prot_M-pyrifera_M_contig66060.16041.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig66060.16041.1
Unique Nameprot_M-pyrifera_M_contig66060.16041.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length101
Homology
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BLAST of mRNA_M-pyrifera_M_contig66060.16041.1 vs. uniprot
Match: A0A2D5W5P8_9BACT (Flg_hook domain-containing protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W5P8_9BACT)

HSP 1 Score: 59.7 bits (143), Expect = 1.510e-8
Identity = 35/100 (35.00%), Postives = 52/100 (52.00%), Query Frame = 0 
Query:    1 RVTFAAEFAATGPVRVDLTMGAGGVTMRVLVTRHELVAPLQERAKKLQHVLADIVDVGVAAEFLPARVTVFPASAEDVDVSRRHLDIEFLRTRKVLDLRG 100
            R+T    F+  GPVR DL +  G +T+RV  +R   +  L ER ++L  VLA+          L   + + P + EDV + R  LD+  LR   +LD+RG
Sbjct:  138 RITVGVSFSRLGPVRADLLLVGGELTVRVAASRGATLRKLVERREELSAVLAN--------SGLAVHLAIVPGAEEDVSMDREVLDVSLLRDNHLLDVRG 229
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66060.16041.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2D5W5P8_9BACT1.510e-835.00Flg_hook domain-containing protein (Fragment) n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66060contigM-pyrifera_M_contig66060:71..373 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66060.16041.1mRNA_M-pyrifera_M_contig66060.16041.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig66060 71..373 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig66060.16041.1 ID=prot_M-pyrifera_M_contig66060.16041.1|Name=mRNA_M-pyrifera_M_contig66060.16041.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=101bp
RVTFAAEFAATGPVRVDLTMGAGGVTMRVLVTRHELVAPLQERAKKLQHV
LADIVDVGVAAEFLPARVTVFPASAEDVDVSRRHLDIEFLRTRKVLDLRG
*
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