prot_M-pyrifera_M_contig12909.5780.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12909.5780.1
Unique Nameprot_M-pyrifera_M_contig12909.5780.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length93
Homology
BLAST of mRNA_M-pyrifera_M_contig12909.5780.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 1.890e-50
Identity = 77/92 (83.70%), Postives = 87/92 (94.57%), Query Frame = 0
Query:    1 LALVAFVEGQTILNAWGTVSPVTGVGNLKEEYYPGDLGFDPLGLAPKDGDDFRLIQSQELDLGRYAMIGVLGMIAQECVDGKGIVEHVLTQI 92
            L ++AF+EGQTI +AWGTVSPVTGVGNLK EYYPGDLGFDPLGLAPKDG+DFRLIQSQELDLGRYAMIGVLGMI QE VDGKGI+EH++++I
Sbjct:  140 LGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGILEHIVSRI 231          
BLAST of mRNA_M-pyrifera_M_contig12909.5780.1 vs. uniprot
Match: A0A6H5JVV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVV6_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 1.220e-21
Identity = 44/81 (54.32%), Postives = 58/81 (71.60%), Query Frame = 0
Query:    4 VAFVEGQTILNAWGTVSPVTGVGNLKEEYYPGDLGFDPLGLAPKDGDDFRLIQSQELDLGRYAMIGVLGMIAQECVDGKGI 84
            +AF+E  TI+ A+ T S VTG G LKE+Y PGDLGFDPL L P D     +++++EL+ GR AMIG+ GM+AQE V+  GI
Sbjct:    1 MAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPAGI 81          
BLAST of mRNA_M-pyrifera_M_contig12909.5780.1 vs. uniprot
Match: A0A6H5JG14_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG14_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 1.730e-21
Identity = 44/81 (54.32%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    4 VAFVEGQTILNAWGTVSPVTGVGNLKEEYYPGDLGFDPLGLAPKDGDDFRLIQSQELDLGRYAMIGVLGMIAQECVDGKGI 84
            +AF+E  TI  A+   SPVTG G L+EEY PGDLGFDPL L PKD      +Q++EL+ GR AMIG+ GM+ QE V+   I
Sbjct:    1 MAFIEYNTITKAYAEPSPVTGEGGLREEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADI 81          
BLAST of mRNA_M-pyrifera_M_contig12909.5780.1 vs. uniprot
Match: A0A6S9I6N1_HETAK (Hypothetical protein n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9I6N1_HETAK)

HSP 1 Score: 90.5 bits (223), Expect = 1.420e-20
Identity = 43/82 (52.44%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    1 LALVAFVEGQTILNAWGTVSPVTG--VGNLKEEYYPGDLGFDPLGLAPKDGDDFRLIQSQELDLGRYAMIGVLGMIAQECVD 80
            L  +A +EGQTIL AW +V   +G  V +LK +Y PGDLGFDPLGL P D ++ ++++++EL+ GR AMIGV GM+ QE V 
Sbjct:  119 LFFIALIEGQTILTAWDSVKEASGKAVSDLKADYIPGDLGFDPLGLKPADEEELKVMKTKELNNGRLAMIGVAGMLVQELVS 200          
BLAST of mRNA_M-pyrifera_M_contig12909.5780.1 vs. uniprot
Match: A0A7S2EH28_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EH28_TRICV)

HSP 1 Score: 90.1 bits (222), Expect = 2.140e-20
Identity = 40/68 (58.82%), Postives = 52/68 (76.47%), Query Frame = 0
Query:   20 SPVTGVGNLKEEYYPGDLGFDPLGLAPKDGDDFRLIQSQELDLGRYAMIGVLGMIAQECVDGKGIVEH 87
            +PV   G LK +Y PGDLGFDPLGL P+D ++FR++Q++EL  GR AM+   G +AQE VDGKGI+EH
Sbjct:  140 TPVDQPGLLKADYIPGDLGFDPLGLKPEDPEEFRIMQTKELQNGRLAMLAAAGFLAQEAVDGKGIIEH 207          
BLAST of mRNA_M-pyrifera_M_contig12909.5780.1 vs. uniprot
Match: A0A6U2BSD9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2BSD9_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 4.430e-20
Identity = 40/68 (58.82%), Postives = 52/68 (76.47%), Query Frame = 0
Query:   20 SPVTGVGNLKEEYYPGDLGFDPLGLAPKDGDDFRLIQSQELDLGRYAMIGVLGMIAQECVDGKGIVEH 87
            +PV   G L+ +Y PGDLGFDPLGL P+D ++FR++Q++EL  GR AMI   G +AQE VDGKGI+EH
Sbjct:  141 TPVDQPGLLRADYTPGDLGFDPLGLKPEDPEEFRIMQTKELQNGRLAMIAAAGFLAQEAVDGKGIIEH 208          
BLAST of mRNA_M-pyrifera_M_contig12909.5780.1 vs. uniprot
Match: A0A6H5JVY1_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVY1_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 5.170e-20
Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 0
Query:    4 VAFVEGQTILNAWGTVSPVTGVGNLKEEYYPGDLGFDPLGLAPKDGDDFRLIQSQELDLGRYAMIGVLGMIAQECVDGKGI 84
            +AF+E  TI+ A+ T S VTG G LKE+Y PGDLGFDPL L P D     +++++EL+ GR AMIG+ GM+AQE V+   I
Sbjct:   49 MAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADI 129          
BLAST of mRNA_M-pyrifera_M_contig12909.5780.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 7.070e-20
Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 0
Query:    4 VAFVEGQTILNAWGTVSPVTGVGNLKEEYYPGDLGFDPLGLAPKDGDDFRLIQSQELDLGRYAMIGVLGMIAQECVDGKGI 84
            +AF+E  TI  A+   SPVTG G L++EY PGDLGFDP  + PKD      +Q++EL+ GR AMIG++GM+ QE V+G+ I
Sbjct:  136 MAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDI 216          
BLAST of mRNA_M-pyrifera_M_contig12909.5780.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 7.970e-20
Identity = 43/84 (51.19%), Postives = 60/84 (71.43%), Query Frame = 0
Query:    4 VAFVEGQTILNAWGTVSPVTGVGNLKEEYYPGDLGFDPLGLAPKDGDDFRLIQSQELDLGRYAMIGVLGMIAQECVDGKGIVEH 87
            +AF+E  TI+ A+ T S VTG G LKE+Y PGDLGFDPL L P       +++++EL+ GR AMIG+ GM+AQE V+G+ I+ +
Sbjct:  138 MAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDILPN 221          
BLAST of mRNA_M-pyrifera_M_contig12909.5780.1 vs. uniprot
Match: A0A7S3VGX6_DUNTE (Chlorophyll a-b binding protein, chloroplastic n=3 Tax=Eukaryota TaxID=2759 RepID=A0A7S3VGX6_DUNTE)

HSP 1 Score: 85.5 bits (210), Expect = 8.860e-20
Identity = 38/68 (55.88%), Postives = 51/68 (75.00%), Query Frame = 0
Query:   20 SPVTGVGNLKEEYYPGDLGFDPLGLAPKDGDDFRLIQSQELDLGRYAMIGVLGMIAQECVDGKGIVEH 87
            +PV   G L+ +Y PGDLGFDPLGL P+D ++F ++Q++EL  GR AM+   G +AQE VDGKGI+EH
Sbjct:   29 APVDQPGLLRADYTPGDLGFDPLGLKPEDPEEFVIMQTKELQHGRLAMLAAAGFLAQEAVDGKGIIEH 96          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12909.5780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQG7_ECTSI1.890e-5083.70Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A6H5JVV6_9PHAE1.220e-2154.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG14_9PHAE1.730e-2154.32LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6S9I6N1_HETAK1.420e-2052.44Hypothetical protein n=6 Tax=Heterosigma akashiwo ... [more]
A0A7S2EH28_TRICV2.140e-2058.82Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A6U2BSD9_9STRA4.430e-2058.82Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A6H5JVY1_9PHAE5.170e-2053.09LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G7S0_ECTSI7.070e-2051.85Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI7.970e-2051.19Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A7S3VGX6_DUNTE8.860e-2055.88Chlorophyll a-b binding protein, chloroplastic n=3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10coord: 1..92
e-value: 4.6E-18
score: 67.7
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 3..77
e-value: 3.0E-14
score: 53.9
IPR001344Chlorophyll A-B binding protein, plantPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 2..90
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 2..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12909contigM-pyrifera_M_contig12909:2272..2550 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12909.5780.1mRNA_M-pyrifera_M_contig12909.5780.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12909 2272..2550 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12909.5780.1 ID=prot_M-pyrifera_M_contig12909.5780.1|Name=mRNA_M-pyrifera_M_contig12909.5780.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=93bp
LALVAFVEGQTILNAWGTVSPVTGVGNLKEEYYPGDLGFDPLGLAPKDGD
DFRLIQSQELDLGRYAMIGVLGMIAQECVDGKGIVEHVLTQI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023329Chlorophyll_a/b-bd_dom_sf
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln