prot_M-pyrifera_M_contig65760.15973.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig65760.15973.1
Unique Name	prot_M-pyrifera_M_contig65760.15973.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	139

Homology

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BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Match: A0A836BMG7_9CHLO (RRM domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BMG7_9CHLO)

HSP 1 Score: 146 bits (368), Expect = 6.950e-42
Identity = 77/131 (58.78%), Postives = 94/131 (71.76%), Query Frame = 0

Query:    9 AAREALSKFSGPSGIVLGGPTKESAGVLYVGHIPHGFYEDQMLGFFSQFGTVNRVRVSRSPKTARSRGYGFVEFEDREVARIVAETMHGYFLEKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSVARRR 139
            A R+  S+ +GPSG    G  +  A VLY+GH+PHGFYE +MLG+FSQFG V RVR+SRS +T ++RGY FVEF   EVA + AE M GYFL K+ L VKLL PA+VHP +F GA+RKFK IPW  V R R
Sbjct:    6 AKRKEESEDAGPSGREQDGNAQ--ARVLYLGHLPHGFYEKEMLGYFSQFGKVTRVRLSRSKRTGKARGYAFVEFMHPEVASVAAEAMDGYFLFKQRLSVKLLPPAKVHPLLFNGANRKFKVIPWRKVERGR 134

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BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Match: A0A5A8DFN2_CAFRO (RRM domain-containing protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8DFN2_CAFRO)

HSP 1 Score: 146 bits (368), Expect = 6.650e-40
Identity = 68/113 (60.18%), Postives = 85/113 (75.22%), Query Frame = 0

Query:   27 GPTKESAGVLYVGHIPHGFYEDQMLGFFSQFGTVNRVRVSRSPKTARSRGYGFVEFEDREVARIVAETMHGYFLEKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSVARRR 139
            GPT  +AGV+YVGH+PHGFYE+ + GFF+QFG V RVRV+RS KTAR++GY FVEF + EVARIVAETM+ Y+L  K L  K +  A  HP +F GAHR+FK + W   AR+R
Sbjct:   52 GPTPTTAGVVYVGHLPHGFYEEAIRGFFAQFGRVTRVRVARSKKTARAKGYAFVEFSNSEVARIVAETMNRYYLGGKYLVAKFIAGADAHPLLFVGAHRRFKAVDWRQAARKR 164

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BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Match: D8TQJ3_VOLCA (RRM domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TQJ3_VOLCA)

HSP 1 Score: 140 bits (353), Expect = 1.220e-39
Identity = 64/107 (59.81%), Postives = 85/107 (79.44%), Query Frame = 0

Query:   33 AGVLYVGHIPHGFYEDQMLGFFSQFGTVNRVRVSRSPKTARSRGYGFVEFEDREVARIVAETMHGYFLEKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSVARRR 139
            A V+YVGH+PHGF+E QMLG+FSQFG V R+R+SRS KT  ++GY F+EF+  EVAR+ AE M GYFL K+ L+ KL+ P++VHP++F GA+R+FK IPW  V R+R
Sbjct:   27 ARVVYVGHVPHGFFEKQMLGYFSQFGKVTRLRLSRSKKTGNAKGYAFLEFQYPEVARVAAEAMDGYFLFKQRLKCKLIPPSRVHPQLFQGANRRFKVIPWRRVERQR 133

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BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Match: A8J450_CHLRE (Predicted protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A8J450_CHLRE)

HSP 1 Score: 139 bits (351), Expect = 2.190e-39
Identity = 66/107 (61.68%), Postives = 83/107 (77.57%), Query Frame = 0

Query:   33 AGVLYVGHIPHGFYEDQMLGFFSQFGTVNRVRVSRSPKTARSRGYGFVEFEDREVARIVAETMHGYFLEKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSVARRR 139
            A V+YVGHIPHGF+E QMLG+FSQFG V RVR+SRS +T  S+GY F+EF+  EVAR+ AE M GYF+ K+ L  KL+ PA+VHP +F GA+RKFK IP  +V R+R
Sbjct:   23 ARVIYVGHIPHGFFEKQMLGYFSQFGKVTRVRLSRSKRTGNSKGYAFIEFQHPEVARVAAEAMDGYFIFKQRLSCKLMPPARVHPMLFNGANRKFKVIPRRTVERKR 129

