prot_M-pyrifera_M_contig66033.16033.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig66033.16033.1
Unique Nameprot_M-pyrifera_M_contig66033.16033.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length62
Homology
BLAST of mRNA_M-pyrifera_M_contig66033.16033.1 vs. uniprot
Match: D7FTN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN6_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 1.340e-24
Identity = 45/56 (80.36%), Postives = 49/56 (87.50%), Query Frame = 0
Query:    1 VTFYGPRSEYVASGSDCGHIFLWDKETTKLEMLLSGDNVGAVNCLEPHPFLPVLAT 56
            VTFYGPRSE+V SGSDCGHIF W+K + KLEMLL GD VGAVNCLEPHP+LP LAT
Sbjct:  510 VTFYGPRSEFVVSGSDCGHIFFWNKSSAKLEMLLFGDKVGAVNCLEPHPYLPALAT 565          
BLAST of mRNA_M-pyrifera_M_contig66033.16033.1 vs. uniprot
Match: A0A6H5KJD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJD8_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 1.340e-24
Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 0
Query:    1 VTFYGPRSEYVASGSDCGHIFLWDKETTKLEMLLSGDNVGAVNCLEPHPFLPVLATRCVHR 61
            VTFYGPRSE+V SGSDCGHIF W+K + KLEMLL GD VGAVNCLEPHP+LP LAT  + R
Sbjct:  555 VTFYGPRSEFVVSGSDCGHIFFWNKASAKLEMLLFGDKVGAVNCLEPHPYLPALATSGLSR 615          
BLAST of mRNA_M-pyrifera_M_contig66033.16033.1 vs. uniprot
Match: A0A6S7JB47_PARCT (DDB1- and CUL4-associated factor 8 n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JB47_PARCT)

HSP 1 Score: 94.7 bits (234), Expect = 2.500e-23
Identity = 40/56 (71.43%), Postives = 44/56 (78.57%), Query Frame = 0
Query:    1 VTFYGPRSEYVASGSDCGHIFLWDKETTKLEMLLSGDNVGAVNCLEPHPFLPVLAT 56
            V FYGPRSE+V SGSDCGH+FLWDKET  +  LL GD  G VNCLEPHP+ P LAT
Sbjct:    6 VNFYGPRSEFVVSGSDCGHVFLWDKETESIVQLLEGDVTGVVNCLEPHPYHPFLAT 61          
BLAST of mRNA_M-pyrifera_M_contig66033.16033.1 vs. uniprot
Match: UPI000F55208E (DDB1- and CUL4-associated factor 8-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F55208E)

HSP 1 Score: 100 bits (248), Expect = 2.530e-23
Identity = 41/56 (73.21%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    1 VTFYGPRSEYVASGSDCGHIFLWDKETTKLEMLLSGDNVGAVNCLEPHPFLPVLAT 56
            V FYGP+SEY+ SGSDCGHIFLWDKET ++   L GDN G VNCLEPHPF P+LAT
Sbjct:  301 VNFYGPQSEYIVSGSDCGHIFLWDKETEEVVQFLEGDNTGVVNCLEPHPFAPILAT 356          
BLAST of mRNA_M-pyrifera_M_contig66033.16033.1 vs. uniprot
Match: UPI00106BD386 (DDB1- and CUL4-associated factor 8-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106BD386)

HSP 1 Score: 95.5 bits (236), Expect = 1.680e-21
Identity = 39/56 (69.64%), Postives = 45/56 (80.36%), Query Frame = 0
Query:    1 VTFYGPRSEYVASGSDCGHIFLWDKETTKLEMLLSGDNVGAVNCLEPHPFLPVLAT 56
            V FYGPRSE+V SGSDCGH+F+WDKET  +  LL GD  G VNCLEPHP+ P+LAT
Sbjct:  457 VNFYGPRSEFVVSGSDCGHVFIWDKETESIVQLLEGDVAGVVNCLEPHPYYPLLAT 512          
BLAST of mRNA_M-pyrifera_M_contig66033.16033.1 vs. uniprot
Match: A0A2K6EKW7_PROCO (DDB1- and CUL4-associated factor 8-like protein 2 n=4 Tax=Propithecus coquereli TaxID=379532 RepID=A0A2K6EKW7_PROCO)

HSP 1 Score: 95.1 bits (235), Expect = 2.310e-21
Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    1 VTFYGPRSEYVASGSDCGHIFLWDKETTKLEMLLSGDNVGAVNCLEPHPFLPVLAT 56
            V FYGP+SE+V SGSDCGHIFLW+K + ++  L+ GDN GAVNCLEPHP LPVLAT
Sbjct:  473 VNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQLMEGDNEGAVNCLEPHPCLPVLAT 528          
BLAST of mRNA_M-pyrifera_M_contig66033.16033.1 vs. uniprot
Match: A0A0A6YWY2_MOUSE (DDB1- and CUL4-associated factor 8 (Fragment) n=2 Tax=Boreoeutheria TaxID=1437010 RepID=A0A0A6YWY2_MOUSE)

