prot_M-pyrifera_M_contig127595.5566.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig127595.5566.1
Unique Nameprot_M-pyrifera_M_contig127595.5566.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length139
Homology
BLAST of mRNA_M-pyrifera_M_contig127595.5566.1 vs. uniprot
Match: A0A7S1C3I7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3I7_9STRA)

HSP 1 Score: 157 bits (397), Expect = 3.680e-43
Identity = 78/146 (53.42%), Postives = 109/146 (74.66%), Query Frame = 0
Query:    3 VDYRISSDIRTPFRVFPYVEEATTSAFRADFVLKIRCDIPARSYGTNVVIRFPVPKAATSVTPEVGV---AVGSSAATG-------QVAEFDAKKRQVTWVIRKFKGGTEETLRCKINLGSAATGSIRKELGPVTMTFEIPMHSTS 138
            ++YRI+SD R PFRVFP+VEE  TS ++ + VLK+R DIPA SYG NV++RFPVP+ + +VTPE+G    AVG++AA G       + AE+  K ++V W+I+KF+GGTE TLR KI L + +T SIRKE+GP+++ FEIPM++ S
Sbjct:  316 MNYRITSDFRAPFRVFPFVEE--TSPYKVELVLKVRADIPASSYGANVLVRFPVPRTSATVTPEIGPSSQAVGTAAAGGADAGGSAEQAEYRGKDKEVLWLIKKFQGGTEHTLRTKITLSAPSTTSIRKEIGPISLNFEIPMYNVS 459          
BLAST of mRNA_M-pyrifera_M_contig127595.5566.1 vs. uniprot
Match: A0A813BRS3_9DINO (AP4M protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BRS3_9DINO)

HSP 1 Score: 146 bits (368), Expect = 4.300e-39
Identity = 76/153 (49.67%), Postives = 103/153 (67.32%), Query Frame = 0
Query:    3 VDYRISSDIRTPFRVFPYVEEATTSAFRADFVLKIRCDIPARSYGTNVVIRFPVPKAATSVTPEVGVAVGSS-----------------AATGQVAEFDAKKRQVTWVIRKFKGGTEETLRCKINLGSAATGSIRKELGPVTMTFEIPMHSTS 138
            ++YR++SD R PFRV P VEE   SA + + VLK+R DIP+R+YG NV +RFP P+AATSV P +  A G+                  AA GQVAE+ AK+++V W I+K +GGTE TLR KI+L   + GS RKELGP+T++FE+PM++ S
Sbjct:  300 MNYRMTSDFRAPFRVTPIVEEV--SATKLELVLKVRADIPSRNYGANVTVRFPTPRAATSVKPVLAPATGTKTSSXXXXXXXXXXXXXXAAGGQVAEYLAKEKEVAWQIKKLQGGTEATLRTKISLPHGSGGSARKELGPITLSFEVPMYNVS 450          
BLAST of mRNA_M-pyrifera_M_contig127595.5566.1 vs. uniprot
Match: A0A6A7GCG2_9CRUS (AP-4 complex subunit mu-1 n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GCG2_9CRUS)

HSP 1 Score: 140 bits (353), Expect = 4.460e-37
Identity = 65/139 (46.76%), Postives = 99/139 (71.22%), Query Frame = 0
Query:    1 TAVDYRISSDIRTPFRVFPYVEEATTSAFRADFVLKIRCDIPARSYGTNVVIRFPVPKAATSVTPEVGVAVGSSAATGQVAEFDAKKRQVTWVIRKFKGGTEETLRCKINLGSAATGSIRKELGPVTMTFEIPMHSTSG 139
            + ++YR++ + R PFR+FP+ E  T   ++ + ++KIR D+P ++YG NV+++FPVPKA TSV+ ++G+        GQ +E+ A  ++V W I+KF GGTE+TLR KI LGS  T  +RKE+GP++MTFEIPM + SG
Sbjct:  281 SVLNYRVTGEFRAPFRIFPFFELVTP--YKIELIIKIRADVPEQNYGGNVLVQFPVPKATTSVSCDLGLGT-----IGQASEYSAVDKKVFWKIKKFGGGTEQTLRVKITLGSQHTTIVRKEIGPISMTFEIPMFNASG 412          
BLAST of mRNA_M-pyrifera_M_contig127595.5566.1 vs. uniprot
Match: H3G935_PHYRM (MHD domain-containing protein n=34 Tax=Oomycota TaxID=4762 RepID=H3G935_PHYRM)

