prot_M-pyrifera_M_contig127808.5609.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig127808.5609.1
Unique Nameprot_M-pyrifera_M_contig127808.5609.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length112
Homology
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BLAST of mRNA_M-pyrifera_M_contig127808.5609.1 vs. uniprot
Match: A0A517PQH8_9PLAN (Uncharacterized protein n=2 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PQH8_9PLAN)

HSP 1 Score: 218 bits (554), Expect = 1.520e-71
Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 0 
Query:    1 MMLIMLILLSPLIAYLLYKVKQAQGKCCPSCGTPLIPFQHPASKTIQQWKQGGYRCRNCGCLTDLDAKEIPDGPYPKRRTLLLVLIDLNLLLMISFLSLVFFFLPFLRAFR 111
            MMLIMLILLSPLIAYLLYKVKQAQGKCCPSCGTPLIPFQHPASKTIQQWKQGGYRCRNCGCLTDLDAKEIPDGPYPKRRTLLLVLI LNLLLMISFLSLVFFFLPFLRAFR
Sbjct:   12 MMLIMLILLSPLIAYLLYKVKQAQGKCCPSCGTPLIPFQHPASKTIQQWKQGGYRCRNCGCLTDLDAKEIPDGPYPKRRTLLLVLIGLNLLLMISFLSLVFFFLPFLRAFR 122
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BLAST of mRNA_M-pyrifera_M_contig127808.5609.1 vs. uniprot
Match: A0A5A8B9K5_9PLAN (Uncharacterized protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A5A8B9K5_9PLAN)

HSP 1 Score: 191 bits (486), Expect = 3.560e-61
Identity = 92/106 (86.79%), Postives = 100/106 (94.34%), Query Frame = 0 
Query:    3 LIMLILLSPLIAYLLYKVKQAQGKCCPSCGTPLIPFQHPASKTIQQWKQGGYRCRNCGCLTDLDAKEIPDGPYPKRRTLLLVLIDLNLLLMISFLSLVFFFLPFLR 108
            LI+L+LLSPLIAY++YK+KQAQGKCCPSCGTPL PFQHP SKTIQQWKQGGYRCRNCGCLTDLDAK+IPDGPYPKRRTLLLVLI LNLLLMISFLSLVFF+  +L 
Sbjct:   14 LILLMLLSPLIAYIIYKIKQAQGKCCPSCGTPLFPFQHPVSKTIQQWKQGGYRCRNCGCLTDLDAKKIPDGPYPKRRTLLLVLIGLNLLLMISFLSLVFFYFHYLN 119
[Close]
BLAST of mRNA_M-pyrifera_M_contig127808.5609.1 vs. uniprot
Match: A0A2E7KG53_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KG53_9PLAN)

HSP 1 Score: 174 bits (441), Expect = 2.580e-54
Identity = 83/108 (76.85%), Postives = 97/108 (89.81%), Query Frame = 0 
Query:    1 MMLIMLILLSPLIAYLLYKVKQAQGKCCPSCGTPLIPFQHPASKTIQQWKQGGYRCRNCGCLTDLDAKEIPDGPYPKRRTLLLVLIDLNLLLMISFLSLVFFFLPFLR 108
            MMLI+L+LLSPLIAY++YK+KQAQGKCCPSCGTPL PFQHP SKTIQQWKQGGYRCRNCGCLTDL+AK+IPDGPYPKR TLLLV+  LNL+ +  FL L+ F+L +L+
Sbjct:   12 MMLILLMLLSPLIAYIIYKIKQAQGKCCPSCGTPLFPFQHPVSKTIQQWKQGGYRCRNCGCLTDLNAKQIPDGPYPKRSTLLLVMGALNLIPLFCFLLLILFYLFYLK 119
[Close]
BLAST of mRNA_M-pyrifera_M_contig127808.5609.1 vs. uniprot
Match: A0A517Q8W0_9PLAN (Uncharacterized protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q8W0_9PLAN)

HSP 1 Score: 160 bits (405), Expect = 7.880e-49
Identity = 77/95 (81.05%), Postives = 85/95 (89.47%), Query Frame = 0 
Query:    3 LIMLILLSPLIAYLLYKVKQAQGKCCPSCGTPLIPFQHPASKTIQQWKQGGYRCRNCGCLTDLDAKEIPDGPYPKRRTLLLVLIDLNLLLMISFL 97
            LIMLIL SPLIAYL YKVKQA+GK CPSCGTPL PFQHPASKT+QQWK+GGYRCRNCGCLTDL+A EIP+G YPKRRTLL+VL  LNL+ M+ FL
Sbjct:   14 LIMLILFSPLIAYLFYKVKQARGKFCPSCGTPLSPFQHPASKTVQQWKEGGYRCRNCGCLTDLNANEIPEGSYPKRRTLLMVLAVLNLIPMLCFL 108
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127808.5609.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A517PQH8_9PLAN1.520e-7199.10Uncharacterized protein n=2 Tax=Gimesia chilikensi... [more]
A0A5A8B9K5_9PLAN3.560e-6186.79Uncharacterized protein n=1 Tax=Gimesia chilikensi... [more]
A0A2E7KG53_9PLAN2.580e-5476.85Uncharacterized protein n=2 Tax=Gimesia TaxID=1649... [more]
A0A517Q8W0_9PLAN7.880e-4981.05Uncharacterized protein n=1 Tax=Gimesia panareensi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..80
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 108..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..107
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.723
NoneNo IPR availableTMHMMTMhelixcoord: 85..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127808contigM-pyrifera_M_contig127808:140..475 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127808.5609.1mRNA_M-pyrifera_M_contig127808.5609.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig127808 140..502 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig127808.5609.1 ID=prot_M-pyrifera_M_contig127808.5609.1|Name=mRNA_M-pyrifera_M_contig127808.5609.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp
MMLIMLILLSPLIAYLLYKVKQAQGKCCPSCGTPLIPFQHPASKTIQQWK
QGGYRCRNCGCLTDLDAKEIPDGPYPKRRTLLLVLIDLNLLLMISFLSLV
FFFLPFLRAFR*
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