prot_M-pyrifera_M_contig13500.5976.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13500.5976.1
Unique Nameprot_M-pyrifera_M_contig13500.5976.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length37
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig13500.5976.1 vs. uniprot
Match: D7FTL5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL5_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 6.450e-9
Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 0 
Query:    7 EATFKQELEVIVYCGGGTAGPTGLAVGVGRR 37
            EATF  EL+VIVYCGGGTAGPTGLAVGVGR+
Sbjct:  143 EATFGSELDVIVYCGGGTAGPTGLAVGVGRQ 173
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13500.5976.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTL5_ECTSI6.450e-987.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13500contigM-pyrifera_M_contig13500:8556..8666 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13500.5976.1mRNA_M-pyrifera_M_contig13500.5976.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13500 8556..8666 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13500.5976.1 ID=prot_M-pyrifera_M_contig13500.5976.1|Name=mRNA_M-pyrifera_M_contig13500.5976.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=37bp
MTTTTTEATFKQELEVIVYCGGGTAGPTGLAVGVGRR
back to top