prot_M-pyrifera_M_contig12854.5729.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12854.5729.1
Unique Nameprot_M-pyrifera_M_contig12854.5729.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length49
Homology
BLAST of mRNA_M-pyrifera_M_contig12854.5729.1 vs. uniprot
Match: A0A6V1XUJ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XUJ0_HETAK)

HSP 1 Score: 54.7 bits (130), Expect = 2.270e-7
Identity = 24/42 (57.14%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    1 NGRLVTVFLVVNFMIGSGILNTPQTFRDSGLAATTVIYFIAC 42
            NGR  T+FL++N MIGSGILN PQ F DSG+    ++Y I+C
Sbjct:   61 NGRGGTIFLILNTMIGSGILNQPQVFADSGIIGAFLMYGISC 102          
BLAST of mRNA_M-pyrifera_M_contig12854.5729.1 vs. uniprot
Match: D7FZR9_ECTSI (Transmembrane amino acid transporter protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR9_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 1.090e-6
Identity = 20/41 (48.78%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    1 NGRLVTVFLVVNFMIGSGILNTPQTFRDSGLAATTVIYFIA 41
            N +++T  LV+N+MIGSGILN+PQ F  SG+   T++Y ++
Sbjct:   90 NSKVLTTLLVLNYMIGSGILNSPQVFEGSGIGPATILYAVS 130          
BLAST of mRNA_M-pyrifera_M_contig12854.5729.1 vs. uniprot
Match: A0A6H5KC39_9PHAE (Aa_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC39_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 1.090e-6
Identity = 20/41 (48.78%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    1 NGRLVTVFLVVNFMIGSGILNTPQTFRDSGLAATTVIYFIA 41
            N +++T  LV+N+MIGSGILN+PQ F  SG+   T++Y ++
Sbjct:   90 NSKVLTTLLVLNYMIGSGILNSPQVFEGSGIGPATILYAVS 130          
BLAST of mRNA_M-pyrifera_M_contig12854.5729.1 vs. uniprot
Match: A0A7S2USJ8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USJ8_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 6.410e-5
Identity = 21/40 (52.50%), Postives = 27/40 (67.50%), Query Frame = 0
Query:    1 NGRLVTVFLVVNFMIGSGILNTPQTFRDSGLAATTVIYFI 40
            NG   T+ L++N MIGSGILN P  F  +G+ AT +IY I
Sbjct:   60 NGGGATIVLLINTMIGSGILNQPYVFSQAGIGATLIIYAI 99          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12854.5729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6V1XUJ0_HETAK2.270e-757.14Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D7FZR9_ECTSI1.090e-648.78Transmembrane amino acid transporter protein n=1 T... [more]
A0A6H5KC39_9PHAE1.090e-648.78Aa_trans domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S2USJ8_9STRA6.410e-552.50Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.526

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12854contigM-pyrifera_M_contig12854:104..250 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12854.5729.1mRNA_M-pyrifera_M_contig12854.5729.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12854 104..250 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12854.5729.1 ID=prot_M-pyrifera_M_contig12854.5729.1|Name=mRNA_M-pyrifera_M_contig12854.5729.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=49bp
NGRLVTVFLVVNFMIGSGILNTPQTFRDSGLAATTVIYFIACESCVCG*
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