prot_M-pyrifera_M_contig127796.5607.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig127796.5607.1
Unique Nameprot_M-pyrifera_M_contig127796.5607.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length50
Homology
BLAST of mRNA_M-pyrifera_M_contig127796.5607.1 vs. uniprot
Match: A0A843X2B5_COLES (Tr-type G domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843X2B5_COLES)

HSP 1 Score: 79.3 bits (194), Expect = 2.090e-17
Identity = 38/47 (80.85%), Postives = 44/47 (93.62%), Query Frame = 0
Query:    4 FSRGLASFTRTKPHVNVGTIGHVDHGKTSLSAAITKVLAEGGTAEAM 50
            FSR +A+FTRTKPHVNVGTIGHVDHGKT+L+AAITKVLAE G A+A+
Sbjct:   61 FSRSMATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAV 107          
BLAST of mRNA_M-pyrifera_M_contig127796.5607.1 vs. uniprot
Match: A0A0A9M8R7_ARUDO (Tr-type G domain-containing protein n=2 Tax=PACMAD clade TaxID=147370 RepID=A0A0A9M8R7_ARUDO)

HSP 1 Score: 77.0 bits (188), Expect = 1.240e-16
Identity = 36/47 (76.60%), Postives = 44/47 (93.62%), Query Frame = 0
Query:    4 FSRGLASFTRTKPHVNVGTIGHVDHGKTSLSAAITKVLAEGGTAEAM 50
            ++R +A+FTRTKPHVNVGTIGHVDHGKT+L+AAITKVLAE G A+A+
Sbjct:   54 WARSMATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAV 100          
BLAST of mRNA_M-pyrifera_M_contig127796.5607.1 vs. uniprot
Match: A0A8J5R1L3_ZIZPA (Tr-type G domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5R1L3_ZIZPA)

HSP 1 Score: 74.3 bits (181), Expect = 3.090e-16
Identity = 35/43 (81.40%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    8 LASFTRTKPHVNVGTIGHVDHGKTSLSAAITKVLAEGGTAEAM 50
            +A+FTRTKPHVNVGTIGHVDHGKT+L+AAITKVLAE G A+A+
Sbjct:    1 MATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAV 43          
BLAST of mRNA_M-pyrifera_M_contig127796.5607.1 vs. uniprot
Match: A0A565C0F1_9BRAS (Elongation factor Tu n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565C0F1_9BRAS)

HSP 1 Score: 79.3 bits (194), Expect = 4.610e-16
Identity = 38/50 (76.00%), Postives = 44/50 (88.00%), Query Frame = 0
Query:    1 GVQFSRGLASFTRTKPHVNVGTIGHVDHGKTSLSAAITKVLAEGGTAEAM 50
            G  F R +A+FTRTKPHVNVGTIGHVDHGKT+L+AAITKVLAE G A+A+
Sbjct:   51 GTSFWRSMATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGNAKAV 100          
BLAST of mRNA_M-pyrifera_M_contig127796.5607.1 vs. uniprot
Match: A0A1D1Y650_9ARAE (Elongation factor Tu (Fragment) n=3 Tax=Araceae TaxID=4454 RepID=A0A1D1Y650_9ARAE)

HSP 1 Score: 79.3 bits (194), Expect = 4.710e-16
Identity = 38/47 (80.85%), Postives = 44/47 (93.62%), Query Frame = 0
Query:    4 FSRGLASFTRTKPHVNVGTIGHVDHGKTSLSAAITKVLAEGGTAEAM 50
            FSR +A+FTRTKPHVNVGTIGHVDHGKT+L+AAITKVLAE G A+A+
Sbjct:   69 FSRSMATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAV 115          
BLAST of mRNA_M-pyrifera_M_contig127796.5607.1 vs. uniprot
Match: A0A1D6LBY9_MAIZE (Elongation factor Tu n=2 Tax=Poaceae TaxID=4479 RepID=A0A1D6LBY9_MAIZE)

HSP 1 Score: 78.6 bits (192), Expect = 6.300e-16
Identity = 37/50 (74.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    1 GVQFSRGLASFTRTKPHVNVGTIGHVDHGKTSLSAAITKVLAEGGTAEAM 50
            G  ++R +A+FTRTKPHVNVGTIGHVDHGKT+L+AAITKVLAE G A+A+
Sbjct:   50 GTLWARSMATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAV 99          
BLAST of mRNA_M-pyrifera_M_contig127796.5607.1 vs. uniprot
Match: B4FH57_MAIZE (Elongation factor Tu n=6 Tax=Poaceae TaxID=4479 RepID=B4FH57_MAIZE)

HSP 1 Score: 78.6 bits (192), Expect = 8.620e-16
Identity = 37/50 (74.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    1 GVQFSRGLASFTRTKPHVNVGTIGHVDHGKTSLSAAITKVLAEGGTAEAM 50
            G  ++R +A+FTRTKPHVNVGTIGHVDHGKT+L+AAITKVLAE G A+A+
Sbjct:   48 GTLWARSMATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAV 97          
BLAST of mRNA_M-pyrifera_M_contig127796.5607.1 vs. uniprot
Match: K4A9U9_SETIT (Elongation factor Tu n=14 Tax=Poaceae TaxID=4479 RepID=K4A9U9_SETIT)

HSP 1 Score: 78.6 bits (192), Expect = 8.640e-16
Identity = 37/50 (74.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    1 GVQFSRGLASFTRTKPHVNVGTIGHVDHGKTSLSAAITKVLAEGGTAEAM 50
            G  ++R +A+FTRTKPHVNVGTIGHVDHGKT+L+AAITKVLAE G A+A+
Sbjct:   49 GTLWARAMATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAI 98          
BLAST of mRNA_M-pyrifera_M_contig127796.5607.1 vs. uniprot
Match: A0A446RD61_TRITD (Tr-type G domain-containing protein n=5 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446RD61_TRITD)

HSP 1 Score: 77.8 bits (190), Expect = 8.980e-16
Identity = 36/47 (76.60%), Postives = 45/47 (95.74%), Query Frame = 0
Query:    4 FSRGLASFTRTKPHVNVGTIGHVDHGKTSLSAAITKVLAEGGTAEAM 50
            ++R +A+FTRTKPHVNVGTIGHVDHGKT+L+AAITKVLAE G+A+A+
Sbjct:   53 WARSMATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGSAKAV 99          
BLAST of mRNA_M-pyrifera_M_contig127796.5607.1 vs. uniprot
Match: I1GKU6_BRADI (Elongation factor Tu n=43 Tax=Poaceae TaxID=4479 RepID=I1GKU6_BRADI)

HSP 1 Score: 78.2 bits (191), Expect = 1.190e-15
Identity = 37/50 (74.00%), Postives = 46/50 (92.00%), Query Frame = 0
Query:    1 GVQFSRGLASFTRTKPHVNVGTIGHVDHGKTSLSAAITKVLAEGGTAEAM 50
            G  ++R +A+FTRTKPHVNVGTIGHVDHGKT+L+AAITKVLAE G+A+A+
Sbjct:   52 GGLWARSMATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGSAKAV 101          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127796.5607.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A843X2B5_COLES2.090e-1780.85Tr-type G domain-containing protein n=1 Tax=Coloca... [more]
A0A0A9M8R7_ARUDO1.240e-1676.60Tr-type G domain-containing protein n=2 Tax=PACMAD... [more]
A0A8J5R1L3_ZIZPA3.090e-1681.40Tr-type G domain-containing protein n=1 Tax=Zizani... [more]
A0A565C0F1_9BRAS4.610e-1676.00Elongation factor Tu n=1 Tax=Arabis nemorensis Tax... [more]
A0A1D1Y650_9ARAE4.710e-1680.85Elongation factor Tu (Fragment) n=3 Tax=Araceae Ta... [more]
A0A1D6LBY9_MAIZE6.300e-1674.00Elongation factor Tu n=2 Tax=Poaceae TaxID=4479 Re... [more]
B4FH57_MAIZE8.620e-1674.00Elongation factor Tu n=6 Tax=Poaceae TaxID=4479 Re... [more]
K4A9U9_SETIT8.640e-1674.00Elongation factor Tu n=14 Tax=Poaceae TaxID=4479 R... [more]
A0A446RD61_TRITD8.980e-1676.60Tr-type G domain-containing protein n=5 Tax=Tritic... [more]
I1GKU6_BRADI1.190e-1574.00Elongation factor Tu n=43 Tax=Poaceae TaxID=4479 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 5..50
e-value: 7.2E-9
score: 37.2
NoneNo IPR availablePANTHERPTHR43721FAMILY NOT NAMEDcoord: 4..49
NoneNo IPR availablePANTHERPTHR43721:SF23coord: 4..49
IPR000795Transcription factor, GTP-binding domainPFAMPF00009GTP_EFTUcoord: 15..42
e-value: 1.7E-7
score: 30.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127796contigM-pyrifera_M_contig127796:1..150 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127796.5607.1mRNA_M-pyrifera_M_contig127796.5607.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig127796 1..150 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig127796.5607.1 ID=prot_M-pyrifera_M_contig127796.5607.1|Name=mRNA_M-pyrifera_M_contig127796.5607.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=50bp
GVQFSRGLASFTRTKPHVNVGTIGHVDHGKTSLSAAITKVLAEGGTAEAM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000795TF_GTP-bd_dom
IPR027417P-loop_NTPase