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BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Match: A0A7S1CLL1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CLL1_9STRA)

HSP 1 Score: 140 bits (352), Expect = 6.320e-39
Identity = 64/116 (55.17%), Postives = 89/116 (76.72%), Query Frame = 0

Query:   26 GGPTKESAGVLYVGHIPHGFYEDQMLGFFSQFGTVNRVRVSRSPKTARSRGYGFVEF--EDREVARIVAETMHGYFLEKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSVARRR 139
            GG  ++  GV+Y+GHIPHGFYEDQM GFFSQFG V+R+R+SRS +T RSR Y F++F  E+ + A++VA+TMHGY L    L  +++ P ++HPR F GA+RKF+ +PW S+AR+R
Sbjct:   59 GGSDQDDGGVVYLGHIPHGFYEDQMRGFFSQFGRVSRLRLSRSKRTGRSRHYAFLQFGKEEGDCAQVVAQTMHGYILMGHSLVCRVVPPERLHPRTFRGANRKFRAVPWRSIARQR 174

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BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Match: A0A6I9S6U9_ELAGV (MKI67 FHA domain-interacting nucleolar phosphoprotein n=4 Tax=Arecaceae TaxID=4710 RepID=A0A6I9S6U9_ELAGV)

HSP 1 Score: 139 bits (349), Expect = 1.250e-38
Identity = 59/111 (53.15%), Postives = 87/111 (78.38%), Query Frame = 0

Query:   28 PTKESAGVLYVGHIPHGFYEDQMLGFFSQFGTVNRVRVSRSPKTARSRGYGFVEFEDREVARIVAETMHGYFLEKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSVARR 138
            P KE+A VLY+GHIPHGFYE+QM GFF QFG + R+R+SR+ KT +S+ YGF+EFE+ EVA++VA+ M+ Y L +  LQ+ L+ P +VHP+++ G +R+FK + W ++AR+
Sbjct:   49 PVKETATVLYIGHIPHGFYEEQMQGFFQQFGKIKRLRISRNRKTGKSKHYGFLEFENPEVAKVVADEMNNYLLFEHNLQLSLIPPERVHPKLWKGVNRRFKPVDWKAIARK 159

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BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Match: Q8SAB6_ELAOL (RNA binding protein n=2 Tax=Arecaceae TaxID=4710 RepID=Q8SAB6_ELAOL)

HSP 1 Score: 138 bits (347), Expect = 2.510e-38
Identity = 59/111 (53.15%), Postives = 86/111 (77.48%), Query Frame = 0

Query:   28 PTKESAGVLYVGHIPHGFYEDQMLGFFSQFGTVNRVRVSRSPKTARSRGYGFVEFEDREVARIVAETMHGYFLEKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSVARR 138
            P KE+A VLY+GHIPHGFYE+QM GFF QFG + R+R+SR+ KT +S+ YGF+EFE+ EVA++VA+ M+ Y L +  LQ+ L+ P +VHP++  G +R+FK + W ++AR+
Sbjct:   49 PVKETATVLYIGHIPHGFYEEQMQGFFQQFGKIKRLRISRNRKTGKSKHYGFLEFENPEVAKVVADEMNNYLLFEHNLQLSLIPPERVHPKLVKGVNRRFKPVDWKAIARK 159

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BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Match: A0A1X6PG87_PORUM (RRM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PG87_PORUM)

HSP 1 Score: 139 bits (349), Expect = 4.690e-38
Identity = 61/106 (57.55%), Postives = 85/106 (80.19%), Query Frame = 0

Query:   34 GVLYVGHIPHGFYEDQMLGFFSQFGTVNRVRVSRSPKTARSRGYGFVEFEDREVARIVAETMHGYFLEKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSVARRR 139
            GV+Y+GH+PHGFYE+Q+ GFFSQFGTV RV+V+RS K+AR++GY FV+F + EVARI AETMHGY +  ++L V L+ P + H R++ GA RK+ +IPW ++ R+R
Sbjct:  113 GVVYIGHLPHGFYEEQLRGFFSQFGTVQRVKVARSKKSARAKGYAFVQFANVEVARIAAETMHGYLMFGRLLDVHLVPPERQHARLWVGAERKWDRIPWRAIERQR 218

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BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Match: A0A383WD88_TETOB (RRM domain-containing protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383WD88_TETOB)

HSP 1 Score: 136 bits (343), Expect = 5.160e-38
Identity = 58/101 (57.43%), Postives = 82/101 (81.19%), Query Frame = 0

Query:   35 VLYVGHIPHGFYEDQMLGFFSQFGTVNRVRVSRSPKTARSRGYGFVEFEDREVARIVAETMHGYFLEKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSV 135
            V+Y+GH+PHGFYED++LGFFSQFG + RVR+SRS KTA+ + Y F+EF+  +VA+I AETM GYF+ K+ L  ++L  ++VHP++F GA+RKFKK+PW  +
Sbjct:   36 VVYIGHLPHGFYEDELLGFFSQFGKLVRVRLSRSKKTAKPKHYAFLEFQHADVAQIAAETMDGYFMFKQKLSCRVLKQSEVHPQLFKGANRKFKKVPWKKI 136

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BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Match: A0A7S3BEE2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BEE2_9EUKA)

HSP 1 Score: 141 bits (356), Expect = 8.640e-38
Identity = 66/111 (59.46%), Postives = 85/111 (76.58%), Query Frame = 0

Query:   28 PTKESAGVLYVGHIPHGFYEDQMLGFFSQFGTVNRVRVSRSPKTARSRGYGFVEFEDREVARIVAETMHGYFLEKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSVARR 138
            PT E AGVLY+GHIPHGFYEDQM GFFSQFGTV+R+R++R+ KT RS+ Y ++EF  REVA+IVA++M+GY +  KVL  KLL   +VHP  F  AHR+FK I   ++ R+
Sbjct:   88 PTPEDAGVLYLGHIPHGFYEDQMRGFFSQFGTVSRLRLARNKKTGRSKHYAYIEFRHREVAQIVAKSMNGYLMFSKVLVCKLLSKEEVHPETFKNAHRRFKIIDRATMVRK 198

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836BMG7_9CHLO	6.950e-42	58.78	RRM domain-containing protein n=1 Tax=Edaphochlamy...	[more]
A0A5A8DFN2_CAFRO	6.650e-40	60.18	RRM domain-containing protein n=2 Tax=Sar TaxID=26...	[more]
D8TQJ3_VOLCA	1.220e-39	59.81	RRM domain-containing protein n=1 Tax=Volvox carte...	[more]
A8J450_CHLRE	2.190e-39	61.68	Predicted protein n=2 Tax=Chlamydomonas TaxID=3052...	[more]
A0A7S1CLL1_9STRA	6.320e-39	55.17	Hypothetical protein (Fragment) n=1 Tax=Bicosoecid...	[more]
A0A6I9S6U9_ELAGV	1.250e-38	53.15	MKI67 FHA domain-interacting nucleolar phosphoprot...	[more]
Q8SAB6_ELAOL	2.510e-38	53.15	RNA binding protein n=2 Tax=Arecaceae TaxID=4710 R...	[more]
A0A1X6PG87_PORUM	4.690e-38	57.55	RRM domain-containing protein n=1 Tax=Porphyra umb...	[more]
A0A383WD88_TETOB	5.160e-38	57.43	RRM domain-containing protein n=2 Tax=Scenedesmace...	[more]
A0A7S3BEE2_9EUKA	8.640e-38	59.46	Hypothetical protein n=1 Tax=Haptolina ericina Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 35..108 e-value: 1.7E-20 score: 84.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 36..105 e-value: 3.1E-16 score: 58.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 34..112 score: 16.62
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 10..117 e-value: 9.4E-23 score: 82.9
None	No IPR available	PANTHER	PTHR46754	FAMILY NOT NAMED	coord: 28..139
None	No IPR available	PANTHER	PTHR46754:SF1	MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN	coord: 28..139
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 26..118

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig65760	contig	M-pyrifera_M_contig65760:835..1251 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig65760.15973.1	mRNA_M-pyrifera_M_contig65760.15973.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig65760 835..1251 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig65760.15973.1 ID=prot_M-pyrifera_M_contig65760.15973.1|Name=mRNA_M-pyrifera_M_contig65760.15973.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp
SARAAWLPAAREALSKFSGPSGIVLGGPTKESAGVLYVGHIPHGFYEDQM
LGFFSQFGTVNRVRVSRSPKTARSRGYGFVEFEDREVARIVAETMHGYFL
EKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSVARRR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf