prot_M-pyrifera_M_contig12983.5808.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12983.5808.1
Unique Nameprot_M-pyrifera_M_contig12983.5808.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length127
Homology
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BLAST of mRNA_M-pyrifera_M_contig12983.5808.1 vs. uniprot
Match: D7G8W0_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W0_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 8.390e-39
Identity = 69/122 (56.56%), Postives = 87/122 (71.31%), Query Frame = 0 
Query:    1 QNLAVFGTCNPYVLVKLKSSLDSLTTAVKDCDANPSWQETFTFRNASSTDGLQICLMEKEGPREGVVSVGNFIPSSAWGYPGIGGADHVTEIKMP----GNGKPETEIMGTIILKLQYHVEV 118
            QNL  FGTCNPYVL+K+ SS ++ TT V++ DANPSW ETF FRN +STD LQI LMEKEG REGVVSV   + ++ WG+PG+GG + V E+ MP      G P    MGT++LKLQY  ++
Sbjct:   21 QNLKAFGTCNPYVLLKMTSSPETKTTGVRESDANPSWHETFIFRNVASTDALQISLMEKEGSREGVVSVRGGVRATEWGFPGVGGGERVLEVTMPCTTDTTGVPN---MGTVVLKLQYRAQL 139
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12983.5808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8W0_ECTSI8.390e-3956.56C2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 1..115
e-value: 1.2E-8
score: 37.0
IPR000008C2 domainPFAMPF00168C2coord: 5..61
e-value: 4.1E-7
score: 30.2
IPR000008C2 domainPROSITEPS50004C2coord: 1..73
score: 8.769
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 7..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12983contigM-pyrifera_M_contig12983:162..4077 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12983.5808.1mRNA_M-pyrifera_M_contig12983.5808.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12983 162..4077 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12983.5808.1 ID=prot_M-pyrifera_M_contig12983.5808.1|Name=mRNA_M-pyrifera_M_contig12983.5808.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp
QNLAVFGTCNPYVLVKLKSSLDSLTTAVKDCDANPSWQETFTFRNASSTD
GLQICLMEKEGPREGVVSVGNFIPSSAWGYPGIGGADHVTEIKMPGNGKP
ETEIMGTIILKLQYHVEVCESRIPLSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR000008C2_dom