prot_M-pyrifera_M_contig12949.5794.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12949.5794.1
Unique Nameprot_M-pyrifera_M_contig12949.5794.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length394
Homology
BLAST of mRNA_M-pyrifera_M_contig12949.5794.1 vs. uniprot
Match: A0A6H5KLY0_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLY0_9PHAE)

HSP 1 Score: 481 bits (1237), Expect = 6.890e-157
Identity = 324/447 (72.48%), Postives = 344/447 (76.96%), Query Frame = 0
Query:    1 KVTLLAVTLVSKEIRDWMDAHARGKDAERAEDAHRSHALISALLNELLVNASLSSVPLVLAAGCKLVGSFATLVGGGRYGRPRFGAIGGAPGGNXXXXXXXXXXXXXXXXXXX------------------------------------GGAE---LLPRALSYLAAGLQQEESRDRAAMSVRTVAASCERAIVANPAALEALLQTLDVGTRAGADIEERLTLVEASVRVLPAVDPAAGSAMLMGLLSPLMHVLAQGLQSTSPDETAISEALQLLAQAVRFLDVRDVPPXXXXXXXXXXXXXXXXXXXPVAAGGAVETR---------------SGQPPQISTELVRALWPMLEAVPGRLGGSPEVVRQLFLLLGKMLTSLRMVLAQQVHIPTLLKMIMDCYDERQYSCCLDIMTTAVEVYGSADEAAEHFRSLLGRASARTFATVQ 393
            +VTLLAVTLVSKEIRDWMDAHAR KD ERAEDA R+HAL+SAL+NELLVNASLSSVPLVLAAGCKLVGSFATLVGGGRYGRPRFG++GG     XXXXXXXXX  XXXXXXXX                                    GG+    LLPRAL YL  GLQQ E+RDRAA+SVRTVAASCERAIV NPAALEALLQTL+V TRAGA IEERLTL+EASVRVLPAVDPA GS +LMGLLSPLMH LAQGLQST+PDE AISEALQ LAQAVRFLDVRD P XXXXXXXXXXXXXXXXXXX                          + Q   ISTELVR LWPMLEAVPGR+GGSPEV+RQLFLL+GK+LTSLRMVLA+QVHIPTLLKMIMD YDE QY CCLDIMTTAVEVYGS DEA EHFR+LLGRAS RTF  VQ
Sbjct:  519 EVTLLAVTLVSKEIRDWMDAHARSKDEERAEDAGRTHALVSALINELLVNASLSSVPLVLAAGCKLVGSFATLVGGGRYGRPRFGSVGGXXXXXXXXXXXXXXATXXXXXXXXXXXXXXXXXXXXXXXXXPPLSAEEETERGWWRRGRLGGSSDPSLLPRALGYLTVGLQQAEARDRAAISVRTVAASCERAIVNNPAALEALLQTLEVATRAGAGIEERLTLIEASVRVLPAVDPARGSVLLMGLLSPLMHALAQGLQSTTPDEPAISEALQQLAQAVRFLDVRDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAQSQHISTELVRTLWPMLEAVPGRMGGSPEVMRQLFLLVGKLLTSLRMVLARQVHIPTLLKMIMDSYDEHQYPCCLDIMTTAVEVYGSTDEAMEHFRALLGRASTRTFTVVQ 965          
BLAST of mRNA_M-pyrifera_M_contig12949.5794.1 vs. uniprot
Match: A0A835YMS8_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMS8_9STRA)

HSP 1 Score: 172 bits (435), Expect = 2.210e-43
Identity = 151/391 (38.62%), Postives = 207/391 (52.94%), Query Frame = 0
Query:    4 LLAVTLVSKEIRDWMDAHARGKDAERAEDAHRSHALISALLNELLVNASLSSVPLVLAAGCKLVGSFATLVGGGRYGRPRFGAIGGAPGGNXXXXXXXXXXXXXXXXXXXGGAELLPRALSYLAAGLQQEESRDRAAMSVRTVAASCERAIVANPAALEALLQTLDVGTRAGADIEERLTLVEASVRVLPAVDPAAGSAMLMGLLSPLMHVLAQGLQSTSPDETAISEALQLLAQAVRFLDVRDVPPXXXXXXXXXXXXXXXXXXXPVAAGGAVETRSGQPPQISTELVRALWPMLEAVPGRLGGSPEVVRQLFLLLGKMLTSLRMVLAQQVHIPTLLKMIMDCYDERQYSCCLDIMTTAVEVY-GSADEAAEHFRSLLGRASARTFATVQ 393
            LLAVT V+KE+R W+ +    K AE + DA RS  L+  L+ EL++N+++SS PLVLAAGC+LVG+F++L+       P+                                  LL  AL YL  GL+   SR  AA ++R   A+CERA+ A+ AA+E LL  L       A +E+++ + EA  RVL A++PA  S ++    +PL+                + +  ++L Q VRFLD    PP XXXXXXXXXXXX           GA             EL+++L P+++AV GR  GS EV+ QLFLL+GK L+SLR + A Q HIP  L +++D      Y CCL+ M TAVEVY G + +  EHF  LL R  A TF   Q
Sbjct:  547 LLAVTHVAKEVRSWISSPE--KTAEGSADAQRSRDLLQGLIQELVLNSAISSHPLVLAAGCRLVGAFSSLLTHRASTAPQ-------------------------------DNPLLVPALRYLCTGLRDATSRAAAAAALRGACAACERAVAASDAAVEVLLPQLQA---VNAPVEQQVEVAEAGARVLAALEPARASQLIALFAAPLLQ--------------DVKQVTEVLTQIVRFLDA---PPAXXXXXXXXXXXX----------SGA---------HACAELLQSLRPLVDAVAGRCQGSEEVMAQLFLLVGKALSSLRSLPALQAHIPAFLNIMLD-----HYPCCLECMGTAVEVYSGESAQVVEHFGQLLARVCAETFTYFQ 860          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12949.5794.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLY0_9PHAE6.890e-15772.48Importin N-terminal domain-containing protein n=2 ... [more]
A0A835YMS8_9STRA2.210e-4338.62Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 113..394
e-value: 2.0E-25
score: 91.0
NoneNo IPR availablePANTHERPTHR12363TRANSPORTIN 3 AND IMPORTIN 13coord: 117..392
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 44..368

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12949contigM-pyrifera_M_contig12949:100..8543 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12949.5794.1mRNA_M-pyrifera_M_contig12949.5794.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12949 100..8543 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12949.5794.1 ID=prot_M-pyrifera_M_contig12949.5794.1|Name=mRNA_M-pyrifera_M_contig12949.5794.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=394bp
KVTLLAVTLVSKEIRDWMDAHARGKDAERAEDAHRSHALISALLNELLVN
ASLSSVPLVLAAGCKLVGSFATLVGGGRYGRPRFGAIGGAPGGNGGAEGD
AGGGGEGAGMGGSGGAELLPRALSYLAAGLQQEESRDRAAMSVRTVAASC
ERAIVANPAALEALLQTLDVGTRAGADIEERLTLVEASVRVLPAVDPAAG
SAMLMGLLSPLMHVLAQGLQSTSPDETAISEALQLLAQAVRFLDVRDVPP
APPPVSPAGGSGSPRGPASPVAAGGAVETRSGQPPQISTELVRALWPMLE
AVPGRLGGSPEVVRQLFLLLGKMLTSLRMVLAQQVHIPTLLKMIMDCYDE
RQYSCCLDIMTTAVEVYGSADEAAEHFRSLLGRASARTFATVQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold