prot_M-pyrifera_M_contig1306.5830.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1306.5830.1
Unique Nameprot_M-pyrifera_M_contig1306.5830.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length40
Homology
BLAST of mRNA_M-pyrifera_M_contig1306.5830.1 vs. uniprot
Match: D8LJR2_ECTSI (Coatomer protein complex, gamma sub-unit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR2_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 1.130e-16
Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 0
Query:    1 MSIAPISQFFILSPRGDTIISKDYRGDAVAGTTDTFFRK 39
            MSIAP+SQFFILSPRGDTIISKDYRGDAVAGTTDTFFRK
Sbjct:    1 MSIAPVSQFFILSPRGDTIISKDYRGDAVAGTTDTFFRK 39          
BLAST of mRNA_M-pyrifera_M_contig1306.5830.1 vs. uniprot
Match: A0A835YW81_9STRA (Coatomer protein complex, gamma sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW81_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 4.060e-13
Identity = 34/39 (87.18%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    1 MSIAPISQFFILSPRGDTIISKDYRGDAVAGTTDTFFRK 39
            MSIAPIS FFILSPRGDTIISKDYRGD V G TD FFRK
Sbjct:    1 MSIAPISHFFILSPRGDTIISKDYRGDVVPGGTDIFFRK 39          
BLAST of mRNA_M-pyrifera_M_contig1306.5830.1 vs. uniprot
Match: A0A7S1C3I7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3I7_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 2.140e-10
Identity = 29/37 (78.38%), Postives = 32/37 (86.49%), Query Frame = 0
Query:    3 IAPISQFFILSPRGDTIISKDYRGDAVAGTTDTFFRK 39
            +A I QFFILSPRGDTIISK YRGD VAGT++ FFRK
Sbjct:   41 VAMIGQFFILSPRGDTIISKQYRGDVVAGTSEIFFRK 77          
BLAST of mRNA_M-pyrifera_M_contig1306.5830.1 vs. uniprot
Match: A0A5A8EE88_CAFRO (MHD domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EE88_CAFRO)

HSP 1 Score: 60.5 bits (145), Expect = 1.390e-9
Identity = 27/35 (77.14%), Postives = 32/35 (91.43%), Query Frame = 0
Query:    6 ISQFFILSPRGDTIISKDYRGDAVAGTTDTFFRKA 40
            ISQ F+LSPRGDTIIS++YRGDAV GT++ FFRKA
Sbjct:    2 ISQLFVLSPRGDTIISREYRGDAVKGTSEIFFRKA 36          
BLAST of mRNA_M-pyrifera_M_contig1306.5830.1 vs. uniprot
Match: A0A7S3MBD4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MBD4_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 6.110e-9
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    6 ISQFFILSPRGDTIISKDYRGDAVAGTTDTFFRK 39
            I QFFILSPRGDTII+KD+RGDA+ G  D FFRK
Sbjct:   20 IGQFFILSPRGDTIINKDFRGDAIPGQQDLFFRK 53          
BLAST of mRNA_M-pyrifera_M_contig1306.5830.1 vs. uniprot
Match: A0A7J6PAW8_PEROL (AP-4 complex subunit mu-1 n=5 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PAW8_PEROL)

HSP 1 Score: 58.2 bits (139), Expect = 9.040e-9
Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 0
Query:    6 ISQFFILSPRGDTIISKDYRGDAVAGTTDTFFRKA 40
            +SQF+ILSPRGDTII++D+RGD V GT + FFRKA
Sbjct:   10 VSQFYILSPRGDTIITRDFRGDIVKGTAEIFFRKA 44          
BLAST of mRNA_M-pyrifera_M_contig1306.5830.1 vs. uniprot
Match: C5LK26_PERM5 (Uncharacterized protein n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5LK26_PERM5)

