prot_M-pyrifera_M_contig128343.5694.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig128343.5694.1
Unique Nameprot_M-pyrifera_M_contig128343.5694.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length128
Homology
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BLAST of mRNA_M-pyrifera_M_contig128343.5694.1 vs. uniprot
Match: A0A7I8VKE1_9ANNE (Glycogen debranching enzyme n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VKE1_9ANNE)

HSP 1 Score: 62.8 bits (151), Expect = 6.930e-9
Identity = 45/131 (34.35%), Postives = 73/131 (55.73%), Query Frame = 0 
Query:    4 VVQVVRHNPSTEESVYLFAHTAFEERSRG-SKADHPSVAVAGEFEEELIASVLRVSKS--SYQRHEDLINGMLPTLYWTEPGSKAPARSLYEVKD----GRIHFTRFPPGSVIAFWTSLDAQSAAASKKVR 127
            VV V RHN ++ ES+ L A+TAF++      KA  PS+ ++G+ ++ L    L   +   SY++ E+ ING+     + + G      S+ E+        ++FT+FPPGSVIAF  SL+A+   A  ++R
Sbjct:  636 VVSVTRHNSTSHESIILVAYTAFKQPPHDYPKA--PSMEISGKIQQILYEGRLDKIEGAKSYKKDENFINGLEEYKCFIQEGISPKNSSMVEINSLSDKELVNFTKFPPGSVIAFKVSLNAEPKTAIFQLR 764
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BLAST of mRNA_M-pyrifera_M_contig128343.5694.1 vs. uniprot
Match: R7UWR3_CAPTE (Glycogen debranching enzyme n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UWR3_CAPTE)

HSP 1 Score: 57.0 bits (136), Expect = 7.250e-7
Identity = 40/131 (30.53%), Postives = 62/131 (47.33%), Query Frame = 0 
Query:    5 VQVVRHNPSTEESVYLFAHTAFEERSRGSKADHPSVAVAGEFEEELIASVL--RVSKSSYQRHEDLINGMLPTLYWTEPGSKAPARSLYEVKDGR------IHFTRFPPGSVIAFWTSLDAQSAAASKKVR 127
            V V RHNP + +SV L A T F   +  +     ++ + G  +E ++   L  R + S + R+ D +NG+   +       K     L E+K         + F  FPPGSVIAF  SL+A + ++   VR
Sbjct:  739 VSVTRHNPVSHQSVILVARTVFSTPANMNAPYSQTLQIPGMIDEIILEGTLKPRSNASKFTRNADYLNGLTDVVLSLREHLKVEESDLVELKMNNTSGLQELEFACFPPGSVIAFKVSLNANNKSSILNVR 869
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128343.5694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7I8VKE1_9ANNE6.930e-934.35Glycogen debranching enzyme n=1 Tax=Dimorphilus gy... [more]
R7UWR3_CAPTE7.250e-730.53Glycogen debranching enzyme n=1 Tax=Capitella tele... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032788Glycogen debranching enzyme, central domainPFAMPF14702hGDE_centralcoord: 4..120
e-value: 3.1E-15
score: 56.5
IPR010401Glycogen debranching enzymePANTHERPTHR10569GLYCOGEN DEBRANCHING ENZYMEcoord: 4..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig128343contigM-pyrifera_M_contig128343:112..495 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig128343.5694.1mRNA_M-pyrifera_M_contig128343.5694.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig128343 85..495 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig128343.5694.1 ID=prot_M-pyrifera_M_contig128343.5694.1|Name=mRNA_M-pyrifera_M_contig128343.5694.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=128bp
MGCVVQVVRHNPSTEESVYLFAHTAFEERSRGSKADHPSVAVAGEFEEEL
IASVLRVSKSSYQRHEDLINGMLPTLYWTEPGSKAPARSLYEVKDGRIHF
TRFPPGSVIAFWTSLDAQSAAASKKVRT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032788AGL_central
IPR010401AGL/Gdb1