prot_M-pyrifera_M_contig127676.5569.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig127676.5569.1
Unique Nameprot_M-pyrifera_M_contig127676.5569.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length53
Homology
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BLAST of mRNA_M-pyrifera_M_contig127676.5569.1 vs. uniprot
Match: L8HFK8_ACACA (WD repeatcontaining protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HFK8_ACACA)

HSP 1 Score: 58.2 bits (139), Expect = 1.620e-8
Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 0 
Query:    1 MWIHAGAVLEMLPLTPYSFATAGADGMVVIWKDGRVQSEMRNNYACACLLDKL 53
            MW H+ AV +M+ L+  +  + GADG+V++WKDGR Q+E+RN  A   L+  L
Sbjct:  310 MWGHSDAVYDMVALSDSALCSCGADGLVILWKDGREQTEIRNQMAAISLMQNL 362
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127676.5569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
L8HFK8_ACACA1.620e-845.28WD repeatcontaining protein n=1 Tax=Acanthamoeba c... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127676contigM-pyrifera_M_contig127676:166..324 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127676.5569.1mRNA_M-pyrifera_M_contig127676.5569.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig127676 166..336 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig127676.5569.1 ID=prot_M-pyrifera_M_contig127676.5569.1|Name=mRNA_M-pyrifera_M_contig127676.5569.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=53bp
MWIHAGAVLEMLPLTPYSFATAGADGMVVIWKDGRVQSEMRNNYACACLL
DKL
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