prot_M-pyrifera_M_contig13460.5966.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13460.5966.1
Unique Nameprot_M-pyrifera_M_contig13460.5966.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length210
Homology
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BLAST of mRNA_M-pyrifera_M_contig13460.5966.1 vs. uniprot
Match: D7FMA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMA1_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 2.200e-88
Identity = 155/212 (73.11%), Postives = 166/212 (78.30%), Query Frame = 0 
Query:    1 LQLIGHCLGYTPSYEKGLGLLSSCCRAKGMRRPCAAAVLELLVFREFRQTVDDXXXXXXXXXXXXXXXXXASRVEALDTAQIALESFYASFPVVPLLSVAHAKALQTSGAYEEAYDLCLMAQKVVDESVEKGDGMGPAHDPHVLWLQLGVSSFFLQRWSRALGVFTRIVEGV---CEKDQRGLTGFSAAYAAASMCGVQPINQAEVYKLLVV 209
            ++LI H +GYTPS++KGL LLS CC  KGMRRPCA AVLELLVFRE R +                     +R  ALD AQ ALESFYASFPVVPLLSVAHAKALQTSG YEEAYDLCLMAQKVVDESVEKGDGMGPAHDPHVLWLQL  SSFFLQRWSRAL VFTRIVEGV   CE D+RGLTGFSAAYAAAS CGVQP+ Q EV+KL+ V
Sbjct: 1638 VKLIEHVVGYTPSFDKGLSLLSGCCSTKGMRRPCAVAVLELLVFRERRVSTASIHRVGGGGAGAEMM----ARAVALDNAQGALESFYASFPVVPLLSVAHAKALQTSGEYEEAYDLCLMAQKVVDESVEKGDGMGPAHDPHVLWLQLAFSSFFLQRWSRALDVFTRIVEGVTQACENDKRGLTGFSAAYAAASTCGVQPVKQGEVHKLIDV 1845
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BLAST of mRNA_M-pyrifera_M_contig13460.5966.1 vs. uniprot
Match: A0A6H5KT18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT18_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 3.950e-74
Identity = 150/298 (50.34%), Postives = 166/298 (55.70%), Query Frame = 0 
Query:    1 LQLIGHCLGYTPSYEKGLGLLSSCCRAKGMRRPCAAAVLELLVFREFRQTV---------------------DDXXXXXXXXXXXXXXXXXAS-------------------------------------------------------------------RVEALDTAQIALESFYASFPVVPLLSVAHAKALQTSGAYEEAYDLCLMAQKVVDESVEKGDGMGPAHDPHVLWLQLGVSSFFLQRWSRALGVFTRIVEGV---CEKDQRGLTGFSAAYAAASMCGVQPINQAEVYKLL 207
            ++LI   +GY PS++KGL LLS CC  KGMRRPCA AVLELLVFRE ++                       DD                 A+                                                                   R  ALD AQ AL+SFYASFPVVPLLSVAHAKALQTSG YEEAY+LC++AQKVVDESVEKGDGMGPAHDPHVLWLQLG SSFFLQRWS AL  FTRIVEGV   CE D+RGLTGFSAAYAAASMCGVQP+ Q EV+KL+
Sbjct: 1932 VKLIEQMVGYAPSFDKGLSLLSGCCSTKGMRRPCAVAVLELLVFRELKRETKLMKAAKAVKPASSRVPQNGGDDSAVSGKRGFRRRIQFGQAAAVCGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGXXXXXXGAEMMARAVALDNAQGALDSFYASFPVVPLLSVAHAKALQTSGEYEEAYELCVVAQKVVDESVEKGDGMGPAHDPHVLWLQLGFSSFFLQRWSPALDAFTRIVEGVTQACENDKRGLTGFSAAYAAASMCGVQPVKQGEVHKLI 2229
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13460.5966.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMA1_ECTSI2.200e-8873.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KT18_9PHAE3.950e-7450.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 77..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13460contigM-pyrifera_M_contig13460:169..6266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13460.5966.1mRNA_M-pyrifera_M_contig13460.5966.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13460 169..6266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13460.5966.1 ID=prot_M-pyrifera_M_contig13460.5966.1|Name=mRNA_M-pyrifera_M_contig13460.5966.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=210bp
LQLIGHCLGYTPSYEKGLGLLSSCCRAKGMRRPCAAAVLELLVFREFRQT
VDDGGGSGGGGGGGEGGGGGASRVEALDTAQIALESFYASFPVVPLLSVA
HAKALQTSGAYEEAYDLCLMAQKVVDESVEKGDGMGPAHDPHVLWLQLGV
SSFFLQRWSRALGVFTRIVEGVCEKDQRGLTGFSAAYAAASMCGVQPINQ
AEVYKLLVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf