prot_M-pyrifera_M_contig128643.5752.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig128643.5752.1
Unique Nameprot_M-pyrifera_M_contig128643.5752.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length166
Homology
BLAST of mRNA_M-pyrifera_M_contig128643.5752.1 vs. uniprot
Match: A0A6I3ACY5_9ACTN (Helix-turn-helix domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A6I3ACY5_9ACTN)

HSP 1 Score: 247 bits (630), Expect = 2.990e-81
Identity = 133/165 (80.61%), Postives = 147/165 (89.09%), Query Frame = 0
Query:    1 SKRVGDRLRAIRRQKRLSLQEVEAASTQEFKASVLGAYERGERAISVPRLQRLARFYNVPVDQLLPADIGPSFGLEPTTESVIDLTERPGRREGESITIDLTRLETLSGPEAEMLNRYLTMIQVQRQDFNGRVLTIRANDLQALAAILGTGIDGAGPRLHDLGLS 165
            S++VG+RLR+IRRQKRLSLQEVEA S QEFKASVLGAYERGERAISVPRLQRLARFY+VPVDQLLP D GP FG+E T  +VIDLTERP R  G ++TIDLTRLE L GPEA+ML+RYLTMIQV+RQDFNGRVLTIR +D QALAAILGTG+DGAG RL DLGLS
Sbjct:   17 SRKVGERLRSIRRQKRLSLQEVEAKSRQEFKASVLGAYERGERAISVPRLQRLARFYSVPVDQLLPMDEGPDFGVE-TNAAVIDLTERPSRPAGVAVTIDLTRLEQLRGPEADMLSRYLTMIQVKRQDFNGRVLTIRRDDHQALAAILGTGVDGAGNRLDDLGLS 180          
BLAST of mRNA_M-pyrifera_M_contig128643.5752.1 vs. uniprot
Match: A0A3M2G078_ACTSX (Transcriptional regulator (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2G078_ACTSX)

HSP 1 Score: 242 bits (618), Expect = 8.380e-80
Identity = 131/154 (85.06%), Postives = 139/154 (90.26%), Query Frame = 0
Query:    1 SKRVGDRLRAIRRQKRLSLQEVEAASTQEFKASVLGAYERGERAISVPRLQRLARFYNVPVDQLLPADIGPSFGLEPTTESVIDLTERPGRREGESITIDLTRLETLSGPEAEMLNRYLTMIQVQRQDFNGRVLTIRANDLQALAAILGTGIDG 154
            SKRVG+RLRAIRRQKRLSLQEVEAAS QEFKASVLGAYERGERAISVPRLQRLARFY+VPVDQLLP D GPSFG+       IDLTERP RR G+ ITIDLT+LE LSGPEA+MLNRYLTMIQVQRQDFNGRVLTIR+ DLQALAAILGTGI+G
Sbjct:    9 SKRVGERLRAIRRQKRLSLQEVEAASNQEFKASVLGAYERGERAISVPRLQRLARFYSVPVDQLLPPDSGPSFGV--ADAETIDLTERPARRPGDPITIDLTKLEQLSGPEADMLNRYLTMIQVQRQDFNGRVLTIRSTDLQALAAILGTGIEG 160          
BLAST of mRNA_M-pyrifera_M_contig128643.5752.1 vs. uniprot
Match: A0A7Y1U4D3_9ACTN (Transcriptional regulator n=2 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y1U4D3_9ACTN)

HSP 1 Score: 235 bits (599), Expect = 1.320e-76
Identity = 128/165 (77.58%), Postives = 143/165 (86.67%), Query Frame = 0
Query:    1 SKRVGDRLRAIRRQKRLSLQEVEAASTQEFKASVLGAYERGERAISVPRLQRLARFYNVPVDQLLPADIGPSFGLEPTTESVIDLTERPGRREGESITIDLTRLETLSGPEAEMLNRYLTMIQVQRQDFNGRVLTIRANDLQALAAILGTGIDGAGPRLHDLGLS 165
            S++VG+RLRAIRRQKRLSLQEVEA S QEFKASVLGAYERGERAISVPRL++LARFY+VPVDQLLP +  P FG+E   +  IDL ERP R    S+TIDLT+LE LSGPEA+ML+RYLTMIQVQRQDFNGRVLTIR +DLQALAAILGTGI+GA PRL  LGLS
Sbjct:   13 SRKVGERLRAIRRQKRLSLQEVEANSAQEFKASVLGAYERGERAISVPRLRKLARFYSVPVDQLLPLEGAPDFGVE--VDETIDLRERPTRAATGSLTIDLTKLEKLSGPEADMLSRYLTMIQVQRQDFNGRVLTIRRDDLQALAAILGTGIEGAAPRLDALGLS 175          
BLAST of mRNA_M-pyrifera_M_contig128643.5752.1 vs. uniprot
Match: A0A2D6UC77_9ACTN (Transcriptional regulator n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6UC77_9ACTN)

HSP 1 Score: 231 bits (589), Expect = 3.370e-75
Identity = 123/165 (74.55%), Postives = 136/165 (82.42%), Query Frame = 0
Query:    1 SKRVGDRLRAIRRQKRLSLQEVEAASTQEFKASVLGAYERGERAISVPRLQRLARFYNVPVDQLLPADIGPSFGLEPTTESVIDLTERPGRREGESITIDLTRLETLSGPEAEMLNRYLTMIQVQRQDFNGRVLTIRANDLQALAAILGTGIDGAGPRLHDLGLS 165
            SKRVG+R+R+IRRQKRLSLQEVEA+S QEFKASVLGAYERGERAISVPRLQRL+RFYNVP DQLLPAD GPSFG+    E    L +R GR   + ITIDLT+L +LSGPEAEML +YLTMIQVQRQDFNGRVLT+R  D  ALAAILG G+DG   RL  LGLS
Sbjct:    6 SKRVGERIRSIRRQKRLSLQEVEASSNQEFKASVLGAYERGERAISVPRLQRLSRFYNVPADQLLPADAGPSFGVNSGDEGAAGLDDRSGRPAADPITIDLTQLASLSGPEAEMLTQYLTMIQVQRQDFNGRVLTVREQDRLALAAILGAGLDGVAARLESLGLS 170          
BLAST of mRNA_M-pyrifera_M_contig128643.5752.1 vs. uniprot
Match: A0A7Y2GJP7_9ACTN (Transcriptional regulator (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GJP7_9ACTN)

HSP 1 Score: 226 bits (577), Expect = 1.920e-73
Identity = 124/160 (77.50%), Postives = 139/160 (86.88%), Query Frame = 0
Query:    1 SKRVGDRLRAIRRQKRLSLQEVEAASTQEFKASVLGAYERGERAISVPRLQRLARFYNVPVDQLLPADIGPSFGLEPTTESVIDLTERPGRREGESITIDLTRLETLSGPEAEMLNRYLTMIQVQRQDFNGRVLTIRANDLQALAAILGTGIDGAGPRLH 160
            S++VGDRLRAIRRQKRLSLQEVEA S QEFKASVLGAYERGERAISVPRLQRLARFYNVPVDQLLP +  P FG++   E  IDL++R   R+  S+TIDLTRL+ LSGPEA+MLNRYL M+QVQRQDFNGRVLTIR +DLQALAAILGTG++GA PRL 
Sbjct:   12 SQKVGDRLRAIRRQKRLSLQEVEATSEQEFKASVLGAYERGERAISVPRLQRLARFYNVPVDQLLPQEDIPDFGVD--AEPSIDLSDR-SERQPISVTIDLTRLDELSGPEADMLNRYLQMVQVQRQDFNGRVLTIRRDDLQALAAILGTGVEGAAPRLE 168          
BLAST of mRNA_M-pyrifera_M_contig128643.5752.1 vs. uniprot
Match: A0A2E8LAX2_9ACTN (Transcriptional regulator n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LAX2_9ACTN)

HSP 1 Score: 225 bits (574), Expect = 7.630e-73
Identity = 122/165 (73.94%), Postives = 134/165 (81.21%), Query Frame = 0
Query:    1 SKRVGDRLRAIRRQKRLSLQEVEAASTQEFKASVLGAYERGERAISVPRLQRLARFYNVPVDQLLPADIGPSFGLEPTTESVIDLTERPGRREGESITIDLTRLETLSGPEAEMLNRYLTMIQVQRQDFNGRVLTIRANDLQALAAILGTGIDGAGPRLHDLGLS 165
            SKRVG+R+R IRRQKRLSLQEVEAAS+QEFKASVLGAYERGERAISVPRLQRL+RFYNVP DQLLPAD GPSFG+    +    L +  GR     ITIDLT+L +LSGPEAEML +YLTMIQVQRQDFNGRVLT+R  D  ALAAILGT +DG   RL  LGLS
Sbjct:   11 SKRVGERIREIRRQKRLSLQEVEAASSQEFKASVLGAYERGERAISVPRLQRLSRFYNVPADQLLPADAGPSFGVNTGDDGPGGLKDHSGRPTASPITIDLTQLSSLSGPEAEMLTQYLTMIQVQRQDFNGRVLTVREQDRLALAAILGTSLDGVATRLEALGLS 175          
BLAST of mRNA_M-pyrifera_M_contig128643.5752.1 vs. uniprot
Match: A0A6G0AA67_9ACTN (Transcriptional regulator n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0AA67_9ACTN)

HSP 1 Score: 220 bits (560), Expect = 1.060e-70
Identity = 126/166 (75.90%), Postives = 139/166 (83.73%), Query Frame = 0
Query:    2 KRVGDRLRAIRRQKRLSLQEVEAASTQEFKASVLGAYERGERAISVPRLQRLARFYNVPVDQLLPADIGPSFGLEPTTESVIDLTERPGRREGE-SITIDLTRLETLSGPEAEMLNRYLTMIQVQRQDFNGRVLTIRANDLQALAAILGTGIDGAGPRLHDLGLSV 166
            KRVG+RLRAIRRQKRLSLQEVEA S QEFKASVLGAYERGERAISVPRLQRLAR YNVPVDQLLP + GP  G     ES IDLT+  GR E   +I IDLTRLE LSGPEA+ML+RYLTMIQVQRQDFNGR+LTIR +DL+A+A ILG G+D AG RL DLGL++
Sbjct:   18 KRVGERLRAIRRQKRLSLQEVEAISEQEFKASVLGAYERGERAISVPRLQRLARLYNVPVDQLLPPEDGPVGG-----ES-IDLTDGGGRTEATVAIKIDLTRLENLSGPEADMLSRYLTMIQVQRQDFNGRMLTIRRDDLRAIACILGVGVDSAGSRLDDLGLAL 177          
BLAST of mRNA_M-pyrifera_M_contig128643.5752.1 vs. uniprot
Match: A0A538DUH6_9ACTN (Transcriptional regulator n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DUH6_9ACTN)

HSP 1 Score: 220 bits (560), Expect = 1.140e-70
Identity = 118/165 (71.52%), Postives = 139/165 (84.24%), Query Frame = 0
Query:    1 SKRVGDRLRAIRRQKRLSLQEVEAASTQEFKASVLGAYERGERAISVPRLQRLARFYNVPVDQLLPADIGPSFGLEPTTESVIDLTERPGRREGESITIDLTRLETLSGPEAEMLNRYLTMIQVQRQDFNGRVLTIRANDLQALAAILGTGIDGAGPRLHDLGLS 165
            +++VG+RLRAIRRQKRLSLQEVE+ S QEFKASVLGAYERGERAISVPRL+RL+RFY VPVDQLLP D GP FG+E     +IDLTER  R+ G  + +DLTRL+ L+GPEAEML RY+TMIQV+RQDFNGR+LTIR +D QA+AAILGTG D A  RL +LG+S
Sbjct:   17 TRKVGERLRAIRRQKRLSLQEVESKSNQEFKASVLGAYERGERAISVPRLKRLSRFYAVPVDQLLPPDDGPDFGVE---APIIDLTERSPRKPGMPVVLDLTRLDRLAGPEAEMLRRYITMIQVRRQDFNGRMLTIRRDDHQAIAAILGTGPDAAPNRLDELGVS 178          
BLAST of mRNA_M-pyrifera_M_contig128643.5752.1 vs. uniprot
Match: UPI001AA03BF8 (transcriptional regulator n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA03BF8)

HSP 1 Score: 216 bits (550), Expect = 2.720e-69
Identity = 124/167 (74.25%), Postives = 135/167 (80.84%), Query Frame = 0
Query:    1 SKRVGDRLRAIRRQKRLSLQEVEAASTQEFKASVLGAYERGERAISVPRLQRLARFYNVPVDQLLPADIGPSF-GLEPTTESVIDLTERPGRREGESITIDLTRLETLSGPEAEMLNRYLTMIQVQRQDFNGRVLTIRANDLQALAAILGTGIDGAGPRLHDLGLSV 166
            S++VG+RLRAIRRQKRLSLQEVEAAS QEFKASVLGAYERGERAISVPRLQRLARFYNVPVDQLLP D GP F G E    + I   E        ++TIDL RLE LSGPEAEMLNRYLTMIQVQRQDFNGR+LTIR  DL+A+A ILG G+D A  RL DLGLS+
Sbjct:   13 SRKVGERLRAIRRQKRLSLQEVEAASEQEFKASVLGAYERGERAISVPRLQRLARFYNVPVDQLLPPDEGPGFAGAE---RAPIGAAEA-------AVTIDLRRLENLSGPEAEMLNRYLTMIQVQRQDFNGRMLTIRREDLRAIACILGVGVDHATGRLDDLGLSL 169          
BLAST of mRNA_M-pyrifera_M_contig128643.5752.1 vs. uniprot
Match: UPI001E3E09A3 (transcriptional regulator n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E3E09A3)

HSP 1 Score: 211 bits (536), Expect = 3.910e-67
Identity = 120/164 (73.17%), Postives = 132/164 (80.49%), Query Frame = 0
Query:    1 SKRVGDRLRAIRRQKRLSLQEVEAASTQEFKASVLGAYERGERAISVPRLQRLARFYNVPVDQLLPADIGPSFGLEPTTESVIDLTERPGRREGESITIDLTRLETLSGPEAEMLNRYLTMIQVQRQDFNGRVLTIRANDLQALAAILGTGIDGAGPRLHDLGL 164
            S++VGDRLRAIRRQKRLSLQ+VEAAS  EFKASVLGAYERGERAISVPRLQRLARFYNVPVDQLLP D GP+F  +     +ID  ER       S TIDL RLE L+GPEA+MLNRYL+MIQVQRQDFNGRVLTIR +DL+A+A ILG G   A  RL DLGL
Sbjct:   14 SRKVGDRLRAIRRQKRLSLQDVEAASDLEFKASVLGAYERGERAISVPRLQRLARFYNVPVDQLLPNDDGPAFAEDGPAMGIID--ER-------SFTIDLRRLEDLTGPEADMLNRYLSMIQVQRQDFNGRVLTIRKDDLRAIACILGVGPSSATERLGDLGL 168          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128643.5752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I3ACY5_9ACTN2.990e-8180.61Helix-turn-helix domain-containing protein n=2 Tax... [more]
A0A3M2G078_ACTSX8.380e-8085.06Transcriptional regulator (Fragment) n=1 Tax=Actin... [more]
A0A7Y1U4D3_9ACTN1.320e-7677.58Transcriptional regulator n=2 Tax=Acidimicrobiales... [more]
A0A2D6UC77_9ACTN3.370e-7574.55Transcriptional regulator n=4 Tax=Acidimicrobiacea... [more]
A0A7Y2GJP7_9ACTN1.920e-7377.50Transcriptional regulator (Fragment) n=1 Tax=Acidi... [more]
A0A2E8LAX2_9ACTN7.630e-7373.94Transcriptional regulator n=1 Tax=Acidimicrobiacea... [more]
A0A6G0AA67_9ACTN1.060e-7075.90Transcriptional regulator n=2 Tax=Bacteria TaxID=2... [more]
A0A538DUH6_9ACTN1.140e-7071.52Transcriptional regulator n=1 Tax=Actinomycetia ba... [more]
UPI001AA03BF82.720e-6974.25transcriptional regulator n=1 Tax=Rhabdothermincol... [more]
UPI001E3E09A33.910e-6773.17transcriptional regulator n=1 Tax=Rhabdothermincol... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001387Cro/C1-type helix-turn-helix domainSMARTSM00530mbf_short4coord: 7..64
e-value: 9.3E-9
score: 45.1
IPR001387Cro/C1-type helix-turn-helix domainPROSITEPS50943HTH_CROC1coord: 8..64
score: 11.825
IPR038099BldD-like, C-terminal domain superfamilyGENE3D1.10.10.1930coord: 90..165
e-value: 4.1E-21
score: 76.5
NoneNo IPR availablePFAMPF13560HTH_31coord: 4..64
e-value: 9.0E-9
score: 35.6
NoneNo IPR availableGENE3D1.10.260.40coord: 1..66
e-value: 1.4E-28
score: 100.2
NoneNo IPR availablePANTHERPTHR46797:SF7coord: 3..68
NoneNo IPR availablePANTHERPTHR46797FAMILY NOT NAMEDcoord: 3..68
IPR010982Lambda repressor-like, DNA-binding domain superfamilySUPERFAMILY47413lambda repressor-like DNA-binding domainscoord: 3..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig128643contigM-pyrifera_M_contig128643:2..499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig128643.5752.1mRNA_M-pyrifera_M_contig128643.5752.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig128643 2..499 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig128643.5752.1 ID=prot_M-pyrifera_M_contig128643.5752.1|Name=mRNA_M-pyrifera_M_contig128643.5752.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=166bp
SKRVGDRLRAIRRQKRLSLQEVEAASTQEFKASVLGAYERGERAISVPRL
QRLARFYNVPVDQLLPADIGPSFGLEPTTESVIDLTERPGRREGESITID
LTRLETLSGPEAEMLNRYLTMIQVQRQDFNGRVLTIRANDLQALAAILGT
GIDGAGPRLHDLGLSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001387Cro/C1-type_HTH
IPR038099BldD-like_C_sf
IPR010982Lambda_DNA-bd_dom_sf