prot_M-pyrifera_M_contig13043.5825.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig13043.5825.1
Unique Name	prot_M-pyrifera_M_contig13043.5825.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	149

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig13043.5825.1 vs. uniprot
Match: D7FQK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQK9_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 7.590e-70
Identity = 104/149 (69.80%), Postives = 122/149 (81.88%), Query Frame = 0

Query:    1 RILSGSFIVLLLPLFWNAAADGHPVITPITSLGNGSSWNFGWARPIAHFALAFIGSFLDFHPAARLSCLVGMAQAVGFDTLSSYDLGTQIECVASGNCAMPENYSLWGLRLLNARDLASIVLATWALLLIVYLTAIIGVCRTRYRFRQL 149
            R LSG+FI+LL PLFW AA++  PVITPITS GNGSSWN+GW RP+ HF L F+G F+D H AARLSCLVGM QA+  DTLSSY LGTQI+CV SG CA+PE+ +L GLRLL +RDLAS+ LATWALLL  YL+ +IG+CRTRY FRQL
Sbjct:   29 RCLSGAFILLLFPLFWVAASEARPVITPITSFGNGSSWNYGWGRPVLHFGLVFVGMFVDTHQAARLSCLVGMMQAIVLDTLSSYALGTQIDCVQSGRCAVPEHTTLSGLRLLQSRDLASVALATWALLLAYYLSLVIGMCRTRYNFRQL 177

[Close]

BLAST of mRNA_M-pyrifera_M_contig13043.5825.1 vs. uniprot
Match: A0A835Z6W0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6W0_9STRA)

HSP 1 Score: 122 bits (307), Expect = 4.920e-32
Identity = 66/146 (45.21%), Postives = 93/146 (63.70%), Query Frame = 0

Query:    6 SFIVLLLPLFWNAAA-DGHPVITPITSLGNGS-SWNFGWARPIAHFALAFIGSFLDFHPAARLSCLVGMAQAVGFDTLSSYDLGTQIECVASGNCAMPENYSLWGLRLLNARDLASIVLATWALLLIVYLTAIIGVCRTRYRFRQL 149
            ++I LL PL   AA  D  P+  PIT+  +GS SWN+GW RP+   A AF+G F+D+HP  R  C+ G++  +  DT+S+ DL TQ  CVA G C M + Y+   L+ L  R++A+  + T AL  I+YL+A+ GV RTRY +RQL
Sbjct:   55 AYIALLAPLLTLAARWDAMPIPRPITAYRDGSGSWNYGWGRPMTGMASAFMGMFMDYHPGVRCICMGGLSVGLVLDTISAIDLDTQRYCVAEGRCPMAKGYTAQLLQWLYFREMAACAIGTCALAHILYLSAVTGVFRTRYTYRQL 200

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig13043.5825.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig13043.5825.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FQK9_ECTSI	7.590e-70	69.80	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835Z6W0_9STRA	4.920e-32	45.21	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 21..116
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 141..149
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 117..140
None	No IPR available	SIGNALP_EUK	SignalP-TM	SignalP-TM	coord: 1..22 score: 0.745
None	No IPR available	TMHMM	TMhelix		coord: 117..139

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig13043	contig	M-pyrifera_M_contig13043:4895..5341 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig13043.5825.1	mRNA_M-pyrifera_M_contig13043.5825.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig13043 4895..5341 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig13043.5825.1 ID=prot_M-pyrifera_M_contig13043.5825.1|Name=mRNA_M-pyrifera_M_contig13043.5825.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp
RILSGSFIVLLLPLFWNAAADGHPVITPITSLGNGSSWNFGWARPIAHFA
LAFIGSFLDFHPAARLSCLVGMAQAVGFDTLSSYDLGTQIECVASGNCAM
PENYSLWGLRLLNARDLASIVLATWALLLIVYLTAIIGVCRTRYRFRQL