prot_M-pyrifera_M_contig652.15867.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig652.15867.1
Unique Nameprot_M-pyrifera_M_contig652.15867.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length252
Homology
BLAST of mRNA_M-pyrifera_M_contig652.15867.1 vs. uniprot
Match: A0A0P4ZJF0_9CRUS (RNA-directed DNA polymerase n=4 Tax=Daphnia magna TaxID=35525 RepID=A0A0P4ZJF0_9CRUS)

HSP 1 Score: 99.4 bits (246), Expect = 5.340e-20
Identity = 67/244 (27.46%), Postives = 119/244 (48.77%), Query Frame = 0
Query:   10 PVANLRDANIGQTSPAEKERIRDLLEQYIDIFAVNPKVVGACEGSPMILELNDPKCSINVAH-PRSYTSEQRQMIQEEVSKLSKAGAIQPSHSTWASACRTVRKKDGTVCVVQDFRGLNAFLKEQSRGLGNLSTIFDEMGGSNCSACLDLASGFLQLTIQEPDRHLTVFRDAESKLWEYVRCGFGLKPVPSAFANYVGGQLMPVKMKGVRNWLDGIINPTATVEDQFALLQEVFDLIRASHLSV 252
            P+ +     I +  P  +  +  LL  + D+FA     +G    + +I    D +    +   P   T+ QR++++++V ++  A  I+ S S WAS    V KK+G +    D+R LN+  K+ S  +  +    D++ G      LDLASG+ Q+ + +PD   T F   E+ L+E+ R  FGL   P+ F   +   L  V       +LD +I  + T E     ++E+F+L++A++L +
Sbjct:  105 PIESREPIVISEVDPEFQAPLSQLLNDFHDLFASKDSELG---NTNLIKHTIDTEGRGPIRQRPYRVTNNQRKLLEDKVQEMLDAKVIRYSQSPWASPVVLVEKKNGEIRFCVDYRKLNSITKKDSFPMPRIDETLDKLYGKKFFTTLDLASGYWQIQVHDPDIEKTAFV-VENNLYEFERMAFGLCNAPATFQRLMNYVLRDVLGNKALVYLDDVIIFSDTFESHLNDIREIFNLLKAANLKL 344          
BLAST of mRNA_M-pyrifera_M_contig652.15867.1 vs. uniprot
Match: UPI000DF3D4F6 (LOW QUALITY PROTEIN: uncharacterized protein LOC112845972 n=1 Tax=Oreochromis niloticus TaxID=8128 RepID=UPI000DF3D4F6)

HSP 1 Score: 96.3 bits (238), Expect = 6.410e-19
Identity = 66/226 (29.20%), Postives = 112/226 (49.56%), Query Frame = 0
Query:   26 EKERIRDLLEQYIDIFAVNPKVVGACEGSPMILELNDPKCSINV-AHPRSYTSEQRQMIQEEVSKLSKAGAIQPSHSTWASACRTVRKKDGTVCVVQDFRGLNAFLKEQSRGLGNLSTIFDEMGGSNCSACLDLASGFLQLTIQEPDRHLTVFRDAESKLWEYVRCGFGLKPVPSAFANYVGGQLMPVKMKGVRNWLDGIINPTATVEDQFALLQEVFDLIRASHL 250
            +++R+R LL++ +DIFA + K    C  + ++    D   +  +   P      +RQ+ +E++ +++ AG I+PS+S WA+    V KKDG+     DFR LNA  K+ S  L  +    D + GS+  + LDL SG+ Q+ +    R  T F   +  LW++    FGL   P+ F   +   L+ +       +LD ++      +   + L EVF  IR + L
Sbjct:  383 QRQRLRCLLDENVDIFAASDK---DCRQTGLVQHTIDTGSAQPIHLRPHRPPLSKRQVAEEKIREMAAAGVIEPSNSPWAAPVVLVGKKDGSPRFCVDFRRLNAVTKKDSYPLPRIDEALDYVTGSSWFSSLDLRSGYWQVELAPKXRPKTAFTIGQG-LWQFRVMPFGLCNAPATFERLMERVLVNIPRSRCVVYLDDLLVHGGDFDSALSHLSEVFSAIRQAGL 604          
BLAST of mRNA_M-pyrifera_M_contig652.15867.1 vs. uniprot
Match: UPI001C2D241E (uncharacterized protein LOC121813519 n=1 Tax=Haplochromis burtoni TaxID=8153 RepID=UPI001C2D241E)

HSP 1 Score: 95.9 bits (237), Expect = 8.360e-19
Identity = 65/226 (28.76%), Postives = 111/226 (49.12%), Query Frame = 0
Query:   26 EKERIRDLLEQYIDIFAVNPKVVGACEGSPMILELNDPKCSINVA-HPRSYTSEQRQMIQEEVSKLSKAGAIQPSHSTWASACRTVRKKDGTVCVVQDFRGLNAFLKEQSRGLGNLSTIFDEMGGSNCSACLDLASGFLQLTIQEPDRHLTVFRDAESKLWEYVRCGFGLKPVPSAFANYVGGQLMPVKMKGVRNWLDGIINPTATVEDQFALLQEVFDLIRASHL 250
            +++R+R LL++ +DIFA + K    C  + ++    D   +  +   P      +RQ+ +E++ +++ AG I+PS+S WA+    V KKDG+     DFR LNA  K+ S  L  +    D + GS+  + LDL SG+ Q+ +    R  T F   +  LW++    FGL   P+ F   +   L+ +       +LD ++      +   + L EV   IR + L
Sbjct:  511 QRQRLRCLLDENVDIFAASDK---DCRQTSLVQHTIDTSSAQPIRLRPHRLPLSKRQVAEEKIREMAAAGVIEPSNSPWAAPVVLVGKKDGSPRFCVDFRRLNAVTKKDSYPLPRIDEALDYVTGSSWFSSLDLRSGYWQVELAPEARPKTAFTIGQG-LWQFRVMPFGLCNAPATFERLMERVLVDIPCSRCVVYLDDLLVHGGDFDSALSHLSEVLSAIRRAGL 732          
BLAST of mRNA_M-pyrifera_M_contig652.15867.1 vs. uniprot
Match: UPI0013B35F11 (uncharacterized protein LOC116725923 n=1 Tax=Xiphophorus helleri TaxID=8084 RepID=UPI0013B35F11)

HSP 1 Score: 94.7 bits (234), Expect = 2.000e-18
Identity = 71/250 (28.40%), Postives = 118/250 (47.20%), Query Frame = 0
Query:    2 LTEKEEESPVANLRDANIGQTSPAEKERIRDLLEQYIDIFAVNPKVVGACEGSPMIL-ELNDPKCSINVAHPRSYTSEQRQMIQEEVSKLSKAGAIQPSHSTWASACRTVRKKDGTVCVVQDFRGLNAFLKEQSRGLGNLSTIFDEMGGSNCSACLDLASGFLQLTIQEPDRHLTVFRDAESKLWEYVRCGFGLKPVPSAFANYVGGQLMPVKMKGVRNWLDGIINPTATVEDQFALLQEVFDLIRASHL 250
            L  +E    V  L   + G     + ER++DLLE YIDIFA   +    C  + ++  +++  +       P      +R + ++++ ++ KA  I+PS+S WA+    V KKD       D+R LN   ++ S  L  +    D + GS+  + LDL SG+ Q+ +    R  T F   + +LW++    FGL   P+ F   +   L  +       +LD ++    + E   A LQEVFD IR ++L
Sbjct:  100 LPSEETRQAVRELCLRSCGGLGQEQSERLQDLLEAYIDIFAAKDE---ECTRTNLVQHDIDTGETRPIRLRPHRLPFSRRAVAEKKIEEMLKADVIEPSNSPWAAPVVLVGKKDKDWRFCVDYRRLNENTRKDSYPLPRIDDTLDYIAGSSWFSSLDLRSGYWQVELSPEARPKTAFTIGQ-ELWQFKVMPFGLCNAPATFELLMERVLAHIPRSRCAVYLDDLLVHADSFEAALANLQEVFDTIRQANL 345          
BLAST of mRNA_M-pyrifera_M_contig652.15867.1 vs. uniprot
Match: A0A669CP14_ORENI (Ribonuclease H n=2 Tax=Oreochromis niloticus TaxID=8128 RepID=A0A669CP14_ORENI)

HSP 1 Score: 93.2 bits (230), Expect = 5.880e-18
Identity = 65/226 (28.76%), Postives = 111/226 (49.12%), Query Frame = 0
Query:   26 EKERIRDLLEQYIDIFAVNPKVVGACEGSPMILELNDPKCSINVA-HPRSYTSEQRQMIQEEVSKLSKAGAIQPSHSTWASACRTVRKKDGTVCVVQDFRGLNAFLKEQSRGLGNLSTIFDEMGGSNCSACLDLASGFLQLTIQEPDRHLTVFRDAESKLWEYVRCGFGLKPVPSAFANYVGGQLMPVKMKGVRNWLDGIINPTATVEDQFALLQEVFDLIRASHL 250
            +++R+R LL++ +DIFA + K    C  + ++    D   +  +   P      +RQ+ +E++ +++ AG I+PS+S WA+    V KKDG+     DFR LNA  K+ S  L  +    D + GS+  +  DL SG+ Q+ +    R  T F   +  LW++    FGL   P+ F   +   L+ +       +LD ++      +   + L EVF  IR + L
Sbjct:  137 QRQRLRCLLDENVDIFAASDK---DCRQTGLVQHTIDTGSAQPIRLRPHRLPLSKRQVAEEKIREMAAAGVIEPSNSPWAAPVVLVGKKDGSPRFCVDFRRLNAVTKKDSYPLPRIDEALDYVTGSSWFSSHDLRSGYWQVELAPEARPKTAFTIGQG-LWQFRVMPFGLCNAPATFERLMERVLVNIPRSRRVVYLDDLLVHGGDFDSALSHLSEVFSAIRRAGL 358          
BLAST of mRNA_M-pyrifera_M_contig652.15867.1 vs. uniprot
Match: UPI0009E5F979 (uncharacterized protein LOC110067018 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E5F979)

HSP 1 Score: 93.2 bits (230), Expect = 7.580e-18
Identity = 69/249 (27.71%), Postives = 118/249 (47.39%), Query Frame = 0
Query:    4 EKEEESPVANLRDANIGQTSPAEKERIRDLLEQYIDIFAVNPKVVGACEGSPMILELNDPKCSINVAHPRSYTSEQRQMIQEEVSKLSKAGAIQPSHSTWASACRTVRKKDGTVCVVQDFRGLNAFLKEQSRGLGNLSTIFDEMGGSNCSACLDLASGFLQLTIQEPDRHLTVFRDAESKLWEYVRCGFGLKPVPSAFANYVGGQLMPVKMKGVRNWLDGIINPTATVEDQFALLQEVFDLIRASHLSV 252
            ++++E PV    D      +  ++ER++ LL +Y DIFAV P+ +G        ++  D +   +  +   +T  Q++ I+  ++ +     IQPS S WAS    V K DG+     DFR LN   K+ S  L  +S   + +GG+   + +DL SG+ Q+ +    R  T F    + L+E+    FGL   P  F   +   L  +  +    +LD ++  + T E+    L+ VFD  R + L +
Sbjct: 1188 QEQDEVPV----DLQSSSLTQEQQERLKALLNEYRDIFAVTPEELGRTNLVQHHIDTGDHRPLRSRPYRVPHT--QKETIESHINDMLSRDVIQPSASPWASPVVLVPKPDGSSRFCCDFRNLNKITKKDSYPLPLISESLEALGGAKFFSSVDLLSGYWQVEMDPASREKTAFV-THAGLYEFTTMPFGLCNAPGTFQRLMECVLRGLTWQIALIYLDDVLIYSRTFEEHLQHLRLVFDRFREAGLKL 1429          
BLAST of mRNA_M-pyrifera_M_contig652.15867.1 vs. uniprot
Match: A0A815W8Z1_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815W8Z1_9BILA)

