prot_M-pyrifera_M_contig13237.5889.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13237.5889.1
Unique Nameprot_M-pyrifera_M_contig13237.5889.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length482
Homology
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Match: D7FU99_ECTSI (Similar to DNA primase large subunit, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU99_ECTSI)

HSP 1 Score: 409 bits (1050), Expect = 1.320e-135
Identity = 275/505 (54.46%), Postives = 329/505 (65.15%), Query Frame = 0
Query:    1 METRVPPGLYLEPPSFDIDLDDFALLPRRRIEAIRLLREGQAT--EISNGSCEQQALTA-GKLLLLHGHGDRPSEAQHHRADLVSHFVLRLACCGGSEGRGGRGGEEAGGWKGRGQGXGG-EHHDRRWERREWFVRAETDLFEARLHWHLR---GGADRAGRNGQETGAKPEME---PASLNDRLQALRVVYKLGWLQPVADGLDDASA-----EPTSLRERADRGSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXADRGIERSKVKRP----RWN-SFPSPQEAVP----RSRLKKTGAYDGRAGIPPPPPPWVSGHPTPQASYGSSIGYVSCPFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKELLRKGMAIAERGLPGVERDERVKGVLAQVRRDIDRTLRGRHQEAGD-DPRASIAITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGMEVHELLGLWREEFPRGMPPEEYARKRNQLS 480
            MET  PPGLY++PP FDI+L++F  LP RR+EA+RLLREGQ T  ++   S  Q+ALTA  +LLLLHGHGDRPSEA++ RADL SHF+L+LACCG + G G + G EA     R    G  E  DRR  RREWFVRAE DLFEARLHWHL+   GG  + G  G+  G     +    AS+ DRL+ALR+ Y L WLQPV     D S      E       A  G           XXXXXXXXXXXXXXXXXX   D   E S+   P    R + S  + +  +P    R +L ++ A+ G                      GS IGY+SCPFEKVLP+VRSRRVLLRDGKALL+P Q+P AVVQHF+  LR+G+AIAERGLPGVE D RV  VL QVR  +D  + G  +   D D R+   ITR+ IDQ+AEKHFPLCMRRTL +LRR+HHLKY+AR+QL+SFL NAGMEV E+LGLWREEFP+GMP +EYARKRNQLS
Sbjct:    1 METCKPPGLYVDPPDFDIELEEFGTLPMRRLEAVRLLREGQTTPAQVPEASPAQKALTADARLLLLHGHGDRPSEAKNQRADLASHFILKLACCG-ATGGGVQPGTEA---SKRDDSSGRCEEVDRRSSRREWFVRAERDLFEARLHWHLQQNEGGGSKEGIAGRCNGGASSADLGARASIADRLEALRIFYNLEWLQPVGPAAPDCSRMEKQRESGHEGSHAREGVCTSSYGGKGCXXXXXXXXXXXXXXXXXXDGDDPFREHSRSYSPGACSRGDASHVTLERQLPPSSERKKLPESVAFKG----------------------GSDIGYLSCPFEKVLPLVRSRRVLLRDGKALLSPDQLPEAVVQHFEGRLREGLAIAERGLPGVEADVRVAEVLRQVRSAVDSLVSGGGRRGLDADNRSMAIITRKNIDQLAEKHFPLCMRRTLRILRREHHLKYQARLQLISFLRNAGMEVDEILGLWREEFPKGMPADEYARKRNQLS 479          
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Match: A0A662YH99_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YH99_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.120e-19
Identity = 63/184 (34.24%), Postives = 95/184 (51.63%), Query Frame = 0
Query:  299 QASYGSSIGYVSCPFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKELLRKGMAIAERGLPGVERDERVKGVLAQVRRDIDRTLRGRHQEAGDD-------PRASIAITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGMEVHELLGLWREEFPRGMPPEEYARK 475
            Q  +G S      PF +V  +VR RRV++R G  L+   ++  A + HFK  L++ +   +  +P +  +      L ++   +D  L   H   G         PR  +A     IDQVAEKHFPLCM++  H LR +HHLKY+ RVQ   FL   G  V+E L  +R EF + +PP ++ ++
Sbjct:   82 QEGHGRSRILYRVPFHEVSALVRQRRVVVRKGCCLIPSHEMDYAALHHFKRSLKQQLGDLQCAIPALGPE------LDRLTPVLDGFLAKAHSLVGSSGSRSRTRPRLEVA----GIDQVAEKHFPLCMKQLHHKLRENHHLKYDGRVQYRLFLKGVGFSVYETLQFFRTEFTKKIPPAKFEKE 255          
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Match: A0A8K1FD44_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FD44_PYTOL)

