prot_M-pyrifera_M_contig6534.15894.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6534.15894.1
Unique Nameprot_M-pyrifera_M_contig6534.15894.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length67
Homology
BLAST of mRNA_M-pyrifera_M_contig6534.15894.1 vs. uniprot
Match: D7G0C8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0C8_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 9.530e-23
Identity = 54/67 (80.60%), Postives = 60/67 (89.55%), Query Frame = 0
Query:    1 QVVEDSDHAAVVETLQSLRESEPSLLVAVLDALGNLSLPPSLLGDITVDALGLLESAEAATLPVLVR 67
            +VVED DHA VVETLQSL++SEP LLVAVLDALGNLSLPP LLG IT DALGLL+SA+ +TLPVLVR
Sbjct:  132 EVVEDGDHAEVVETLQSLKDSEPQLLVAVLDALGNLSLPPRLLGGITEDALGLLDSAQPSTLPVLVR 198          
BLAST of mRNA_M-pyrifera_M_contig6534.15894.1 vs. uniprot
Match: A0A7S2RXY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RXY2_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 6.200e-8
Identity = 28/67 (41.79%), Postives = 46/67 (68.66%), Query Frame = 0
Query:    1 QVVEDSDHAAVVETLQSLRESEPSLLVAVLDALGNLSLPPSLLGDITVDALGLLESAEAATLPVLVR 67
            +V+EDS+H+  V+  + + E E  L V ++++LGNL +PP+++G +    LG+LESA  + LPV VR
Sbjct:    1 EVLEDSNHSVAVDRFRQMLECERELTVPIIESLGNLRIPPNMVGALRETVLGILESAPFSDLPVAVR 67          
BLAST of mRNA_M-pyrifera_M_contig6534.15894.1 vs. uniprot
Match: A0A0D2WL35_CAPO3 (Uncharacterized protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WL35_CAPO3)

HSP 1 Score: 52.0 bits (123), Expect = 4.500e-6
Identity = 27/66 (40.91%), Postives = 43/66 (65.15%), Query Frame = 0
Query:    2 VVEDSDHAAVVETLQSLRESEPSLLVAVLDALGNLSLPPSLLGDITVDALGLLESAEAATLPVLVR 67
            ++ D++H  +V+ L  L  SEP L+V +LDAL NL+LPP  + +I    L +L S + + +PV+VR
Sbjct:  465 ILNDAEHRRMVDCLSMLVTSEPKLMVTILDALSNLTLPPHQVDEIRDKILKMLASVDVSDMPVVVR 530          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6534.15894.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0C8_ECTSI9.530e-2380.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2RXY2_9STRA6.200e-841.79Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
A0A0D2WL35_CAPO34.500e-640.91Uncharacterized protein n=2 Tax=Capsaspora owczarz... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029448Fanconi anaemia protein FANCD2PFAMPF14631FancD2coord: 2..67
e-value: 4.9E-7
score: 27.6
IPR029448Fanconi anaemia protein FANCD2PANTHERPTHR32086FAMILY NOT NAMEDcoord: 2..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6534contigM-pyrifera_M_contig6534:13552..13752 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6534.15894.1mRNA_M-pyrifera_M_contig6534.15894.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6534 13552..13752 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6534.15894.1 ID=prot_M-pyrifera_M_contig6534.15894.1|Name=mRNA_M-pyrifera_M_contig6534.15894.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=67bp
QVVEDSDHAAVVETLQSLRESEPSLLVAVLDALGNLSLPPSLLGDITVDA
LGLLESAEAATLPVLVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029448FANCD2