prot_M-pyrifera_M_contig6594.16011.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6594.16011.1
Unique Nameprot_M-pyrifera_M_contig6594.16011.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length926
Homology
BLAST of mRNA_M-pyrifera_M_contig6594.16011.1 vs. uniprot
Match: D7G7E5_ECTSI (VHL domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E5_ECTSI)

HSP 1 Score: 573 bits (1478), Expect = 1.070e-187
Identity = 414/958 (43.22%), Postives = 519/958 (54.18%), Query Frame = 0
Query:    1 ERTHVAPGTPLEVRHLLPPIGSRKTRRGLSEPS--PIAPHAEPSFPRPAPVDRNLSDLYDPALDPSPIGMEDRGIVQQIRSTRIVARREPSGAEFSRGGSVARQAGSSDCGSNATVVTVLNGYSYEAATKLSPTFGSGLGXXXXXXXXXXDADCDEPCCVDVFVQGFSTGGIKHATLAPSAVFRRALHRRSMSLAAPEISSNLPEEAREVIEAREGYLGLTVFLARADDWSD----------YENAHDYSNGDGTHRRSSKPMQQSESITRIIFERENGTPGPSQNAFRVQFEPGPLGMELEEDPDQRGVVRIRRLLQAGQAEHDGRFSVGCLIVAVGDWAGHDDSISDHIVLGEPSGPRGGRRGRSGQN-----------ERSTSAPLGIKRPTTATRTCPVIIRSLRQLEEAVSNRKDGHLFVVWALDRLAPEAIAALGIPRPS-TCARKLFHRWPSNLLHSRHKEFYRTEAAEFESGGRGAHGHDHSPTVVANSRGTPYSARTRFSCSSGDGTQEQGGGAPRWWQSNRAFGGKDRSEFLTSSDKGRVPPH-----DHTSGGNGXXXXXXXXXDQQEGAESKDDMVAVEDGYPPDSALGAPPLSASRKKYIPRSWTGGSNDDDDENTGESLAGDEVCGRGGGGGXXXXXXXWEFETGGGIFDEDDQGLASRKQPRRNDHV----PESTDEPDEEKTMLPLGLQASIVDDVAVCLWFCNNHESATMKVSWIDYGGKRVLRRSLEPGAFYFERSFATHPWVVANDNNNNTGESNLETNELTEEGEPQKEXXXXXXXXXXXXXXXXXCVQREDGGDCCVVRLGNAMAAAQFSGSLIWNPARKTLSVTKQARIGVSGMASSAVAAVGVAAGGGAGLDPGKKRLCMAGAARESDVVRAVAERASVRAEKARILEEMRTWRTQPPSRSG---AAGDRSGVGG-LGQGTPNLRIVMMGSSACS 921
            +RTH  P TP EV HLLPPIG RK RR  S  S  PI+P+ EPS P PAPVDRN S LYDPALDPSPIG E+RG VQ +R +RIV R++         G+    A S++     T VTVLNG+  +    +     +  G          +   DE  C+DVFV+GFS G I H TL PS +F RAL   S     P+ SS +PE++R  ++ REGYLGLTVFLAR  +WS            +   +   GD + R   K   ++E IT +IF+RE+GTP PS+NAFRVQFEPGPLG+ELEE P +RG+VR+RR+LQAGQAE DGR S GCLIVAVG W   + S +  +     SG   G     G +             +     G K   +A      IIRSL   EEAVS R+   LFV+WALDR APEA+AALG P+ +  C   +   W    L+SR +          E GGR A G         + R  P+ A T       + T   G  AP W  +     G+D   +  SSD+ ++         H +GG             Q     ++  +A      P    G+  L+A   +     W           + ES  G    G GG          WEFETGGGIFD+ DQGLA+RK P R+           DE +++    PLGL++S VDD+AV +WFCNNHESA MKVSWI+Y G+RV RRSL PGA YFERSFATHPWV+ + ++N+ G  +L      EE    K                      +D  + CVVRLG+AMA AQF+GSLIWNP  +TLS+TKQAR+GV GM+++A AAVG     G GLDPG KR CMAG  RE++  RA A RA VR EKAR+LEEM+ WRT P    G     G   G+GG LGQG PNLR+VMMG S  S
