prot_M-pyrifera_M_contig128198.5666.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig128198.5666.1
Unique Nameprot_M-pyrifera_M_contig128198.5666.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length156
Homology
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BLAST of mRNA_M-pyrifera_M_contig128198.5666.1 vs. uniprot
Match: A0A1I2ABN1_9BACT (Por secretion system C-terminal sorting domain-containing protein n=2 Tax=Chitinophaga sp. CF118 TaxID=1884367 RepID=A0A1I2ABN1_9BACT)

HSP 1 Score: 63.5 bits (153), Expect = 8.750e-9
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0 
Query:    1 MTCDRPTVQGWEQFTVIDAGNDQIALQGSNGLYVSSENG 39
            M C+RPTVQGWEQF V+DAGN +IALQ +NG YVSSENG
Sbjct:  476 MNCNRPTVQGWEQFLVVDAGNGKIALQ-NNGKYVSSENG 513
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BLAST of mRNA_M-pyrifera_M_contig128198.5666.1 vs. uniprot
Match: A0A1I0R294_9BACT (Por secretion system C-terminal sorting domain-containing protein n=4 Tax=Chitinophaga TaxID=79328 RepID=A0A1I0R294_9BACT)

HSP 1 Score: 62.4 bits (150), Expect = 2.200e-8
Identity = 29/40 (72.50%), Postives = 34/40 (85.00%), Query Frame = 0 
Query:    1 MTCDRPTVQGWEQFTVIDAGNDQIALQGSNGLYVSSENGT 40
            M C+R TVQGWEQFTV+DAGN ++AL  + GLYVSSENGT
Sbjct:  909 MNCNRATVQGWEQFTVVDAGNGKVALS-NQGLYVSSENGT 947
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BLAST of mRNA_M-pyrifera_M_contig128198.5666.1 vs. uniprot
Match: A0A1I0R1Q5_9BACT (Por secretion system C-terminal sorting domain-containing protein n=2 Tax=Chitinophaga TaxID=79328 RepID=A0A1I0R1Q5_9BACT)

HSP 1 Score: 58.9 bits (141), Expect = 3.170e-7
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0 
Query:    1 MTCDRPTVQGWEQFTVIDAGNDQIALQGSNGLYVSSENGT 40
            M C+R  VQGWEQF+V+DAGN ++AL  + GLYVSSENGT
Sbjct:  341 MNCNRAAVQGWEQFSVVDAGNGKVALS-NQGLYVSSENGT 379
[Close]
BLAST of mRNA_M-pyrifera_M_contig128198.5666.1 vs. uniprot
Match: A0A1I0PTD5_9BACT (Por secretion system C-terminal sorting domain-containing protein n=2 Tax=Chitinophaga TaxID=79328 RepID=A0A1I0PTD5_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 7.450e-6
Identity = 24/36 (66.67%), Postives = 28/36 (77.78%), Query Frame = 0 
Query:    1 MTCDRPTVQGWEQFTVIDAGNDQIALQGSNGLYVSS 36
            M C+R  V  WE FTV+DAGN  IALQG+NGLYVS+
Sbjct:  806 MNCNRTVVGAWENFTVVDAGNGTIALQGNNGLYVSA 841
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128198.5666.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A1I2ABN1_9BACT8.750e-976.92Por secretion system C-terminal sorting domain-con... [more]
A0A1I0R294_9BACT2.200e-872.50Por secretion system C-terminal sorting domain-con... [more]
A0A1I0R1Q5_9BACT3.170e-767.50Por secretion system C-terminal sorting domain-con... [more]
A0A1I0PTD5_9BACT7.450e-666.67Por secretion system C-terminal sorting domain-con... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.80.10.50coord: 1..105
e-value: 4.3E-24
score: 87.0
IPR008999Actin-crosslinkingSUPERFAMILY50405Actin-crosslinking proteinscoord: 2..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig128198contigM-pyrifera_M_contig128198:20..487 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig128198.5666.1mRNA_M-pyrifera_M_contig128198.5666.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig128198 2..487 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig128198.5666.1 ID=prot_M-pyrifera_M_contig128198.5666.1|Name=mRNA_M-pyrifera_M_contig128198.5666.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=156bp
MTCDRPTVQGWEQFTVIDAGNDQIALQGSNGLYVSSENGTSGMNCNRPAI
GGWEIFDWVDLGNGTFGLQGNNGQFVSSENGAAAMMCNRPTAGGWEAFTW
GTGAGARTGAGNLSDLIVDSASNGISIYPNPASDRLTIDAAGFDKVSIIN
LSGKTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008999Actin-crosslinking