HSP 1 Score: 89.4 bits (220), Expect = 1.490e-17
Identity = 57/179 (31.84%), Postives = 93/179 (51.96%), Query Frame = 0
Query:   23 SPAEKERIRDLLEQYIDIFAVNPKVVGACEGSPMILELNDPKCSINVAHPRSYTSEQRQMIQEEVSKLSKAGAIQPSHSTWASACRTVRKKDGTVCVVQDFRGLNAFLKEQSRGLGNLSTIFDEMGGSNCSACLDLASGFLQLTIQEPDRHLTVFRDAESKLWEYVRCGFGLKPVPSAF 201
            +P +K++IR ++EQ+  IF      +     +  I         +N    R +T +QR ++  E++K+ KAG I+PS+S W+S    V+KKDG+V  V D+R LN    + S  + ++      + G    + LDL +G+ Q+ IQE DR  T F    + L+E+     GLK  P +F
Sbjct:   78 NPRQKQQIRQIMEQHYRIFDTTSPAIAKTNITHTIR--TGDHAPVNSRPYRLHTQQQR-VLTGEINKMLKAGQIRPSNSPWSSPVLLVKKKDGSVRFVVDYRKLNNITIKDSYPIPHIEETLSRLNGHRFFSKLDLKTGYYQIPIQEVDRQKTAFI-IPNGLFEFNVLAMGLKNAPPSF 252          
BLAST of mRNA_M-pyrifera_M_contig652.15867.1 vs. uniprot
Match: A0A0V1NG97_9BILA (Retrovirus-related Pol polyprotein from transposon (Fragment) n=4 Tax=Trichinella TaxID=6333 RepID=A0A0V1NG97_9BILA)

HSP 1 Score: 91.7 bits (226), Expect = 2.150e-17
Identity = 56/181 (30.94%), Postives = 89/181 (49.17%), Query Frame = 0
Query:   72 PRSYTSEQRQMIQEEVSKLSKAGAIQPSHSTWASACRTVRKKDGTVCVVQDFRGLNAFLKEQSRGLGNLSTIFDEMGGSNCSACLDLASGFLQLTIQEPDRHLTVFRDAESKLWEYVRCGFGLKPVPSAFANYVGGQLMPVKMKGVRNWLDGIINPTATVEDQFALLQEVFDLIRASHLSV 252
            PR     QR+++   + ++  AG I+P+   W+S    VRKKDG+     D+R LNA  +  ++ L  +    D + GS   + LDLASG+ Q+ + EPDR  T F      L+++    FGL   P+ F   +   L  +  KG   +LD II    T E+    L+ V   +++  L +
Sbjct:  533 PRRLPQAQREVVDRLIREMLHAGVIEPASGPWSSPVVLVRKKDGSPRFCVDYRRLNAITRVDAQPLPRIDDTLDALAGSQWFSTLDLASGYWQVEVAEPDREKTAF-STPMGLFQFRVMPFGLCNAPATFQRLMENALRGLTFKGCLVYLDDIIVYGRTEEEHLERLEGVLSRLQSVGLKI 712          
BLAST of mRNA_M-pyrifera_M_contig652.15867.1 vs. uniprot
Match: A0A225VP24_9STRA (Gag-pol fusion protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VP24_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 4.570e-17
Identity = 66/227 (29.07%), Postives = 105/227 (46.26%), Query Frame = 0
Query:    6 EEESPVANLRDANIGQTSPAEKERIRDLLEQYIDIFAVNPKVVGACEGSPMILELNDPKCSINVAHPRSYTSEQRQMIQEE-------VSKLSKAGAIQPSHSTWASACRTVRKKDGTVCVVQDFRGLNAFLKEQSRGLGNLSTIFDEMGGSNCSACLDLASGFLQLTIQEPDRHLTVFRDAESKLWEYVRCGFGLKPVPSAFANYVGGQLMPVKMKGVRNWLDGII 225
            E+++P+ N  + NIG    A++  I+ LL+ Y ++ A +    G C  +  +    D +  I+         ++R+M Q E       V K+  AG I+ ++  W      VRKKDG V    D+R LNA  K+    L  +    + +GG+     LDL SG+ Q+ + + D+  T F    S L+ +VR  FGL   PS F   +   L  +       +LD II
Sbjct:  540 EDDTPLVNEHEMNIGSEERADRALIKRLLQVYREVVADS----GDCPPATTL----DVEHHIDTGDTAPIMMKRRRMAQTENVVAEDNVRKMLAAGVIEEANGAWGFPVVLVRKKDGEVRFCVDYRALNAVTKKDVYPLPRIDETLEALGGALLFTTLDLRSGYWQIRVADVDKDKTAFT-TRSGLYRFVRMPFGLSNAPSTFQRMMNSVLRGLTWSTCLVYLDDII 757          
BLAST of mRNA_M-pyrifera_M_contig652.15867.1 vs. uniprot
Match: A0A0V0RD69_9BILA (Retrovirus-related Pol polyprotein from transposon 17.6 (Fragment) n=1 Tax=Trichinella nelsoni TaxID=6336 RepID=A0A0V0RD69_9BILA)