Sbjct:   31 KRTHHTPTTPSEVGHLLPPIGGRKPRRDESGSSLPPISPYVEPSLPCPAPVDRNRSGLYDPALDPSPIGKEERGKVQPVRISRIVPRQDSGLGALELQGA----ARSAEGPHIPTAVTVLNGHRTQ---HMRDRTSAPAGDCASAADVLSE---DEERCIDVFVEGFSRG-IDHETLLPSEMFCRALQHGSQG--PPKPSSLIPEDSRHYLDVREGYLGLTVFLARTSEWSGTIDGGVQGEKQDEPIEPGIGDESDRDDRKLATETE-ITHMIFQREDGTPAPSRNAFRVQFEPGPLGVELEEYPGERGIVRVRRVLQAGQAELDGRLSAGCLIVAVGGW--DEASANGALRPNTASGAGAGHVALDGVDIYGNLDVPALRSSAMDGGSGAKSHESA------IIRSLADFEEAVSCREPDRLFVLWALDRHAPEAVAALGPPQANGVCT--VPRGWSPASLYSRRRN---------EGGGR-ARG----AFPPGSERQRPFEASTSPKWQGYEETVPAG--APGWETATSLARGRDSLGYSLSSDRPKLASSPRNQASHAAGGG----------QLQAXXXXREADLATSAFGSPKEVTGSERLAAGIDRL---GWP----------SRESEGGAPRFGEGG----ARSAQGWEFETGGGIFDDSDQGLAARKHPGRSQATLAPAAAPADETEKKLPTFPLGLESSAVDDLAVFIWFCNNHESAVMKVSWINYDGRRVPRRSLAPGACYFERSFATHPWVIEHSDSNHYGNRSLHAGGQQEE----KRESTGSGAPAPLQPSPPREAGDDDDAELCVVRLGDAMALAQFTGSLIWNPTGRTLSITKQARVGVPGMSAAARAAVGAGVEDGGGLDPGMKRQCMAGQRREAEEARARAARAVVREEKARVLEEMKAWRTHPLGGGGLGAGGGVAEGLGGKLGQGVPNLRVVMMGLSGWS 917          
BLAST of mRNA_M-pyrifera_M_contig6594.16011.1 vs. uniprot
Match: A0A6H5JVY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVY5_9PHAE)

HSP 1 Score: 544 bits (1401), Expect = 7.500e-176
Identity = 412/999 (41.24%), Postives = 523/999 (52.35%), Query Frame = 0
Query:    1 ERTHVAPGTPLEVRHLLPPIGSRKTRRGLSEPS--PIAPHAEPSFPRPAPVDRNLSDLYDPALDPSPIGMEDRGIVQQIRSTRIVARREPS-GAEFSRGGSVARQAGSSDCGSNATVVTVLNGYSYE-AATKLSPTFGSGLGXXXXXXXXXXDADCDEPCCVDVFVQGFSTGGIKHATLAPSAVFRRALHRRSMSLAAPEISSNLPEEAREVIEAREGYLGLTVFLARADDWSD----------YENAHDYSNGDGTHRRSSKPMQQSESITRIIFERENGTPGPSQNAFRVQFEPGPLGMELEEDPDQRGVVRIRRLLQAGQAEHDGRFSVGCLIVAVGDWAGHDDSISDHIVLGEPSGPRGGRRGRS--------GQNERSTSAPLGIKRPTTATRTCPVIIRSLRQLEEAVSNRKDGHLFVVWALDRLAPEAIAALGIPRPSTCARKLFHRWPSNLLHSRHKEFYRTEAAEFESGGRGAHGHDHSPTVVANSRGTPYSARTRFSCSSGDGTQEQGGGAPRWWQSNRAFGGKDRSEFLTSSDKGRVPPH-----DHTSGGNGXXXXXXXXXDQQEGAESKDDMVAVEDGYPPDSALGAPPLSA--SRKKYIPRSWTGGSNDDDDENTGESLAGDEVCGRGGGGGXXXXXXXWEFETGGGIFDEDDQGLASRKQPRRNDHV--PEST--DEPDEEKTMLPLGLQASIVDDVAVCLWFCNNHESATMKV------------------------------------------SWIDYGGKRVLRRSLEPGAFYFERSFATHPWVVANDNNNNTGESNLETN---ELTEEGEPQKEXXXXXXXXXXXXXXXXXCVQREDGGDCCVVRLGNAMAAAQFSGSLIWNPARKTLSVTKQARIGVSGMASSAVAAVGVAAGGGAGLDPGKKRLCMAGAARESDVVRAVAERASVRAEKARILEEMRTWRTQPPSRSG---AAGDRSGVGG-LGQGTPNLRIVMMGS 917
