prot_M-pyrifera_M_contig12879.5770.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12879.5770.1
Unique Nameprot_M-pyrifera_M_contig12879.5770.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length267
Homology
BLAST of mRNA_M-pyrifera_M_contig12879.5770.1 vs. uniprot
Match: D7FNK0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNK0_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 1.020e-65
Identity = 123/214 (57.48%), Postives = 146/214 (68.22%), Query Frame = 0
Query:   56 FEELSESSDPSLLPDLYTVNTLMAVFSNAGMLPRALGLLEEAKTRGLSPDVITYRRANVFLLTLVRACERAVPSQPGVALQLVSDMEMAGVRPNNTTFVSVALSLGRAGQPLECLRVLRDMTERGTPPDAVCCQTVLRVLDRWDQAEEAFGLFEEMRG--RRFALAPGVAEEAYCCGIRALEKLGRWPAAVALLEEWRALDAYDEDKDAVVGDW 267
            F+EL  S D SL            VFS+AGMLPRAL LLEEAK + L       R       TL+RACER++PSQP VAL+LVSDME  GVRPNNTT+V VA+SLGR+ +PLECL +LR M  +GTPPDA+C   VL+VLDRWD AEEA  LFEEM     + AL P +AEE YCCGIRALE+LG+W  AVALL++WR   +YD D D +   W
Sbjct:  464 FDELVASGDESLRXXXXXXXXXXXVFSDAGMLPRALELLEEAKAKRL-------RXXXXXXXTLIRACERSMPSQPDVALKLVSDMEAEGVRPNNTTYVGVAISLGRSARPLECLDLLRSMHGKGTPPDAICYLAVLKVLDRWDLAEEASLLFEEMVETIEQIALMPAIAEETYCCGIRALERLGKWSEAVALLDQWRQKGSYDADNDRMYDQW 670          
BLAST of mRNA_M-pyrifera_M_contig12879.5770.1 vs. uniprot
Match: A0A2P6PG98_ROSCH (Putative tetratricopeptide-like helical domain, DYW domain-containing protein n=4 Tax=Rosoideae TaxID=171638 RepID=A0A2P6PG98_ROSCH)

HSP 1 Score: 62.0 bits (149), Expect = 3.030e-7
Identity = 56/200 (28.00%), Postives = 91/200 (45.50%), Query Frame = 0
Query:   16 ALQLLELMPSEGVSPDLMTYNTALDACVKKGGQWEMAMSLFEEL-SESSDPSLLPDLYTVNTLMAVFSNAGMLPRALGLLEEAKTRGLSPDVITYRRANVFLLTLVRACERAVPSQPGVALQLVSDMEMAGVRPNNTTFVSVALSLGRAGQPLECLRVLRDMTE--RGTPP-DAVCCQTVLRVLDRWDQAEEAFGLFEEM 211
            AL +   +   GV PDL T+++ L  C        +A+   E++ ++S     L D+     L+ +++  G + +A  +  E  TR L           +   +++    +   +Q   ALQL  DM +AGVRPN  TFVSV  +   AG   E L     M +  R  P  D   C  ++ +  R  + +EAFGL ++M
Sbjct:  372 ALNIFLKLNRSGVKPDLFTFSSILTVCSSM-----VALEQGEQVHAQSIKSGFLSDIVVATALVNMYNKCGSIEKASKVFIEMSTRTL-----------ISWTSMIAGFAQHGRTQQ--ALQLFEDMRIAGVRPNQVTFVSVLSACSHAGMVNEALGYFESMKKDYRIKPVMDHYAC--LIDMFVRLGRLDEAFGLVKKM 551          
BLAST of mRNA_M-pyrifera_M_contig12879.5770.1 vs. uniprot
Match: A0A2U1N999_ARTAN (Pentatricopeptide repeat-containing protein n=2 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1N999_ARTAN)

HSP 1 Score: 58.9 bits (141), Expect = 2.830e-6
Identity = 60/211 (28.44%), Postives = 100/211 (47.39%), Query Frame = 0
Query:    2 SLVLGLCSGGKWESALQLLELMPSEGVSPDLMTYNTALDACVKKGGQWEMAMSLFEELSESSDPSLLPDLYTVNTLMAVFSNAGMLPRALGLLEEAKTRGLSPDVITYRRANVFLLTLVRACERAVPSQPGVALQLVSDMEMAGVRPNNTTFVSVALSLGRAGQPLECLRVLRDMTERGTPPDAVCCQTVLRVLDRWDQAEEAFGLFEEMR 212
            +L+  L + G+   A ++ + M S G  P   T+N AL   + +  Q+  A+ LFE + E + PS L +L+  NT +      G   RAL +L E ++ GLS  V +Y R       ++ ACE  V ++P VALQ+   M      P+  T +S+  S        E   +L+ +     PP+A      ++     ++ + A  L++EMR
Sbjct:  327 ALIHSLGNNGQVNLAFKVYDCMKSLGHVPTSYTWN-ALLVSLCRAEQYGDALRLFERVQEEA-PSAL-ELHLYNTALTACKQLGSWRRALQILWEMESSGLSIPVTSYCR-------VIEACE--VGNEPRVALQVYQRMVHQKQTPDTLTLLSLIRSCIWGSLYDEVHEILKLV-----PPNANLYNAAVQGFCLREKTDSATKLYQEMR 520          
BLAST of mRNA_M-pyrifera_M_contig12879.5770.1 vs. uniprot
Match: A0A444CE29_ENSVE (DYW_deaminase domain-containing protein n=3 Tax=Musaceae TaxID=4637 RepID=A0A444CE29_ENSVE)

HSP 1 Score: 58.5 bits (140), Expect = 4.120e-6
Identity = 59/241 (24.48%), Postives = 103/241 (42.74%), Query Frame = 0
Query:    2 SLVLGLCSGGKWESALQLLELMPSEGVSPDLMTYNTALDACVKKGGQWEMAMSLFEELSESSDPSLLPDLYTVNTLMAVFSNAGMLPRALGLLEEAKTRGLSPDVITYRRANVFLLTLVRACERAVPSQPGVALQLVSDMEMAGVRPNNTTFVSVALSLGRAGQPLECLRVLRDMTERGTPPDAVCCQTVLRVLDRWDQAEEAFGLFEEMRGRRFALAPGVAEEAYCCGIRALEKLGRWPA 242
            +++ G    G    A++L   M S GV P  +   +A+ AC + G   E+A  + E+ ++SS+     D++    L+ +++  G + RA  + E    R +  DV+ +    +      RA E         A++L  +M++AGVRPN+ TF+ +  +   AG   E       M + G  P       V+ +L R    + A+     M  +      G    A  C I    +LG + A
Sbjct:  314 AMISGYAKSGHASEAVELFHEMISRGVRPGSIAIRSAILACAQVGSL-EIAGRM-EDYTKSSE--FKDDIFVNTALIDMYAKCGSIARAHAMFE----RIIDKDVVVWSAIIMGYGLHGRADE---------AMRLFDEMKLAGVRPNDVTFIGLLSACNHAGLVKEGWSYFNSMKDYGIEPRHQHYACVVDLLARAGHLDGAYEFIRSMPMKPELTVWGALLNA--CKIHGHVRLGEYAA 535          
BLAST of mRNA_M-pyrifera_M_contig12879.5770.1 vs. uniprot
Match: A0A2R6PID8_ACTCC (Pentatricopeptide repeat-containing protein n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6PID8_ACTCC)

HSP 1 Score: 58.5 bits (140), Expect = 4.610e-6
Identity = 47/178 (26.40%), Postives = 87/178 (48.88%), Query Frame = 0
Query:   19 LLELMPSEGVSPDLMTYNTALDACVKKGGQWEMAMSLFEELSESSDPSLLPDLYTVNTLMAVFSNAGMLPRALGLLEEAKTRGLSPDVITYRRANVFLLTLVRAC-ERAVPSQPGVALQLVSDMEMAGVRPNNTTFVSVALSLGRAGQPLECLRVLRDMTERGTPPDAVCCQTVLRVL 195
            +LE M +  V P+L+ YNT L+A + K G+  +A SLFEE+ E+    + PD  T+  L+ ++  A     AL L E  +      D I Y        TL+  C +  +  +     + +  +E  G  P++ ++ ++    G  G+  + ++V  +M+ERG   + + C  +++ L
Sbjct:  677 VLEEMKALEVEPNLVVYNTLLEA-MGKAGKPGLARSLFEEMVENG---VNPDEKTLTALVKIYGKARWAKDALELWERMRLNKWPMDFILYN-------TLLSMCADLGLEEEAERLFEDMKGLERCG--PDSWSYTAMLNVYGSGGKVDKAMKVFNEMSERGVELNVMGCTCLVQCL 841          
BLAST of mRNA_M-pyrifera_M_contig12879.5770.1 vs. uniprot
Match: A0A8B8JP45_ABRPR (pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8JP45_ABRPR)

HSP 1 Score: 58.2 bits (139), Expect = 5.730e-6
Identity = 57/211 (27.01%), Postives = 89/211 (42.18%), Query Frame = 0
Query:    5 LGLCSGGKWESALQLLELMPSEGVSPDLMTYNTALDACVKKGGQWEMAMSLFEEL-SESSDPSLLPDLYTVNTLMAVFSNAGMLPRALGLLEEAKTRGLSPDVITYRRANVFLLTLVRACERAVPSQPGVALQLVSDMEMAGVRPNNTTFVSVALSLGRAGQPLECLRVLRDMT-ERGTPP--DAVCCQTVLRVLDRWDQAEEAFGLFEEM 211
            L  C  G    AL L   +   G+ PDL T+++ L  C +      +A+   E++ +++     L D+    +L+ +++  G + RA     E  TR +           +   +++        SQ   AL L  DM +AGVRPN  TFV V  +   AG+  E L     M  E    P  D   C   + V  R  + EEAF   ++M
Sbjct:  360 LSACQCGS--EALNLFSKLNRSGMKPDLFTFSSVLSVCSRM-----VALEQGEQIHAQTIKTGFLSDVVVGTSLINMYNKCGSIERASKAFLEMSTRTM-----------ISWTSMITGFAHHGMSQQ--ALHLFEDMRLAGVRPNQITFVGVLAACSHAGRVREALNYFEIMKKEYKIKPVMDHYACMVDMFV--RLGKLEEAFNFIKKM 548          
BLAST of mRNA_M-pyrifera_M_contig12879.5770.1 vs. uniprot
Match: A0A5N5F332_9ROSA (Pentatricopeptide repeat-containing protein n=1 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5F332_9ROSA)

HSP 1 Score: 57.4 bits (137), Expect = 6.970e-6
Identity = 58/212 (27.36%), Postives = 88/212 (41.51%), Query Frame = 0
Query:   14 ESALQLLELMPSEGVSPDLMTYNTALDACVK---------------KGGQWEMAMSLFEELSESSDPSLLPDLYTVNTLMAVFSNAGMLPRAL-----------GLLEEA-----KTRGLSPDVITYRRANVFLLTLVRACERAVPSQPGVALQLVSDMEMAGVRPNNTTFVSVALSLGRAGQPLECLRVLRDMTERGTPPDAVCCQTVLRV 194
            + A+Q+L  M   G  P L  +   L + VK               K G  E A SL   LSE      LPDL+T NTL++++S  GM   AL           G + EA     + +G +P+ ITY     F+    R  +         +L+L   M+   + P   T+ S+   L    +  +  ++L +M ER   PD V C T++  
Sbjct:   49 QGAIQVLGHMRVHGFKPHLHAFTVLLSSLVKHRLTNMVWKLIHACCKSGGVEKAESL---LSEMEFKCALPDLFTYNTLISLYSKRGMHYEALSVRDRMERARVGRMREAVRLFREIKGATPNHITY---TTFIDGYCRVNDLEE------SLRLCEVMKAKELYPGVVTYNSILRKLYEESRMRDVNKLLNEMGERNVEPDNVTCNTLINA 248          
BLAST of mRNA_M-pyrifera_M_contig12879.5770.1 vs. uniprot
Match: A0A328ECE2_9ASTE (Uncharacterized protein n=2 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328ECE2_9ASTE)

HSP 1 Score: 57.0 bits (136), Expect = 1.410e-5
Identity = 26/96 (27.08%), Postives = 52/96 (54.17%), Query Frame = 0
Query:   12 KWESALQLLELMPSEGVSPDLMTYNTALDACVKKGGQWEMAMSLFEELSESSDPSLLPDLYTVNTLMAVFSNAGMLPRALGLLEEAKTRGLSPDVI 107
            K++ A+ + + +   G+SP+L+ YN  LD   +KGG W M +S+ +E+  +    L  D +T +T+++  +  G+   A    +  K +G  P ++
Sbjct:  236 KYDKAIAMFKYIKERGLSPNLVMYNVMLDVYGRKGGSWNMILSILDEMRSNG---LAFDEFTCSTVISACAREGLFEEAKKFFDGMKLQGYVPGIV 328          
BLAST of mRNA_M-pyrifera_M_contig12879.5770.1 vs. uniprot
Match: A0A812UAR4_SYMPI (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812UAR4_SYMPI)

HSP 1 Score: 56.2 bits (134), Expect = 2.110e-5
Identity = 39/103 (37.86%), Postives = 55/103 (53.40%), Query Frame = 0
Query:   12 KWESALQLLELMPSEGVSPDLMTYNTALDACVKKGGQWEMAMSLFEELSESSDPSLL--PDLYTVNTLMAVFSNAGMLPRALGLLEEAKTRGLSPDVITYRRA 112
            KW++AL  L L  SEG+ P+L TYN+A+ AC  K  +W  +M L       +D  LL   D  T+ +L+   S+ G    AL LL  +K  G SP +I +  A
Sbjct:  158 KWQAALHHLHLYCSEGLIPELTTYNSAISAC-SKAARWAWSMHL-------ADTGLLLRADEITMGSLITACSSQGYWRLALQLLHASKHGG-SPSLIAFHSA 251          
BLAST of mRNA_M-pyrifera_M_contig12879.5770.1 vs. uniprot
Match: A0A813F1B2_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813F1B2_POLGL)

HSP 1 Score: 56.2 bits (134), Expect = 2.410e-5
Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    6 GLCSGGKWESALQLLELMPSEGVSPDLMTYNTALDACVKKGGQWEMAMSL 55
            G  S G+W  AL LLE M S GVSPD ++YNTA+ +C +KG +WE+A++L
Sbjct:  186 GCLSEGRWPRALHLLERMFSLGVSPDAISYNTAI-SCSEKGSRWEVALAL 234          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12879.5770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNK0_ECTSI1.020e-6557.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2P6PG98_ROSCH3.030e-728.00Putative tetratricopeptide-like helical domain, DY... [more]
A0A2U1N999_ARTAN2.830e-628.44Pentatricopeptide repeat-containing protein n=2 Ta... [more]
A0A444CE29_ENSVE4.120e-624.48DYW_deaminase domain-containing protein n=3 Tax=Mu... [more]
A0A2R6PID8_ACTCC4.610e-626.40Pentatricopeptide repeat-containing protein n=1 Ta... [more]
A0A8B8JP45_ABRPR5.730e-627.01pentatricopeptide repeat-containing protein At3g24... [more]
A0A5N5F332_9ROSA6.970e-627.36Pentatricopeptide repeat-containing protein n=1 Ta... [more]
A0A328ECE2_9ASTE1.410e-527.08Uncharacterized protein n=2 Tax=Cuscuta sect. Clei... [more]
A0A812UAR4_SYMPI2.110e-537.86Hypothetical protein n=1 Tax=Symbiodinium pilosum ... [more]
A0A813F1B2_POLGL2.410e-554.00Hypothetical protein n=2 Tax=Polarella glacialis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 69..109
e-value: 3.8E-7
score: 30.2
coord: 5..44
e-value: 2.3E-7
score: 30.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 198..215
e-value: 0.26
score: 11.6
coord: 152..180
e-value: 0.047
score: 13.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 72..106
e-value: 1.6E-4
score: 19.6
coord: 159..185
e-value: 7.4E-4
score: 17.5
coord: 3..31
e-value: 1.8E-5
score: 22.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 70..104
score: 10.172
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 149..183
score: 9.383
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 31..66
score: 9.931
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 184..218
score: 7.936
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 223..253
score: 5.404
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 112..148
score: 6.062
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1..30
score: 9.569
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 113..264
e-value: 3.1E-22
score: 81.3
coord: 2..112
e-value: 4.0E-25
score: 90.8
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 134..249
coord: 3..109
coord: 46..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12879contigM-pyrifera_M_contig12879:491..8415 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12879.5770.1mRNA_M-pyrifera_M_contig12879.5770.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12879 491..8415 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12879.5770.1 ID=prot_M-pyrifera_M_contig12879.5770.1|Name=mRNA_M-pyrifera_M_contig12879.5770.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=267bp
FSLVLGLCSGGKWESALQLLELMPSEGVSPDLMTYNTALDACVKKGGQWE
MAMSLFEELSESSDPSLLPDLYTVNTLMAVFSNAGMLPRALGLLEEAKTR
GLSPDVITYRRANVFLLTLVRACERAVPSQPGVALQLVSDMEMAGVRPNN
TTFVSVALSLGRAGQPLECLRVLRDMTERGTPPDAVCCQTVLRVLDRWDQ
AEEAFGLFEEMRGRRFALAPGVAEEAYCCGIRALEKLGRWPAAVALLEEW
RALDAYDEDKDAVVGDW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf