prot_M-pyrifera_M_contig13432.5959.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13432.5959.1
Unique Nameprot_M-pyrifera_M_contig13432.5959.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length263
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig13432.5959.1 vs. uniprot
Match: D8LKJ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKJ4_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 1.610e-60
Identity = 134/264 (50.76%), Postives = 157/264 (59.47%), Query Frame = 0 
Query:   19 EERVTVSAILRGINECLRRWKAARHEGQGILSRLSNAILLRTHIDSG-------RAPSSGGDGDKIGGTIGGSSTVWGVLANAGTTLSRVSIATEARVRQLHSELSALQDAMLAAAAGTRRHALEARRRIPTA-----GHPVRGGNVATDTAVTAVVAAGATVKPVNDEGADDPI-------AIGGGYGLVDVADAASEVAEMLLKEALVTATVAQGVGK--CQDDREALTAYAASWMMQPYVDERRVKELEVMVG-MARGGRS 260
            +ER   +A L  I+ CLRRWKAARHEGQ +L+ LSNA+LLRT++D G       RA + G               VWG LA AGTT+SRVS+ATE R R+LH +LSALQDAM+AAA   RRHA E RRR  +A      H   G +                                    A+GGGY LVDVAD  S+VAEML+KEALVTATV QGVG+   +DDREALT YAA+WMMQPYVD  R+KELEVMVG   RG R 
Sbjct:   18 KERQDAAATLDEIDGCLRRWKAARHEGQAVLTDLSNALLLRTYVDKGXXXXXXXRAATDG--------------AVWGALAGAGTTVSRVSVATEHRARRLHGDLSALQDAMVAAAGELRRHAREVRRRWVSARAGGEDHRTSGSSSGAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGGGYALVDVADTTSQVAEMLMKEALVTATVVQGVGQEHGRDDREALTVYAAAWMMQPYVDAGRLKELEVMVGGQGRGKRG 267
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13432.5959.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKJ4_ECTSI1.610e-6050.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13432contigM-pyrifera_M_contig13432:3553..4341 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13432.5959.1mRNA_M-pyrifera_M_contig13432.5959.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13432 3335..4881 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13432.5959.1 ID=prot_M-pyrifera_M_contig13432.5959.1|Name=mRNA_M-pyrifera_M_contig13432.5959.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=263bp
MSALDANLCGTRVATADSEERVTVSAILRGINECLRRWKAARHEGQGILS
RLSNAILLRTHIDSGRAPSSGGDGDKIGGTIGGSSTVWGVLANAGTTLSR
VSIATEARVRQLHSELSALQDAMLAAAAGTRRHALEARRRIPTAGHPVRG
GNVATDTAVTAVVAAGATVKPVNDEGADDPIAIGGGYGLVDVADAASEVA
EMLLKEALVTATVAQGVGKCQDDREALTAYAASWMMQPYVDERRVKELEV
MVGMARGGRSLP*
back to top