prot_M-pyrifera_M_contig13524.5983.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13524.5983.1
Unique Nameprot_M-pyrifera_M_contig13524.5983.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length166
Homology
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Match: D7G1C0_ECTSI (Lissencephaly-1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C0_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 5.690e-62
Identity = 107/136 (78.68%), Postives = 120/136 (88.24%), Query Frame = 0
Query:    1 MRSQGEAFDEAAEAFASATGLEDSSGNEGAKGLLEKKWTSVVRLQRKVMDLEARLEQAQQDLRSGLRPGRDKGGXXXXXXSDRILPRAPAKSVLAGHRSPVTCVALHPLYSIVASSSEDATIKVWDYETGECERTL 136
            M+ QGE F +AA AFA ATGLED++GNE  +GLLEKKWTSVVRLQRKVMDLEARL+QAQQDL+SG+RPGR+KG       SDR+LPRAPAK VL GHR+PVTCVALHPLYS+VASSSEDAT+KVWDYETGECERTL
Sbjct:   19 MKGQGEDFADAAAAFAVATGLEDATGNESFRGLLEKKWTSVVRLQRKVMDLEARLDQAQQDLKSGVRPGREKGAGG----SDRVLPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTL 150          
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Match: A0A418AZ71_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AZ71_9STRA)

HSP 1 Score: 152 bits (384), Expect = 3.500e-43
Identity = 85/155 (54.84%), Postives = 109/155 (70.32%), Query Frame = 0
Query:    5 GEAFDEAAEAFASATGLEDSSGNEGAK-GLLEKKWTSVVRLQRKVMDLEARLEQAQQDLR-SGLRPGRDKGGXXXXXXSDRILPRAPAKSVLAGHRSPVTCVALHPLYSIVASSSEDATIKVWDYETGECERTLKGHTNVVQSVTFSPDGQALAS 157
            G  F ++A AF    GL  +  ++  K GLLEKKWTSVVRLQRKVM+LE++++Q ++D +  G+   RD  G      S   LPRAP K  ++GHRSP+TCV  HP++S+V +SSEDATIKVWD+ETGE ERTLKGHTN VQSV F+P G  L +
Sbjct:   23 GSTFAQSASAFQQDAGLMMTGESDTTKTGLLEKKWTSVVRLQRKVMELESKIQQLEEDAKLGGVVSRRDVIGIGHDASS--FLPRAPPKHSMSGHRSPITCVVFHPVFSVVVTSSEDATIKVWDFETGEFERTLKGHTNAVQSVAFNPTGTLLGT 175          
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Match: H2YVD8_CIOSA (LisH domain-containing protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2YVD8_CIOSA)

HSP 1 Score: 144 bits (364), Expect = 1.360e-40
Identity = 80/158 (50.63%), Postives = 104/158 (65.82%), Query Frame = 0
Query:    1 MRSQGEAFDEAAEAFASATGLEDSSGNEGAKGLLEKKWTSVVRLQRKVMDLEARLEQAQQDLRSGLRPGRDKGGXXXXXXSDRILPRAPAKSVLAGHRSPVTCVALHPLYSIVASSSEDATIKVWDYETGECERTLKGHTNVVQSVTFSPDGQALASC 158
            +RS G  + +A EAF     L D    +   GL+EKKWTSVVRLQRKVMDLEA+L +  ++ R G+ P   K            +PR P +  L+GHRSP+T V  HP+Y +V S++ED+TIKVWDYETG+ ERTLKGHT+ VQ ++F P G+ LASC
Sbjct:   19 LRSNG--YSKALEAFKEEADLSDQVDKK-YDGLMEKKWTSVVRLQRKVMDLEAKLNELTKETRDGITPQHKKD-------PSEWIPRPPERYALSGHRSPITRVIFHPVYGLVLSAAEDSTIKVWDYETGDFERTLKGHTDSVQDISFDPTGKILASC 166          
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Match: A0A482WL60_LAOST (LisH domain-containing protein n=1 Tax=Laodelphax striatellus TaxID=195883 RepID=A0A482WL60_LAOST)

HSP 1 Score: 141 bits (355), Expect = 1.380e-39
Identity = 74/134 (55.22%), Postives = 93/134 (69.40%), Query Frame = 0
Query:   32 GLLEKKWTSVVRLQRKVMDLEARLEQAQQDLRSGLRPGRDKGGXXXXXXSDRILPRAPAKSVLAGHRSPVTCVALHPLYSIVASSSEDATIKVWDYETGECERTLKGHTNVVQSVTFSPDGQALASCGADTTIK 165
            GLLEKKWTSV+RLQ+KVM+LE++L +A+++   G  P R K            +PR P K  LAGHR+PVT V  HP++S+  SSSEDATIKVWDYETGE ER LKGHT+ VQ + F   G+ L SC AD ++K
Sbjct:   49 GLLEKKWTSVIRLQKKVMELESKLSEAEKEFIEGA-PTRAKRSPTEW------IPRPPEKFCLAGHRAPVTKVIFHPVFSLAVSSSEDATIKVWDYETGEYERALKGHTDAVQDIAFDQSGKLLVSCSADMSVK 175          
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Match: A0A183HCR9_9BILA (LisH domain-containing protein n=1 Tax=Onchocerca flexuosa TaxID=387005 RepID=A0A183HCR9_9BILA)

HSP 1 Score: 137 bits (346), Expect = 2.650e-38
Identity = 77/148 (52.03%), Postives = 103/148 (69.59%), Query Frame = 0
Query:    8 FDEAAEAFASATGLEDSSGNEGAKGLLEKKWTSVVRLQRKVMDLEARLEQAQQDLRSGLRPGRDKGGXXXXXXSDRILPRAPAKSVLAGHRSPVTCVALHPLYSIVASSSEDATIKVWDYETGECERTLKGHTNVVQSVTFSPDGQAL 155
            ++E+ +AF   TGL ++   +   GLLEKKWTSVVRLQ+KVMDLEA+L++A+++   G  P R+K            +PR P K  L GHRSP+T V  HP+YSI+ASSSED+TIKVWD+ETG+ ER+LKGHT+ VQ + F   G+ L
Sbjct:   26 YNESFDAFRRETGLMENDDKK-VMGLLEKKWTSVVRLQKKVMDLEAKLQEAEREYIHGA-PTREK------RQPGEWIPRPPEKFCLNGHRSPITRVIFHPVYSIIASSSEDSTIKVWDFETGDFERSLKGHTDAVQDIAFDNSGKLL 165          
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Match: A0A6H5JKZ3_9PHAE (Ge1_WD40 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKZ3_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 4.410e-38
Identity = 69/88 (78.41%), Postives = 78/88 (88.64%), Query Frame = 0
Query:   49 MDLEARLEQAQQDLRSGLRPGRDKGGXXXXXXSDRILPRAPAKSVLAGHRSPVTCVALHPLYSIVASSSEDATIKVWDYETGECERTL 136
            M+LEARL+QAQ DL+SG+RPGR+KG       SDR+LPRAPAK VL GHR+PVTCVALHPLYS+VASSSEDAT+KVWDYETGECERTL
Sbjct:    1 MELEARLDQAQDDLKSGVRPGREKGAGG----SDRVLPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTL 84          
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Match: A0A3R7BSP6_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BSP6_9STRA)

HSP 1 Score: 141 bits (355), Expect = 7.570e-38
Identity = 79/162 (48.77%), Postives = 110/162 (67.90%), Query Frame = 0
Query:    5 GEAFDEAAEAFASATGLEDSSGNEGAK-GLLEKKWTSVVRLQRKVMDLEARLEQAQQDLR-SGLRPGRDKGGXXXXXXSDRILPRAPAKSVLAGHRSPVTCVALHPLYSIVASSSEDATIKVWDYETGECERTLKGHTNVVQSVTFSPDGQALASCGADTTI 164
            G  F ++A AF    GL  +  ++  K GLLEKKWTSVVRLQRKVM+LE++++Q ++D +  G+   RD  G      +   LPRAP K  ++GHRSP+TCV  HP++S+V +SSEDATIK+W+ E+G C +TLKGH++ V+ +  + DGQ LAS G D  I
Sbjct:   19 GSTFAQSATAFQQDAGLTMAGESDTTKTGLLEKKWTSVVRLQRKVMELESKIQQLEEDSKLGGVVSRRDVTGIGRDPST--FLPRAPPKYSMSGHRSPITCVVFHPVFSVVVTSSEDATIKIWEVESGYCTQTLKGHSDWVRDICITDDGQFLASGGNDRAI 178          
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Match: A0A0N5CJK4_THECL (Lissencephaly-1 homolog n=1 Tax=Thelazia callipaeda TaxID=103827 RepID=A0A0N5CJK4_THECL)

HSP 1 Score: 139 bits (351), Expect = 1.500e-36
Identity = 81/159 (50.94%), Postives = 105/159 (66.04%), Query Frame = 0
Query:    8 FDEAAEAFASATGLEDSSGNEGAKGLLEKKWTSVVRLQRKVMDLEARLEQAQQDLRSGLRPGRDKGGXXXXXXSDRILPRAPAKSVLAGHRSPVTCVALHPLYSIVASSSEDATIKVWDYETGECERTLKGHTNVVQSVTFSPDGQALASCGADTTIKV 166
            + E+ +AF   TGL  +   +   GLLEKKWTSVVRLQ+KVMDLEA+L++A+++   G  P R+K            +PR P K  L GHRSP+T V  HP+YSI+ASSSED+TIKVWD+ETG+ ER+LKGHT+ VQ + F        SC AD  IK+
Sbjct:   26 YSESLDAFRRETGLIQNDDKK-VTGLLEKKWTSVVRLQKKVMDLEAKLQEAEREYIHGA-PTREK------RQPGEWIPRPPEKFSLTGHRSPITRVIFHPVYSIIASSSEDSTIKVWDFETGDFERSLKGHTDAVQDLAFDT-----TSCSADMAIKI 171          
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Match: A0A7S0SXC9_9STRA (Lissencephaly-1 homolog n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXC9_9STRA)

HSP 1 Score: 135 bits (340), Expect = 7.990e-35
Identity = 71/146 (48.63%), Postives = 99/146 (67.81%), Query Frame = 0
Query:    8 FDEAAEAFASATGLEDSSGNEGAKGLLEKKWTSVVRLQRKVMDLEARLEQAQQDLRSGLRPGRDKGGXXXXXXS----DRILPRAPAKSVLAGHRSPVTCVALHPLYSIVASSSEDATIKVWDYETGECERTLKGHTNVVQSVTFS 149
            F    EAF +   + D   N+  KG+LEKKWTSVVRLQ++VM+LE +L   Q+ L+SG+     +        +    +R++P+ PAK+ L+GHR PVTC+A HP+YS+VAS SED+TIK+WDYET + +RTLKGHT  +  V+FS
Sbjct:   28 FPRTIEAFKTEAQISDI--NDVDKGILEKKWTSVVRLQKRVMELETQLNDLQKQLKSGIATNGIENDTLKTNATIGENNRLIPKGPAKASLSGHRGPVTCIATHPIYSLVASGSEDSTIKLWDYETNQYDRTLKGHTGTITGVSFS 171          
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Match: A0A5B7D5V3_PORTR (Lissencephaly-1 n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=A0A5B7D5V3_PORTR)

HSP 1 Score: 129 bits (323), Expect = 1.640e-34
Identity = 67/125 (53.60%), Postives = 88/125 (70.40%), Query Frame = 0
Query:   32 GLLEKKWTSVVRLQRKVMDLEARLEQAQQDLRSGLRPGRDKGGXXXXXXSDRILPRAPAKSVLAGHRSPVTCVALHPLYSIVASSSEDATIKVWDYETGECERTLKGHTNVVQSVTFSPDGQALA 156
            GLLEKKW SV+RLQ+KVM+LE +L +A+++  +G  P RDK            +PR P K  L GHR+PVT V +HP+YS++ SSSED TIKVWDYETG+ E+TLKGHT+ +Q + F   G+ LA
Sbjct:   40 GLLEKKWCSVIRLQKKVMELEVKLNEAEREYIAGA-PTRDKRSP------SEWIPRPPEKYCLTGHRAPVTRVIIHPMYSLMVSSSEDGTIKVWDYETGDYEKTLKGHTDSIQDIAFDHGGKFLA 157          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13524.5983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1C0_ECTSI5.690e-6278.68Lissencephaly-1 homolog n=1 Tax=Ectocarpus silicul... [more]
A0A418AZ71_9STRA3.500e-4354.84Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
H2YVD8_CIOSA1.360e-4050.63LisH domain-containing protein n=1 Tax=Ciona savig... [more]
A0A482WL60_LAOST1.380e-3955.22LisH domain-containing protein n=1 Tax=Laodelphax ... [more]
A0A183HCR9_9BILA2.650e-3852.03LisH domain-containing protein n=1 Tax=Onchocerca ... [more]
A0A6H5JKZ3_9PHAE4.410e-3878.41Ge1_WD40 domain-containing protein (Fragment) n=1 ... [more]
A0A3R7BSP6_9STRA7.570e-3848.77Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A0N5CJK4_THECL1.500e-3650.94Lissencephaly-1 homolog n=1 Tax=Thelazia callipaed... [more]
A0A7S0SXC9_9STRA7.990e-3548.63Lissencephaly-1 homolog n=1 Tax=Chromulina nebulos... [more]
A0A5B7D5V3_PORTR1.640e-3453.60Lissencephaly-1 n=1 Tax=Portunus trituberculatus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 41..61
NoneNo IPR availableGENE3D1.20.960.30coord: 2..68
e-value: 6.0E-17
score: 63.3
NoneNo IPR availablePANTHERPTHR44129:SF1LISSENCEPHALY-1 HOMOLOGcoord: 17..166
NoneNo IPR availablePANTHERPTHR44129FAMILY NOT NAMEDcoord: 17..166
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 87..126
e-value: 4.2E-8
score: 42.9
coord: 129..166
e-value: 1.8E-4
score: 30.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 130..166
e-value: 9.1E-8
score: 32.7
coord: 93..126
e-value: 3.8E-7
score: 30.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 136..166
score: 13.483
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 94..135
score: 16.39
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 79..166
e-value: 4.3E-29
score: 103.6
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 94..166
score: 24.6
IPR037190LIS1, N-terminalSUPERFAMILY109925Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domaincoord: 22..60
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 91..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13524contigM-pyrifera_M_contig13524:405..4265 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13524.5983.1mRNA_M-pyrifera_M_contig13524.5983.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13524 375..4265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13524.5983.1 ID=prot_M-pyrifera_M_contig13524.5983.1|Name=mRNA_M-pyrifera_M_contig13524.5983.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=166bp
MRSQGEAFDEAAEAFASATGLEDSSGNEGAKGLLEKKWTSVVRLQRKVMD
LEARLEQAQQDLRSGLRPGRDKGGGGGGGGSDRILPRAPAKSVLAGHRSP
VTCVALHPLYSIVASSSEDATIKVWDYETGECERTLKGHTNVVQSVTFSP
DGQALASCGADTTIKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR037190LIS1_N
IPR036322WD40_repeat_dom_sf