prot_M-pyrifera_M_contig65198.15866.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig65198.15866.1
Unique Nameprot_M-pyrifera_M_contig65198.15866.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length202
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65198.15866.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006652Kelch repeat type 1SMARTSM00612kelc_smartcoord: 70..117
e-value: 2.3
score: 8.6
coord: 21..69
e-value: 0.06
score: 22.4
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 12..55
e-value: 8.0E-6
score: 25.3
coord: 113..151
e-value: 8.5E-6
score: 25.3
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 1..202
e-value: 2.5E-32
score: 113.9
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 4..201
NoneNo IPR availablePANTHERPTHR24412FAMILY NOT NAMEDcoord: 9..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig65198contigM-pyrifera_M_contig65198:721..1326 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig65198.15866.1mRNA_M-pyrifera_M_contig65198.15866.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig65198 721..1329 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig65198.15866.1 ID=prot_M-pyrifera_M_contig65198.15866.1|Name=mRNA_M-pyrifera_M_contig65198.15866.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=202bp
MRGTPMPVATLHAPSVSFSGGLVVLGGVNGSSSTSAVWRYELSPTGGKWS
SLPSMLASLTAHAVVATSSRIYVFGGVDASTAAPTAAVSYFDGKMWQKCS
PAPLGPFSSASAAPLSDNEIYILGGSTPAFPTASSVLHMYYTETDTWNTI
SRAPYATLSPFLFTLPNGQLLVTAGDAAKPGDSPSPSNQTLIYNPNTTSW
TQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006652Kelch_1
IPR015915Kelch-typ_b-propeller