

HSP 1 Score: 113 bits (282), Expect = 5.560e-28
Identity = 63/128 (49.22%), Postives = 76/128 (59.38%), Query Frame = 0
Query:   31 SALWCLLRRYTDVQGGEGLSGAEAHAAVAEKGFVALSTLLGVEMEAFASPLNCFFSRFCSAQTDVDLPFGSLGSFYSFRPKKGSFQVNPPFTTTDFKKTAVHCISLLSRAQEEGKPLSFAICLPNWND 158
            +A + LL RY D  GG G       AA+ E  F  L   LGV  EAFASPLNC + RFCSA  DVD PFGSLGSF+ F P +GSF++NPPF        A    SLL+ A++ G  LSF + +P W D
Sbjct:    3 AATFSLLARY-DALGGAGYQ-----AALNETAFDVLKKRLGVGCEAFASPLNCRYGRFCSAFPDVDSPFGSLGSFFHFAPTRGSFEMNPPFVPEVLMAAAERAESLLAAAEDSGGRLSFVVVVPAWRD 124          
BLAST of mRNA_M-pyrifera_M_contig66097.16045.1 vs. uniprot
Match: A0A7S0ICW5_MICPS (Hypothetical protein (Fragment) n=3 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0ICW5_MICPS)

HSP 1 Score: 118 bits (296), Expect = 8.690e-28
Identity = 72/159 (45.28%), Postives = 85/159 (53.46%), Query Frame = 0
Query:    7 HFAKLCGLYAVHSR-------LCDPSFAHLPSALWCLLRRYTDVQGGEGLSGAEAHAAVAEKGFVALSTLLGVEMEAFASPLNCFFSRFCSAQTDVDLPFGSLGSFYSFRPKKGSFQVNPPFTTTDFKKTAVHCISLLSRAQEEGKPLSFAICLPNWND 158
            H  KL  LY  HS           P      +A++ LL RY D  GG G       AA+ E  F  L   LGV  EAFASPLNC + RFCSA  DVD PFGSLGSF+ F P +GSF++NPPF        A    SLL+ A+E G  LSF + +P W D
Sbjct:  245 HIGKLRALYCRHSLGGAPLPPEGTPEHGAFIAAIFSLLARY-DALGGAGYQ-----AALNETAFDVLKKRLGVGCEAFASPLNCRYGRFCSAFPDVDGPFGSLGSFFQFAPARGSFEMNPPFVPEVLTAAAERAESLLAAAEESGGRLSFVVVVPAWRD 397          
BLAST of mRNA_M-pyrifera_M_contig66097.16045.1 vs. uniprot
Match: A8BD86_GIAIC (Phosphorylated CTD interacting factor PCIF1 n=3 Tax=Giardia intestinalis TaxID=5741 RepID=A8BD86_GIAIC)

HSP 1 Score: 119 bits (297), Expect = 9.060e-28
Identity = 66/159 (41.51%), Postives = 88/159 (55.35%), Query Frame = 0
Query:    2 RVRGLHFAKLCGLYAVHS-RLCDPSFAHLPSALWCLLRRYTDVQGGEGLSGAEAHAAVAEKGFVALSTLLGVEMEAFASPLNCFFSRFCSAQTDVDLPFGSLGSFYSFRPKKGSFQVNPPFTTTDFKKTAVHCISLLSRAQEEGKPLSFAICLPNWNDP 159
            ++  +HF KL  LY   S +  DP        L+ LLRRY    G E   G   HAA  E  F  L + L V  E FASPLNCFFS+FCSA  ++D+ FGSLGSF+ +   +GSF+  PP+T     +TA H I  L ++ E  +P+ F + +P W  P
Sbjct:  301 KLSSIHFYKLRELYKRTSGKRFDPEMKMFSKLLFILLRRYHTFFGTERFEGTSFHAAAPENIFRRLKSFLEVSQECFASPLNCFFSQFCSAFPEIDVFFGSLGSFFDYDIAEGSFECGPPYTLECMDRTAKHIIRTLDKS-ENRRPIMFVVFVPEWRVP 458          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66097.16045.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0G4G4S0_VITBC4.520e-3641.49PCIF1_WW domain-containing protein n=2 Tax=Vitrell... [more]
D2V319_NAEGR1.380e-3346.78Phosphorylated CTD interacting factor n=1 Tax=Naeg... [more]
A0A0G4F1F9_9ALVE2.320e-3144.30PCIF1_WW domain-containing protein n=1 Tax=Chromer... [more]
A0A7S0SPV1_9CHLO2.900e-3042.94Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
A0A061REH8_9CHLO1.640e-2945.51Phosphorylated CTD-interacting factor 1 (Fragment)... [more]
A0A7S1X499_9CHLO6.660e-2946.81Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
C6LQA7_GIAIB3.580e-2842.14Phosphorylated CTD interacting factor PCIF1 n=3 Ta... [more]
C1E0K4_MICCC5.560e-2849.22PCIF1_WW domain-containing protein (Fragment) n=1 ... [more]
A0A7S0ICW5_MICPS8.690e-2845.28Hypothetical protein (Fragment) n=3 Tax=Micromonas... [more]
A8BD86_GIAIC9.060e-2841.51Phosphorylated CTD interacting factor PCIF1 n=3 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022035PCIF1, WW domainPFAMPF12237PCIF1_WWcoord: 10..183
e-value: 2.5E-47
score: 160.7
IPR039881mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase PCIF1-likePANTHERPTHR21727PHOSPHORYLATED CTD INTERACTING FACTOR 1coord: 1..178
NoneNo IPR availablePANTHERPTHR21727:SF0PHOSPHORYLATED CTD-INTERACTING FACTOR 1coord: 1..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66097contigM-pyrifera_M_contig66097:211..777 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66097.16045.1mRNA_M-pyrifera_M_contig66097.16045.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig66097 211..777 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig66097.16045.1 ID=prot_M-pyrifera_M_contig66097.16045.1|Name=mRNA_M-pyrifera_M_contig66097.16045.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=189bp
VRVRGLHFAKLCGLYAVHSRLCDPSFAHLPSALWCLLRRYTDVQGGEGLS
GAEAHAAVAEKGFVALSTLLGVEMEAFASPLNCFFSRFCSAQTDVDLPFG
SLGSFYSFRPKKGSFQVNPPFTTTDFKKTAVHCISLLSRAQEEGKPLSFA
ICLPNWNDPIPYGIKLLLDSEFCTTKKESDAKEKRSAHV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022035PCIF1_WW
IPR039881PCIF1-like