HSP 1 Score: 90.5 bits (223), Expect = 5.020e-17
Identity = 64/236 (27.12%), Postives = 109/236 (46.19%), Query Frame = 0
Query:   17 ANIGQTSPAEKERIRDLLEQYIDIFAVNPKVVGACEGSPMILELNDPKCSINVAHPRSYTSEQRQMIQEEVSKLSKAGAIQPSHSTWASACRTVRKKDGTVCVVQDFRGLNAFLKEQSRGLGNLSTIFDEMGGSNCSACLDLASGFLQLTIQEPDRHLTVFRDAESKLWEYVRCGFGLKPVPSAFANYVGGQLMPVKMKGVRNWLDGIINPTATVEDQFALLQEVFDLIRASHLSV 252
            A+  + S   K+ +  +L Q+    + N   +G        +E  + +       PR     QR +++  V ++ ++G I+P+   W+S    VRKKDG+     D+R LNA  +  ++ L  +    D + GS   + LDLASG+ Q+ + EPDR  T F      L+++    FGL   P+ F   +   L  +  KG   +LD II    T E+    L +V   +++  L +
Sbjct:   90 ADAAECSETGKQTLESILRQHSRAISRNDDDLGRTSLVTHRIETGEARPIKQP--PRRLPVAQRSVMERLVGQMLESGVIEPASGPWSSPVVLVRKKDGSPRFCVDYRRLNAVTRVDAQPLPRIDDTLDALAGSQWFSTLDLASGYWQVEVAEPDREKTAF-STPMGLFQFRVMPFGLCNAPATFQRLMENVLRGLTFKGCLVYLDDIIVYGRTEEEHLERLAKVLHRLQSVGLKI 322          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig652.15867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0P4ZJF0_9CRUS5.340e-2027.46RNA-directed DNA polymerase n=4 Tax=Daphnia magna ... [more]
UPI000DF3D4F66.410e-1929.20LOW QUALITY PROTEIN: uncharacterized protein LOC11... [more]
UPI001C2D241E8.360e-1928.76uncharacterized protein LOC121813519 n=1 Tax=Haplo... [more]
UPI0013B35F112.000e-1828.40uncharacterized protein LOC116725923 n=1 Tax=Xipho... [more]
A0A669CP14_ORENI5.880e-1828.76Ribonuclease H n=2 Tax=Oreochromis niloticus TaxID... [more]
UPI0009E5F9797.580e-1827.71uncharacterized protein LOC110067018 n=1 Tax=Orbic... [more]
A0A815W8Z1_9BILA1.490e-1731.84Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A0V1NG97_9BILA2.150e-1730.94Retrovirus-related Pol polyprotein from transposon... [more]
A0A225VP24_9STRA4.570e-1729.07Gag-pol fusion protein n=1 Tax=Phytophthora megaka... [more]
A0A0V0RD69_9BILA5.020e-1727.12Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 135..251
e-value: 4.3E-35
score: 123.0
NoneNo IPR availableGENE3D3.10.10.10coord: 63..196
e-value: 4.3E-35
score: 123.0
NoneNo IPR availablePANTHERPTHR24559:SF299coord: 30..245
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 30..245
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 33..250

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig652contigM-pyrifera_M_contig652:22738..23493 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig652.15867.1mRNA_M-pyrifera_M_contig652.15867.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig652 22738..23493 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig652.15867.1 ID=prot_M-pyrifera_M_contig652.15867.1|Name=mRNA_M-pyrifera_M_contig652.15867.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=252bp
RLTEKEEESPVANLRDANIGQTSPAEKERIRDLLEQYIDIFAVNPKVVGA
CEGSPMILELNDPKCSINVAHPRSYTSEQRQMIQEEVSKLSKAGAIQPSH
STWASACRTVRKKDGTVCVVQDFRGLNAFLKEQSRGLGNLSTIFDEMGGS
NCSACLDLASGFLQLTIQEPDRHLTVFRDAESKLWEYVRCGFGLKPVPSA
FANYVGGQLMPVKMKGVRNWLDGIINPTATVEDQFALLQEVFDLIRASHL
SV
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