            +RTH  P TP +V HLLPPIG RK RR  S  S  PI P  EPS P PAPVDRN S LYDPALDPSPIG E+RG VQ +R +R+V R++   GA+  +G     +A S++     TVVTVLNGY+ +    + S   G                  DE  C+DVFV+GFS G + H TL PS +F RAL   S     P+ SS + E++R  ++ REGYLGLTVFLAR  +WS            +   +   GDG        +    +ITR+IF+RE+GTP PS+NAFRVQFEPGPLG+ELEE P  RG+VR+RR+LQAGQAE DGR S GCLIVAVG W   D+S ++  +   PS   G   G          G  +        +   + A      IIRSL   EEAVS R+   LFV+WALDR APEA+AALG P+ +          P+++   R  E        F SG                 R  P+ A ++   S G    E  G   R   +  A   +D   +  SSD+ ++         H +GG            Q  G + + D+     G P +   G+  L+A  +R  +  R   GG+        GE  A + +               WEFETGGGIFD+DDQGLA+RK P R      P +T  DE +E+    PLGL++S VDD+AV +WFCNNHESA MKV                                          SWIDY G+RV RRSL PGA YFERSFATHPWV+ + ++N  G ++   +   +  E+ EP                        +D  + CVVRLG+ MA AQF+GSLIWNP  +TLS+TKQAR+GV GM+++A AAVG     G GLDPG KRLCMAG  RE++  RA A RA VR EKAR+LEE++ WRT P    G     G   G+GG LGQG PNLR+VMMGS
Sbjct:   25 KRTHHTPTTPSDVGHLLPPIGGRKPRRDGSGSSLPPIPPCVEPSLPCPAPVDRNRSGLYDPALDPSPIGKEERGKVQPVRISRVVPRQDSGLGAQELQG-----EARSAEGLPIPTVVTVLNGYNTQHRRDRTSAPAGDYASATHVLSE-------DEESCIDVFVEGFSRG-VDHETLLPSEMFCRALQHGSQG--PPKPSSLISEDSRHYLDVREGYLGLTVFLARTSEWSGTIDGGVQGEKQDECIEPGIGDGK-------LAAEMAITRMIFQREDGTPAPSRNAFRVQFEPGPLGVELEEYPGDRGIVRVRRVLQAGQAELDGRLSAGCLIVAVGGW---DESSANGTL--RPSTASGAGTGHVVLDGVDIYGNLDVPALRSSAMDGGSGAEAHKSAIIRSLADFEEAVSCREPDRLFVLWALDRHAPEAVAALGPPQANGVCTVPRGWSPASVYSRRRNEGRGRVRGTFPSGSE---------------RQRPFEA-SKSPKSQGYEESEPEGALGRETTTILARS-RDSLRYSLSSDRPKLASFARNQASHAAGGGQL---------QTGGGQPEADLAMSAFGSPKE-VTGSERLAAGINRLGWPSREGKGGA-----PRFGEGGARNAI--------------GWEFETGGGIFDDDDQGLAARKHPARRQATLAPAATPADEAEEKPPTFPLGLESSAVDDLAVFIWFCNNHESAVMKVEQPHEGVGNPVRGFGFCWEKEHFVLTPRDTHGVPLIQRWHVVSWIDYDGRRVPRRSLAPGACYFERSFATHPWVIQHSDSNQAGSNDRSLHAGGQQEEKCEPTGSGAPVPLKPSPPREAGD-----DDDAELCVVRLGDTMAVAQFTGSLIWNPTGRTLSITKQARVGVPGMSAAARAAVGAGVEEGGGLDPGMKRLCMAGQRREAEEARARAARAVVREEKARVLEEIKAWRTHPLGGGGLGAGGGVAEGLGGKLGQGVPNLRVVMMGS 945          
BLAST of mRNA_M-pyrifera_M_contig6594.16011.1 vs. uniprot
Match: A0A835ZGW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGW3_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.880e-12
Identity = 67/217 (30.88%), Postives = 90/217 (41.47%), Query Frame = 0
Query:  625 WEFETGGGIF-------------------DEDDQGLASRKQPRRNDHVPESTDEPDEEKTM---LPLGLQASIVDDVAVCLWFCNNHESATMKVSWIDYGGKRVLRRSLEPGAFYFERSFATHPWVVANDNNNNTGESNLETNELTEEGEPQKEXXXXXXXXXXXXXXXXXCVQREDGGDCCVVRLG-NAMAA-AQFSGSLIWNPARKTLSVTKQAR 817
            W F TGGGI                    D DD G  + +  R    VP S+  P         LPL + AS  D   V L F N H +  ++V W+DYGG+ V RR L PG  YFERSFA+HPW++     + TG                                         G +C  VR G +A+AA A  +   +W+P R+++SV  QA+
Sbjct:  467 WGFATGGGILESHDAVLSPPPRDAPAGDIDSDDDGQVAARVRRSEGAVPASSQSPXXXXXXXLSLPLSMGASKADVAPVFLCFSNAHATMKLRVGWLDYGGQNVPRRVLLPGQTYFERSFASHPWLLQAMGPSGTG----------------------------------------SGSECVAVRCGADAVAAGAGLAFCAMWDPLRRSVSVMPQAK 643          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6594.16011.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G7E5_ECTSI1.070e-18743.22VHL domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JVY5_9PHAE7.500e-17641.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZGW3_9STRA1.880e-1230.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024053von Hippel-Lindau disease tumour suppressor, beta domainPFAMPF01847VHLcoord: 679..732
e-value: 2.5E-4
score: 20.9
IPR037140von Hippel-Lindau disease tumour suppressor, beta domain superfamilyGENE3D2.60.40.780coord: 662..756
e-value: 8.7E-9
score: 37.4
IPR036208VHL superfamilySUPERFAMILY49468VHLcoord: 673..735

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6594contigM-pyrifera_M_contig6594:2275..6923 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6594.16011.1mRNA_M-pyrifera_M_contig6594.16011.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6594 2275..6923 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6594.16011.1 ID=prot_M-pyrifera_M_contig6594.16011.1|Name=mRNA_M-pyrifera_M_contig6594.16011.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=926bp
ERTHVAPGTPLEVRHLLPPIGSRKTRRGLSEPSPIAPHAEPSFPRPAPVD
RNLSDLYDPALDPSPIGMEDRGIVQQIRSTRIVARREPSGAEFSRGGSVA
RQAGSSDCGSNATVVTVLNGYSYEAATKLSPTFGSGLGGGGGGGGGGRDA
DCDEPCCVDVFVQGFSTGGIKHATLAPSAVFRRALHRRSMSLAAPEISSN
LPEEAREVIEAREGYLGLTVFLARADDWSDYENAHDYSNGDGTHRRSSKP
MQQSESITRIIFERENGTPGPSQNAFRVQFEPGPLGMELEEDPDQRGVVR
IRRLLQAGQAEHDGRFSVGCLIVAVGDWAGHDDSISDHIVLGEPSGPRGG
RRGRSGQNERSTSAPLGIKRPTTATRTCPVIIRSLRQLEEAVSNRKDGHL
FVVWALDRLAPEAIAALGIPRPSTCARKLFHRWPSNLLHSRHKEFYRTEA
AEFESGGRGAHGHDHSPTVVANSRGTPYSARTRFSCSSGDGTQEQGGGAP
RWWQSNRAFGGKDRSEFLTSSDKGRVPPHDHTSGGNGATGATGASQDQQE
GAESKDDMVAVEDGYPPDSALGAPPLSASRKKYIPRSWTGGSNDDDDENT
GESLAGDEVCGRGGGGGGRGEGGGWEFETGGGIFDEDDQGLASRKQPRRN
DHVPESTDEPDEEKTMLPLGLQASIVDDVAVCLWFCNNHESATMKVSWID
YGGKRVLRRSLEPGAFYFERSFATHPWVVANDNNNNTGESNLETNELTEE
GEPQKETTTTTTTTAAKATAPSSCVQREDGGDCCVVRLGNAMAAAQFSGS
LIWNPARKTLSVTKQARIGVSGMASSAVAAVGVAAGGGAGLDPGKKRLCM
AGAARESDVVRAVAERASVRAEKARILEEMRTWRTQPPSRSGAAGDRSGV
GGLGQGTPNLRIVMMGSSACSSDAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024053VHL_beta_dom
IPR037140VHL_beta_dom_sf
IPR036208VHL_sf