HSP 1 Score: 58.2 bits (139), Expect = 9.060e-9
Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 0
Query:    6 ISQFFILSPRGDTIISKDYRGDAVAGTTDTFFRKA 40
            +SQF+ILSPRGDTII++D+RGD V GT + FFRKA
Sbjct:   10 VSQFYILSPRGDTIITRDFRGDIVKGTAEIFFRKA 44          
BLAST of mRNA_M-pyrifera_M_contig1306.5830.1 vs. uniprot
Match: A0A7J6RI43_PEROL (AP-4 complex subunit mu-1 n=3 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6RI43_PEROL)

HSP 1 Score: 58.2 bits (139), Expect = 9.090e-9
Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 0
Query:    6 ISQFFILSPRGDTIISKDYRGDAVAGTTDTFFRKA 40
            +SQF+ILSPRGDTII++D+RGD V GT + FFRKA
Sbjct:   10 VSQFYILSPRGDTIITRDFRGDIVKGTAEIFFRKA 44          
BLAST of mRNA_M-pyrifera_M_contig1306.5830.1 vs. uniprot
Match: A0A7J6MGK3_PEROL (AP-4 complex subunit mu-1 n=3 Tax=Perkinsus TaxID=28000 RepID=A0A7J6MGK3_PEROL)

HSP 1 Score: 58.2 bits (139), Expect = 9.090e-9
Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 0
Query:    6 ISQFFILSPRGDTIISKDYRGDAVAGTTDTFFRKA 40
            +SQF+ILSPRGDTII++D+RGD V GT + FFRKA
Sbjct:   10 VSQFYILSPRGDTIITRDFRGDIVKGTAEIFFRKA 44          
BLAST of mRNA_M-pyrifera_M_contig1306.5830.1 vs. uniprot
Match: A0A0L0DR67_THETB (Adaptor complexes medium subunit family protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DR67_THETB)

HSP 1 Score: 57.4 bits (137), Expect = 1.700e-8
Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    3 IAPISQFFILSPRGDTIISKDYRGDAVAGTTDTFFRK 39
            +A  SQFF+LS RGDTI+SKDYRGD V GT D F+RK
Sbjct:    1 MAAFSQFFVLSGRGDTIVSKDYRGDVVKGTPDIFWRK 37          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1306.5830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJR2_ECTSI1.130e-1697.44Coatomer protein complex, gamma sub-unit n=1 Tax=E... [more]
A0A835YW81_9STRA4.060e-1387.18Coatomer protein complex, gamma sub-unit n=1 Tax=T... [more]
A0A7S1C3I7_9STRA2.140e-1078.38Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A5A8EE88_CAFRO1.390e-977.14MHD domain-containing protein n=1 Tax=Cafeteria ro... [more]
A0A7S3MBD4_9STRA6.110e-976.47Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7J6PAW8_PEROL9.040e-971.43AP-4 complex subunit mu-1 n=5 Tax=Perkinsus olseni... [more]
C5LK26_PERM59.060e-971.43Uncharacterized protein n=1 Tax=Perkinsus marinus ... [more]
A0A7J6RI43_PEROL9.090e-971.43AP-4 complex subunit mu-1 n=3 Tax=Perkinsus olseni... [more]
A0A7J6MGK3_PEROL9.090e-971.43AP-4 complex subunit mu-1 n=3 Tax=Perkinsus TaxID=... [more]
A0A0L0DR67_THETB1.700e-870.27Adaptor complexes medium subunit family protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.60coord: 5..40
e-value: 7.0E-7
score: 31.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1306contigM-pyrifera_M_contig1306:7391..7510 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1306.5830.1mRNA_M-pyrifera_M_contig1306.5830.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1306 7391..7510 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1306.5830.1 ID=prot_M-pyrifera_M_contig1306.5830.1|Name=mRNA_M-pyrifera_M_contig1306.5830.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=40bp
MSIAPISQFFILSPRGDTIISKDYRGDAVAGTTDTFFRKA
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