HSP 1 Score: 89.7 bits (221), Expect = 2.310e-21
Identity = 37/56 (66.07%), Postives = 44/56 (78.57%), Query Frame = 0
Query:    1 VTFYGPRSEYVASGSDCGHIFLWDKETTKLEMLLSGDNVGAVNCLEPHPFLPVLAT 56
            V FYGP+SE+V SGSDCGHIFLW+K + ++   + GD  G VNCLEPHP LPVLAT
Sbjct:   31 VNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLAT 86          
BLAST of mRNA_M-pyrifera_M_contig66033.16033.1 vs. uniprot
Match: UPI001CF20684 (DDB1- and CUL4-associated factor 8-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF20684)

HSP 1 Score: 94.4 bits (233), Expect = 3.180e-21
Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 0
Query:    1 VTFYGPRSEYVASGSDCGHIFLWDKETTKLEMLLSGDNVGAVNCLEPHPFLPVLAT 56
            V FYGP+SEY+ SGSDC HIFLWDK+T ++   L GDN G VNCLEPHP  PVLAT
Sbjct:  299 VNFYGPQSEYIVSGSDCSHIFLWDKQTEEVVQFLQGDNTGVVNCLEPHPHAPVLAT 354          
BLAST of mRNA_M-pyrifera_M_contig66033.16033.1 vs. uniprot
Match: A0A8B8D975_CRAVI (LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 8-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8D975_CRAVI)

HSP 1 Score: 93.6 bits (231), Expect = 8.150e-21
Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 0
Query:    1 VTFYGPRSEYVASGSDCGHIFLWDKETTKLEMLLSGDNVGAVNCLEPHPFLPVLAT 56
            V FYGPRSE+V SGSDCGHIFLWDKET  +   L GD+ G +N LEPHPF P+LAT
Sbjct:  597 VNFYGPRSEFVVSGSDCGHIFLWDKETESVVQFLEGDDCGVINVLEPHPFAPILAT 652          
BLAST of mRNA_M-pyrifera_M_contig66033.16033.1 vs. uniprot
Match: A0A6P4K4F4_DROBP (DDB1- and CUL4-associated factor 8 n=1 Tax=Drosophila bipectinata TaxID=42026 RepID=A0A6P4K4F4_DROBP)

HSP 1 Score: 93.6 bits (231), Expect = 8.160e-21
Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = 0
Query:    1 VTFYGPRSEYVASGSDCGHIFLWDKETTKLEMLLSGDNVGAVNCLEPHPFLPVLAT 56
            V F+GPRSEY+ SGSDCGHIFLWDK T  +   + GD+ G VNCLEPHP++PVLAT
Sbjct:  588 VNFFGPRSEYIVSGSDCGHIFLWDKNTEAIINFMKGDHAGVVNCLEPHPWMPVLAT 643          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66033.16033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTN6_ECTSI1.340e-2480.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJD8_9PHAE1.340e-2475.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6S7JB47_PARCT2.500e-2371.43DDB1- and CUL4-associated factor 8 n=3 Tax=Paramur... [more]
UPI000F55208E2.530e-2373.21DDB1- and CUL4-associated factor 8-like n=1 Tax=Po... [more]
UPI00106BD3861.680e-2169.64DDB1- and CUL4-associated factor 8-like n=1 Tax=De... [more]
A0A2K6EKW7_PROCO2.310e-2171.43DDB1- and CUL4-associated factor 8-like protein 2 ... [more]
A0A0A6YWY2_MOUSE2.310e-2166.07DDB1- and CUL4-associated factor 8 (Fragment) n=2 ... [more]
UPI001CF206843.180e-2169.64DDB1- and CUL4-associated factor 8-like n=1 Tax=Ac... [more]
A0A8B8D975_CRAVI8.150e-2169.64LOW QUALITY PROTEIN: DDB1- and CUL4-associated fac... [more]
A0A6P4K4F4_DROBP8.160e-2167.86DDB1- and CUL4-associated factor 8 n=1 Tax=Drosoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..61
e-value: 3.9E-6
score: 27.9
NoneNo IPR availablePANTHERPTHR15574WD REPEAT DOMAIN-CONTAINING FAMILYcoord: 1..58
NoneNo IPR availablePANTHERPTHR15574:SF42PET2 PROTEINcoord: 1..58
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 4..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66033contigM-pyrifera_M_contig66033:109..1182 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66033.16033.1mRNA_M-pyrifera_M_contig66033.16033.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig66033 109..1182 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig66033.16033.1 ID=prot_M-pyrifera_M_contig66033.16033.1|Name=mRNA_M-pyrifera_M_contig66033.16033.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=62bp
VTFYGPRSEYVASGSDCGHIFLWDKETTKLEMLLSGDNVGAVNCLEPHPF
LPVLATRCVHRH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf