prot_M-pyrifera_M_contig128546.5733.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig128546.5733.1
Unique Name	prot_M-pyrifera_M_contig128546.5733.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	101

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig128546.5733.1 vs. uniprot
Match: A0A6I3WSG5_9ACTN (Histidine kinase n=2 Tax=root TaxID=1 RepID=A0A6I3WSG5_9ACTN)

HSP 1 Score: 103 bits (258), Expect = 4.990e-24
Identity = 62/103 (60.19%), Postives = 71/103 (68.93%), Query Frame = 0

Query:    2 FGLSAVIVLLASAVAAGWLARRFTEPIRSIERATTAIASGRLDTRVAETS---TDEVGQLARSVNSMAGDLERSRAAEQQFLLSITHDLRTPLTSISGYAEAL 101
            F L+A+  L   A AA  L RR T PIR    AT  IA G L TR+ E S   TDE+  LARSVN+MAG+LERS   EQQFLLS++HDLRTPLTSI GYAEA+
Sbjct:  163 FLLAALATLALGAGAAILLGRRLTRPIRDASEATHRIARGELSTRLPEPSPRHTDELADLARSVNAMAGELERSHLLEQQFLLSVSHDLRTPLTSIRGYAEAI 265

[Close]

BLAST of mRNA_M-pyrifera_M_contig128546.5733.1 vs. uniprot
Match: A0A7X9KGH7_9ACTN (HAMP domain-containing protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9KGH7_9ACTN)

HSP 1 Score: 98.2 bits (243), Expect = 7.950e-23
Identity = 58/100 (58.00%), Postives = 69/100 (69.00%), Query Frame = 0

Query:    5 SAVIVLLASAVAAGWLARRFTEPIRSIERATTAIASGRLDTRVAETST---DEVGQLARSVNSMAGDLERSRAAEQQFLLSITHDLRTPLTSISGYAEAL 101
            S   +LLA   AA  L RR T PIR    AT  IA+G+L TR+ E      DE+ +L+R+VN+MA  LERSR  EQQFLLS+THDLRTPLTSI GYAEA+
Sbjct:  169 SGATILLALG-AAYLLGRRLTRPIREASTATQHIAAGQLSTRITEPPAHHHDELAELSRNVNAMAASLERSRGLEQQFLLSVTHDLRTPLTSIRGYAEAI 267

[Close]

BLAST of mRNA_M-pyrifera_M_contig128546.5733.1 vs. uniprot
Match: A0A538JS65_9ACTN (Histidine kinase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538JS65_9ACTN)

HSP 1 Score: 100 bits (248), Expect = 1.150e-22
Identity = 54/102 (52.94%), Postives = 70/102 (68.63%), Query Frame = 0

Query:    1 WFGLSAVIVLLASAVAAGWLARRFTEPIRSIERATTAIASGRLDTRVAET-STDEVGQLARSVNSMAGDLERSRAAEQQFLLSITHDLRTPLTSISGYAEAL 101
            WF L+A++ L A+   A  L  R T P+R  +RAT  IA+G L  R+ E    DE+  L RS+NSMA  LERSR  E+QFLL+++HDLRTPLTSI G+AEA+
Sbjct:  147 WFALAAIVTLGAAVAVASVLGSRLTRPLRDAQRATRRIAAGDLSARLPEPRGDDELATLTRSINSMAETLERSRGLERQFLLAVSHDLRTPLTSIRGFAEAI 248

[Close]

BLAST of mRNA_M-pyrifera_M_contig128546.5733.1 vs. uniprot
Match: A0A2E0SZN9_9ACTN (Histidine kinase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0SZN9_9ACTN)

HSP 1 Score: 98.6 bits (244), Expect = 1.950e-22
Identity = 52/104 (50.00%), Postives = 74/104 (71.15%), Query Frame = 0

Query:    1 WFGLSAVIVLLASAVAAGWLARRFTEPIRSIERATTAIASGRLDTRVAETST---DEVGQLARSVNSMAGDLERSRAAEQQFLLSITHDLRTPLTSISGYAEAL 101
            WF L+++  ++ +A+ AG ++R  T PIR+       IA+G LD R+ + +    DEVG+L  S+NSMA +L+RS A E+QFL+S++HDLRTPLTSI GYAEAL
Sbjct:  158 WFLLASLATIVVAALVAGRVSRSLTGPIRASRDVARRIAAGDLDARIPDATAARRDEVGELVASINSMADNLQRSNALERQFLMSVSHDLRTPLTSIKGYAEAL 261

[Close]

BLAST of mRNA_M-pyrifera_M_contig128546.5733.1 vs. uniprot
Match: A0A7C1UG84_9ACTN (Histidine kinase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1UG84_9ACTN)

HSP 1 Score: 99.4 bits (246), Expect = 2.660e-22
Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 0

Query:    1 WFGLSAVIVLLASAVAAGWLARRFTEPIRSIERATTAIASGRLDTRVA---ETSTDEVGQLARSVNSMAGDLERSRAAEQQFLLSITHDLRTPLTSISGYAEAL 101
            WF ++A++ ++  AV    L R  T P+  I R T  +A G L  RV+   E  +DE+G+LARSVN++A  LERSR  EQQFLLS++HDLRTPLTSI G+AEAL
Sbjct:  161 WFLVAALMTVVIGAVVGIRLGRTLTRPVDRIRRTTGELAGGNLQARVSSGDELRSDELGELARSVNTLADSLERSRGLEQQFLLSVSHDLRTPLTSIRGFAEAL 264

[Close]

BLAST of mRNA_M-pyrifera_M_contig128546.5733.1 vs. uniprot
Match: A0A539E191_9ACTN (Histidine kinase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E191_9ACTN)

HSP 1 Score: 97.8 bits (242), Expect = 3.610e-22
Identity = 58/104 (55.77%), Postives = 72/104 (69.23%), Query Frame = 0

Query:    1 WFGLSAVIVLLASAVAAGWLARRFTEPIRSIERATTAIASGRLDTRVAETSTD---EVGQLARSVNSMAGDLERSRAAEQQFLLSITHDLRTPLTSISGYAEAL 101
            +F  +A++  L   +AA   ARRF EPI +   ATT IA+G L TR+ E       E+ +L+R+VNSMA  L+RSR  EQQFLLSI+HDLRTPLTSI GYAEAL
Sbjct:   57 YFVFAALVTALGGLLAAMIAARRFVEPITAASVATTKIANGELATRLPEPPAHQRHELAELSRNVNSMAETLQRSRTLEQQFLLSISHDLRTPLTSIRGYAEAL 160

[Close]

BLAST of mRNA_M-pyrifera_M_contig128546.5733.1 vs. uniprot
Match: A0A3C1L7M6_9ACTN (Histidine kinase n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A3C1L7M6_9ACTN)

HSP 1 Score: 98.2 bits (243), Expect = 6.260e-22
Identity = 58/100 (58.00%), Postives = 69/100 (69.00%), Query Frame = 0

Query:    5 SAVIVLLASAVAAGWLARRFTEPIRSIERATTAIASGRLDTRVAETST---DEVGQLARSVNSMAGDLERSRAAEQQFLLSITHDLRTPLTSISGYAEAL 101
            S   +LLA   AA  L RR T PIR    AT  IA+G+L TR+ E      DE+ +L+R+VN+MA  LERSR  EQQFLLS+THDLRTPLTSI GYAEA+
Sbjct:  169 SGATILLALG-AAYLLGRRLTRPIREASTATQHIAAGQLSTRITEPPAHHHDELAELSRNVNAMAASLERSRGLEQQFLLSVTHDLRTPLTSIRGYAEAI 267

[Close]

BLAST of mRNA_M-pyrifera_M_contig128546.5733.1 vs. uniprot
Match: A0A538D2U1_9ACTN (Histidine kinase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538D2U1_9ACTN)

HSP 1 Score: 98.2 bits (243), Expect = 7.040e-22
Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 0

Query:    1 WFGLSAVIVLLASAVAAGWLARRFTEPIRSIERATTAIASGRLDTRVAETS---TDEVGQLARSVNSMAGDLERSRAAEQQFLLSITHDLRTPLTSISGYAEAL 101
            WF +++   +    + A WL+R  T+ +R+ +  T +IASG L  RV E S    DEV  L+RS+NSMA  LER+R  E+QFL+SITHDLRTPLTSI GYAEAL
Sbjct:  172 WFLIASAGTIAMGFIVALWLSRGLTQRLRAAQATTHSIASGDLSARVPEPSGNAKDEVSDLSRSINSMAMQLERARGLERQFLMSITHDLRTPLTSIQGYAEAL 275

[Close]

BLAST of mRNA_M-pyrifera_M_contig128546.5733.1 vs. uniprot
Match: A0A6I3AEU2_9ACTN (Histidine kinase n=2 Tax=root TaxID=1 RepID=A0A6I3AEU2_9ACTN)

HSP 1 Score: 97.8 bits (242), Expect = 9.040e-22
Identity = 55/104 (52.88%), Postives = 73/104 (70.19%), Query Frame = 0

Query:    1 WFGLSAVIVLLASAVAAGWLARRFTEPIRSIERATTAIASGRLDTRVAET---STDEVGQLARSVNSMAGDLERSRAAEQQFLLSITHDLRTPLTSISGYAEAL 101
            WF L+A   LLA A+ A  L+RR T P+     AT+ IA+G L  RV +    +TDE+ +L+RS+N+MA  LERSR  E+QFL+S++HDLRTP+ SI GYAEAL
Sbjct:  168 WFLLAAAGTLLAGALIATRLSRRLTNPLVDARDATSRIANGDLAARVDDPHPGATDEMSELSRSINAMAASLERSRGLERQFLMSVSHDLRTPMASIQGYAEAL 271

[Close]

BLAST of mRNA_M-pyrifera_M_contig128546.5733.1 vs. uniprot
Match: A0A538H7B7_9ACTN (Histidine kinase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538H7B7_9ACTN)

HSP 1 Score: 97.4 bits (241), Expect = 1.100e-21
Identity = 54/102 (52.94%), Postives = 70/102 (68.63%), Query Frame = 0

Query:    1 WFGLSAVIVLLASAVAAGWLARRFTEPIRSIERATTAIASGRLDTRV-AETSTDEVGQLARSVNSMAGDLERSRAAEQQFLLSITHDLRTPLTSISGYAEAL 101
            WF L+ ++ L AS   A  L  R T P+R  E AT  IA+G L  RV    + DE+  LARS+N+MA +L+RSR  E+QFLLS++HDLRTPLTSI G+AEA+
Sbjct:  146 WFVLATLLALAASVAVAFSLGSRLTRPLRDAEAATRRIAAGDLSARVPVPDNDDELAALARSINAMATELDRSRGLERQFLLSVSHDLRTPLTSIRGFAEAI 247

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig128546.5733.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig128546.5733.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6I3WSG5_9ACTN	4.990e-24	60.19	Histidine kinase n=2 Tax=root TaxID=1 RepID=A0A6I3...	[more]
A0A7X9KGH7_9ACTN	7.950e-23	58.00	HAMP domain-containing protein (Fragment) n=1 Tax=...	[more]
A0A538JS65_9ACTN	1.150e-22	52.94	Histidine kinase n=1 Tax=Actinomycetia bacterium T...	[more]
A0A2E0SZN9_9ACTN	1.950e-22	50.00	Histidine kinase (Fragment) n=1 Tax=Acidimicrobiac...	[more]
A0A7C1UG84_9ACTN	2.660e-22	52.88	Histidine kinase n=1 Tax=Acidimicrobiales bacteriu...	[more]
A0A539E191_9ACTN	3.610e-22	55.77	Histidine kinase (Fragment) n=1 Tax=Acidimicrobiac...	[more]
A0A3C1L7M6_9ACTN	6.260e-22	58.00	Histidine kinase n=2 Tax=Actinobacteria TaxID=2011...	[more]
A0A538D2U1_9ACTN	7.040e-22	52.88	Histidine kinase n=1 Tax=Actinomycetia bacterium T...	[more]
A0A6I3AEU2_9ACTN	9.040e-22	52.88	Histidine kinase n=2 Tax=root TaxID=1 RepID=A0A6I3...	[more]
A0A538H7B7_9ACTN	1.100e-21	52.94	Histidine kinase n=1 Tax=Actinomycetia bacterium T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003660	HAMP domain	SMART	SM00304	HAMP_11	coord: 22..74 e-value: 1.2E-15 score: 68.0
IPR003660	HAMP domain	PFAM	PF00672	HAMP	coord: 19..70 e-value: 3.7E-17 score: 62.4
IPR003660	HAMP domain	PROSITE	PS50885	HAMP	coord: 22..74 score: 11.359
IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	PFAM	PF00512	HisKA	coord: 77..101 e-value: 3.9E-7 score: 30.0
None	No IPR available	GENE3D	1.10.287.130		coord: 19..101 e-value: 1.6E-24 score: 88.4
None	No IPR available	PANTHER	PTHR45528:SF1	SENSOR HISTIDINE KINASE CPXA	coord: 7..101
None	No IPR available	PANTHER	PTHR45528	FAMILY NOT NAMED	coord: 7..101
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 13..17
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 18..101
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..17
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..12
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..17 score: 0.821
None	No IPR available	SUPERFAMILY	158472	HAMP domain-like	coord: 22..71
None	No IPR available	TMHMM	TMhelix		coord: 4..21
IPR036097	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	SUPERFAMILY	47384	Homodimeric domain of signal transducing histidine kinase	coord: 58..101

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig128546	contig	M-pyrifera_M_contig128546:194..496 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig128546.5733.1	mRNA_M-pyrifera_M_contig128546.5733.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig128546 194..496 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig128546.5733.1 ID=prot_M-pyrifera_M_contig128546.5733.1|Name=mRNA_M-pyrifera_M_contig128546.5733.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=101bp
WFGLSAVIVLLASAVAAGWLARRFTEPIRSIERATTAIASGRLDTRVAET
STDEVGQLARSVNSMAGDLERSRAAEQQFLLSITHDLRTPLTSISGYAEA
L

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003660	HAMP_dom
IPR003661	HisK_dim/P
IPR036097	HisK_dim/P_sf