HSP 1 Score: 100 bits (249), Expect = 3.120e-19
Identity = 60/169 (35.50%), Postives = 86/169 (50.89%), Query Frame = 0
Query:  308 YVSCPFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKELLRKGMAIAERGLPGVERD-ERVKGVLAQVRRDIDRTLRGRHQEAGDDPRASIAITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGMEVHELLGLWREEFPRGMPPEEYARK 475
            Y   PF +   +V  R VLL +G A +    +    V HFK++LR  +    R LP  + D ER+   L ++  +       R       P+  + +T E IDQVAEKHFPLCM+      R +HHLKY+ RVQ   FL   G  VHE +  +R+EF + +P   + R+
Sbjct:  146 YFRVPFHEAARLVARRHVLLVNGFAWINENALKEIAVHHFKQILRAQLTALRRSLPAKKADMERLSPTLDKLLAESQSLHPARSILQ---PKNQLRVTPENIDQVAEKHFPLCMKHLHRKFRANHHLKYDGRVQYRMFLKGLGFSVHESMMFFRDEFTKVLPQVRFDRE 311          
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Match: E6RC40_CRYGW (DNA primase large subunit n=11 Tax=Cryptococcus TaxID=5206 RepID=E6RC40_CRYGW)

HSP 1 Score: 93.2 bits (230), Expect = 1.280e-16
Identity = 49/164 (29.88%), Postives = 86/164 (52.44%), Query Frame = 0
Query:  312 PFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKELLRKGMAIAERGLPGVERDERVKGVLAQVRRDIDRTLRGRHQEAGDDPRASIAITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGMEVHELLGLWREEFPRGMPPEEYARK 475
            P+  V  +V +RRVL++DG A +      + V+Q F + L K +    + LP ++ DER+  V+  +       +     +  ++    + +T +TID VA KHFP CMR     L++DHHLK+  R+QL  FL   G+ + + +  WR  +   M  +++ ++
Sbjct:  201 PWYTVPDLVGARRVLVKDGLAFVPQSLQLSLVLQAFADRLEKALEFTAKNLPRLDEDERLGPVIDHLASSFLSGIGASDYQPSNELGDGMTVTADTIDDVARKHFPPCMRHLYEKLKKDHHLKHWGRLQLTLFLKGLGLPLDQAILFWRRSYGASMTDDKFNKE 364          
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Match: A0A087SZT7_STEMI (DNA primase large subunit (Fragment) n=2 Tax=Stegodyphus TaxID=175340 RepID=A0A087SZT7_STEMI)

HSP 1 Score: 92.4 bits (228), Expect = 2.060e-16
Identity = 56/173 (32.37%), Postives = 93/173 (53.76%), Query Frame = 0
Query:  305 SIGYVSCPFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKELLRKGMAIAERGLPGVERDERVKGVLAQV-RRDIDRTLRGRHQE-AGDDPRASIAITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGMEVHELLGLWREEFPRGMPPEEYARK 475
            SI +   PF +VL ++++R+V L+ G A +    +   +   ++  L   +AI  R LP +E D R+  +L+ + +R I      R  + AGD       IT E ID +++  FPLCM+     LRR+HHLKY  R+Q   FL   G+ + + L  WR+EF + M  +++ ++
Sbjct:  186 SIDFYKVPFVEVLDLIKNRKVFLKKGFAYIPEDDMVITIASAYRAHLSHSLAITSRALPQLEEDTRLISMLSTLHQRYIGTDYSNRKVDYAGD-------ITPEFIDGLSKTSFPLCMQNLHETLRRNHHLKYNGRLQYGLFLKGIGLTLEDALRFWRQEFTKIMDNDKFDKQ 351          
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Match: A0A8H7GDN7_9AGAM (DNA primase large subunit n=1 Tax=Athelia sp. TMB TaxID=2748771 RepID=A0A8H7GDN7_9AGAM)

HSP 1 Score: 90.9 bits (224), Expect = 7.790e-16
Identity = 54/170 (31.76%), Postives = 89/170 (52.35%), Query Frame = 0
Query:  308 YVSCPFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKELLRKGMAIAERGLPGVERDERVKGVLAQVRRDIDRTLRGRHQEAGDDPRASIA--ITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGMEVHELLGLWREEFPRGMPPEEYARK 475
            +V   F +VL +V  RRV LR G A +   +  + V   F++ L K + +  + LP ++ D R+  +L+ + +     L G   E      A+ A  IT + ID++A+KHFPLCMR     LR   HLK+  R+Q   FL   G+ + E +  WR+ F R +  +++ ++
Sbjct:  199 FVKVKFTRVLDLVEKRRVFLRGGWAYVPERERSSIVFNEFEKYLMKALELTSKALPRLDEDSRLVPILSNLSQGF---LAGAPSEWAGASNATDAEGITADMIDELAQKHFPLCMRNLHRELRATDHLKHFGRLQYGLFLKVLGLPIEEAIAFWRKSFMRRITEDKFNKE 365          
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Match: A0A0C2XPM7_9AGAM (DNA primase large subunit n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C2XPM7_9AGAM)

HSP 1 Score: 90.5 bits (223), Expect = 9.400e-16
Identity = 53/168 (31.55%), Postives = 87/168 (51.79%), Query Frame = 0
Query:  308 YVSCPFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKELLRKGMAIAERGLPGVERDERVKGVLAQVRRDIDRTLRGRHQEAGDDPRASIAITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGMEVHELLGLWREEFPRGMPPEEYARK 475
            Y   P+ +V  +V  RR +LR G A +A  +  + V Q F+  L K + +  R LP ++ D R+  +L  + +     +   +  A   P    +IT + ID +A KHFPLCMR     LR D HLK++ R+Q   FL   G+ + E L  W++ F + +  E++ ++
Sbjct:  192 YYKVPWTRVPDLVEKRRAVLRAGTAYVAGREQFSIVFQQFQADLEKALEMTARALPRLDED-RLTPILDHLAQGFTLGISSEYSSA---PENGESITADMIDDLARKHFPLCMRMLHSNLREDSHLKHQGRLQYGLFLKIIGLSIEEALAFWKQAFSKKINDEKFRKE 355          
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Match: A0A8H7FL11_9AGAM (Uncharacterized protein n=1 Tax=Athelia sp. TMB TaxID=2748771 RepID=A0A8H7FL11_9AGAM)

HSP 1 Score: 90.9 bits (224), Expect = 1.130e-15
Identity = 54/170 (31.76%), Postives = 89/170 (52.35%), Query Frame = 0
Query:  308 YVSCPFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKELLRKGMAIAERGLPGVERDERVKGVLAQVRRDIDRTLRGRHQEAGDDPRASIA--ITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGMEVHELLGLWREEFPRGMPPEEYARK 475
            +V   F +VL +V  RRV LR G A +   +  + V   F++ L K + +  + LP ++ D R+  +L+ + +     L G   E      A+ A  IT + ID++A+KHFPLCMR     LR   HLK+  R+Q   FL   G+ + E +  WR+ F R +  +++ ++
Sbjct:  158 FVKVKFTRVLDLVEKRRVFLRGGWAYVPERERSSIVFNEFEKYLMKALELTSKALPRLDEDSRLVPILSNLSQGF---LAGAPSEWAGASNATDAEGITADMIDELAQKHFPLCMRNLHRELRATDHLKHFGRLQYGLFLKVLGLPIEEAIAFWRKSFMRRITEDKFNKE 324          
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Match: A0A1Q3FVI3_CULTA (DNA primase large subunit n=9 Tax=Culex TaxID=53527 RepID=A0A1Q3FVI3_CULTA)

HSP 1 Score: 90.1 bits (222), Expect = 1.580e-15
Identity = 54/162 (33.33%), Postives = 84/162 (51.85%), Query Frame = 0
Query:  305 SIGYVSCPFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKELLRKGMAIAERGLPGVERDERVKGVLAQVRRDIDRTLRGRHQEAGDDPRASIAITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGMEVHELLGLWREEFPRG 466
            ++ +   PF  VL +VR +R  L++G A ++ G   + +    +ELL +G+    R LP +E DER     A + + +  +  G+      +    I    E++DQ+A+K FPLCMR     LR  HH K+  R+Q   FL   G+ + + L  WREEF RG
Sbjct:  191 TMDFYKVPFTDVLDLVRGQRCYLKEGYAYVSAGDFVSVIGNKHQELLEEGLQAHLRLLPELENDER----FASLLKGLHTSYTGKDYTIAKNGEVPI----ESLDQLAKKSFPLCMRMCHDTLRSTHHHKHGGRMQYGLFLKGIGVTLEDSLRFWREEFTRG 344          
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Match: A0A2L2YIM2_PARTP (DNA primase large subunit n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YIM2_PARTP)

HSP 1 Score: 89.7 bits (221), Expect = 1.830e-15
Identity = 56/173 (32.37%), Postives = 91/173 (52.60%), Query Frame = 0
Query:  308 YVSCPFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKELLRKGMAIAERGLPGVERDERVKGVLAQVRRDIDRTLRGRHQEAGDD---PRASIA--ITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGMEVHELLGLWREEFPRGMPPEEYARK 475
            +   PF +VL ++++R+V L  G A +    +   VV  ++  L   +A+  R LP +E D R+  +L+        TL  R+   G D    +AS    IT + ID +++  FPLCMR     LR++HHLKY  R+Q   FL   G+ + + L  WREEF + M  +++ ++
Sbjct:  191 FYKVPFTEVLDLIKNRKVYLERGLAYIPEEDLVVTVVSAYRAHLSHALAVTSRALPQLEEDTRLISMLS--------TLHQRY--IGTDYSNKKASFTGEITPDQIDNLSKVAFPLCMRNLHETLRKNHHLKYNGRLQYGLFLKGIGLSLDDALRFWREEFTKVMDSDKFDKQ 353          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13237.5889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU99_ECTSI1.320e-13554.46Similar to DNA primase large subunit, partial n=2 ... [more]
A0A662YH99_9STRA1.120e-1934.24Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A8K1FD44_PYTOL3.120e-1935.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
E6RC40_CRYGW1.280e-1629.88DNA primase large subunit n=11 Tax=Cryptococcus Ta... [more]
A0A087SZT7_STEMI2.060e-1632.37DNA primase large subunit (Fragment) n=2 Tax=Stego... [more]
A0A8H7GDN7_9AGAM7.790e-1631.76DNA primase large subunit n=1 Tax=Athelia sp. TMB ... [more]
A0A0C2XPM7_9AGAM9.400e-1631.55DNA primase large subunit n=1 Tax=Serendipita verm... [more]
A0A8H7FL11_9AGAM1.130e-1531.76Uncharacterized protein n=1 Tax=Athelia sp. TMB Ta... [more]
A0A1Q3FVI3_CULTA1.580e-1533.33DNA primase large subunit n=9 Tax=Culex TaxID=5352... [more]
A0A2L2YIM2_PARTP1.830e-1532.37DNA primase large subunit n=2 Tax=Parasteatoda tep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007238DNA primase large subunit, eukaryotic/archaealPFAMPF04104DNA_primase_lrgcoord: 309..472
e-value: 1.6E-27
score: 96.6
IPR007238DNA primase large subunit, eukaryotic/archaealPANTHERPTHR10537DNA PRIMASE LARGE SUBUNITcoord: 304..475
coord: 9..143
NoneNo IPR availableGENE3D1.20.930.80coord: 294..378
e-value: 2.2E-12
score: 48.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13237contigM-pyrifera_M_contig13237:2745..8345 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13237.5889.1mRNA_M-pyrifera_M_contig13237.5889.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13237 2745..8345 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13237.5889.1 ID=prot_M-pyrifera_M_contig13237.5889.1|Name=mRNA_M-pyrifera_M_contig13237.5889.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=482bp
METRVPPGLYLEPPSFDIDLDDFALLPRRRIEAIRLLREGQATEISNGSC
EQQALTAGKLLLLHGHGDRPSEAQHHRADLVSHFVLRLACCGGSEGRGGR
GGEEAGGWKGRGQGGGGEHHDRRWERREWFVRAETDLFEARLHWHLRGGA
DRAGRNGQETGAKPEMEPASLNDRLQALRVVYKLGWLQPVADGLDDASAE
PTSLRERADRGSTDRESAGRGRADRENAGRESAKHEIADRGSADRGIERS
KVKRPRWNSFPSPQEAVPRSRLKKTGAYDGRAGIPPPPPPWVSGHPTPQA
SYGSSIGYVSCPFEKVLPMVRSRRVLLRDGKALLAPGQVPAAVVQHFKEL
LRKGMAIAERGLPGVERDERVKGVLAQVRRDIDRTLRGRHQEAGDDPRAS
IAITRETIDQVAEKHFPLCMRRTLHVLRRDHHLKYEARVQLVSFLGNAGM
EVHELLGLWREEFPRGMPPEEYARKRNQLSNS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007238DNA_primase_lsu_euk/arc