HSP 1 Score: 138 bits (347), Expect = 3.380e-36
Identity = 66/138 (47.83%), Postives = 98/138 (71.01%), Query Frame = 0
Query:    1 TAVDYRISSDIRTPFRVFPYVEEATTSAFRADFVLKIRCDIPARSYGTNVVIRFPVPKAATSVTPEVGVAVGSSAATGQVAEFDAKKRQVTWVIRKFKGGTEETLRCKINLGSAATGSIRKELGPVTMTFEIPMHSTS 138
            T ++YRI+ D R PFR+FP+VEE + +  + + VLKIR D+P  +YG NV+IRFPVP++  +V+ ++G      ++ GQ+AE+   + QV W I++F GGTE TLR KI LG  +   +R+E+GPV+M FEIPM++TS
Sbjct:  281 TVINYRITGDFRAPFRIFPFVEELSPT--KVEMVLKIRADMPENNYGANVIIRFPVPQSTVAVSCDIG-----KSSAGQLAEYRENENQVRWAIKRFTGGTELTLRAKITLGQPSP-HVRREIGPVSMNFEIPMYNTS 410          
BLAST of mRNA_M-pyrifera_M_contig127595.5566.1 vs. uniprot
Match: A0A2D4BYY1_PYTIN (MHD domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYY1_PYTIN)

HSP 1 Score: 140 bits (353), Expect = 5.350e-36
Identity = 68/139 (48.92%), Postives = 98/139 (70.50%), Query Frame = 0
Query:    1 TAVDYRISSDIRTPFRVFPYVEEATTSAFRADFVLKIRCDIPARSYGTNVVIRFPVPKAATSVTPEVGVAVGSSAATGQVAEFDAKKRQVTWVIRKFKGGTEETLRCKINLGSAATGSIRKELGPVTMTFEIPMHSTSG 139
            T ++YRI+ D R PFR+FP+VEE + +  + + +LK+R ++P  +YG NV+IRFPVP+A  +V+ ++G       A GQ+AE+   + QV W I++F GGTE TLR KI L S  +  +R+E+GPV+M FEIPMHSTSG
Sbjct:  596 TVINYRITXDFRAPFRIFPFVEEQSPT--KIEMLLKVRAEMPENNYGANVIIRFPVPQATVAVSXDIG-----KNAAGQLAEYRENENQVRWAIKRFTGGTELTLRAKITL-SQPSPHVRREIGPVSMNFEIPMHSTSG 726          
BLAST of mRNA_M-pyrifera_M_contig127595.5566.1 vs. uniprot
Match: A0A7S0D2M7_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D2M7_9EUKA)

HSP 1 Score: 136 bits (343), Expect = 1.670e-35
Identity = 64/136 (47.06%), Postives = 97/136 (71.32%), Query Frame = 0
Query:    3 VDYRISSDIRTPFRVFPYVEEATTSAFRADFVLKIRCDIPARSYGTNVVIRFPVPKAATSVTPEVGVAVGSSAATGQVAEFDAKKRQVTWVIRKFKGGTEETLRCKINLGSAATGSIRKELGPVTMTFEIPMHSTS 138
            ++YRI+SD R PFR+FP+ E   +S ++ + ++KIR DIP  + GTN+V++FPVPK+ +SV+ + G+ V      GQ  E+D+KK+ V W I+K  GGTE TLR KI L  A T S++KE+GP++M FE+P+++ S
Sbjct:  300 MNYRITSDFRIPFRIFPFFE--LSSPYKVELIVKIRADIPETNGGTNIVVQFPVPKSTSSVSSQTGIGV-----QGQNTEYDSKKQMVLWRIKKMLGGTEHTLRSKIVLTKAHTNSVKKEIGPISMQFEVPLYNPS 428          
BLAST of mRNA_M-pyrifera_M_contig127595.5566.1 vs. uniprot
Match: A0A5A8EE88_CAFRO (MHD domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EE88_CAFRO)

HSP 1 Score: 134 bits (336), Expect = 1.710e-34
Identity = 70/162 (43.21%), Postives = 99/162 (61.11%), Query Frame = 0
Query:    3 VDYRISSDIRTPFRVFPYVEEATTSAFRADFVLKIRCDIPARSYGTNVVIRFPVPKAATSVTPEVGVAVGS-------------------------SAATGQVAEFDAKKRQVTWVIRKFKGGTEETLRCKINLGSAATGSIRKELGPVTMTFEIPMHSTSG 139
            ++YR+S D R PFRV P++EE   S ++ +F LKIR DIP ++YGT+V+++F VP+AAT+V P V  A                            +A   Q+AEFD+K R+V W I+KF+GG E TL+  I L S + GS RKE+GP+ + FEIPM++ SG
Sbjct:  272 MNYRMSCDFRAPFRVLPHIEEV--SPYKLEFTLKIRADIPPKNYGTHVIVKFGVPRAATAVVPTVEAAXXXXXXXXGGIRAXXXXXXXXXXXXXXXAAERLQIAEFDSKAREVVWSIKKFQGGREVTLKTSITLSSPSAGSARKEVGPIGVDFEIPMYNVSG 431          
BLAST of mRNA_M-pyrifera_M_contig127595.5566.1 vs. uniprot
Match: A0A6G0X4R8_9STRA (MHD domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0X4R8_9STRA)

HSP 1 Score: 132 bits (332), Expect = 4.720e-34
Identity = 66/138 (47.83%), Postives = 93/138 (67.39%), Query Frame = 0
Query:    1 TAVDYRISSDIRTPFRVFPYVEEATTSAFRADFVLKIRCDIPARSYGTNVVIRFPVPKAATSVTPEVGVAVGSSAATGQVAEFDAKKRQVTWVIRKFKGGTEETLRCKINLGSAATGSIRKELGPVTMTFEIPMHSTS 138
            T ++YRI+ + R PFR+FP+VEE  TS  + + VLKIR D+P  +YG NV+IRFPVP    +V+ ++G         GQ+AEF   + QV W I++F GG+E TLR KI L   +T  +R+E+GPV+M FEIPM++ S
Sbjct:  276 TVINYRITGEFRAPFRIFPFVEE--TSPTKIEMVLKIRADMPDNNYGANVIIRFPVPHNTIAVSCDIG-----KNTAGQLAEFRENENQVRWAIKRFTGGSEMTLRAKITLSGPST-HVRREIGPVSMNFEIPMYNVS 405          
BLAST of mRNA_M-pyrifera_M_contig127595.5566.1 vs. uniprot
Match: A0A7S2UX12_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX12_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.250e-33
Identity = 63/136 (46.32%), Postives = 91/136 (66.91%), Query Frame = 0
Query:    3 VDYRISSDIRTPFRVFPYVEEATTSAFRADFVLKIRCDIPARSYGTNVVIRFPVPKAATSVTPEVGVAVGSSAATGQVAEFDAKKRQVTWVIRKFKGGTEETLRCKINLGSAATGSIRKELGPVTMTFEIPMHSTS 138
            ++YR++S+ RTPFR+FP +EE   S ++ + VL +R DIP  +YG NV +  PVP+ A S T E+G  V      GQ  E+D  +R++ W I+KF GGTE+ LR KI L SA   + R+E+GP++M FEIPM++ S
Sbjct:  302 LNYRVTSEFRTPFRLFPAIEEV--SPYKLELVLMVRADIPESNYGANVTVTIPVPRTAASATGEMGENV-----VGQSCEYDQGERKLVWTIKKFPGGTEQGLRAKITLASATAPAARREIGPISMGFEIPMYNVS 430          
BLAST of mRNA_M-pyrifera_M_contig127595.5566.1 vs. uniprot
Match: A0A067CRN5_SAPPC (MHD domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CRN5_SAPPC)

HSP 1 Score: 129 bits (324), Expect = 6.790e-33
Identity = 63/138 (45.65%), Postives = 93/138 (67.39%), Query Frame = 0
Query:    1 TAVDYRISSDIRTPFRVFPYVEEATTSAFRADFVLKIRCDIPARSYGTNVVIRFPVPKAATSVTPEVGVAVGSSAATGQVAEFDAKKRQVTWVIRKFKGGTEETLRCKINLGSAATGSIRKELGPVTMTFEIPMHSTS 138
            T ++YRI+ D R PFR+FP+VEE + +  + + +LK+R D+P  +YG NV+IRFPVP+   SV+ ++G         GQ+AEF   + QV W I++F G +E TLR KI L S  +  +R+E+GPV+M FEIPM++ S
Sbjct:  276 TVINYRITGDFRAPFRIFPFVEEQSPT--KIEMILKVRADMPDNNYGANVIIRFPVPQNTVSVSCDIG-----KNTAGQLAEFRENENQVRWAIKRFAGASELTLRAKITL-SGPSQHVRREIGPVSMNFEIPMYNVS 405          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127595.5566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1C3I7_9STRA3.680e-4353.42Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A813BRS3_9DINO4.300e-3949.67AP4M protein (Fragment) n=1 Tax=Symbiodinium sp. K... [more]
A0A6A7GCG2_9CRUS4.460e-3746.76AP-4 complex subunit mu-1 n=1 Tax=Hirondellea giga... [more]
H3G935_PHYRM3.380e-3647.83MHD domain-containing protein n=34 Tax=Oomycota Ta... [more]
A0A2D4BYY1_PYTIN5.350e-3648.92MHD domain-containing protein n=1 Tax=Pythium insi... [more]
A0A7S0D2M7_9EUKA1.670e-3547.06Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A5A8EE88_CAFRO1.710e-3443.21MHD domain-containing protein n=1 Tax=Cafeteria ro... [more]
A0A6G0X4R8_9STRA4.720e-3447.83MHD domain-containing protein n=2 Tax=Aphanomyces ... [more]
A0A7S2UX12_9STRA1.250e-3346.32Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A067CRN5_SAPPC6.790e-3345.65MHD domain-containing protein n=4 Tax=Saprolegniac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028565Mu homology domainPFAMPF00928Adap_comp_subcoord: 3..139
e-value: 6.0E-15
score: 55.3
IPR028565Mu homology domainPROSITEPS51072MHDcoord: 1..139
score: 14.474
NoneNo IPR availableGENE3D2.60.40.1170coord: 13..131
e-value: 3.5E-26
score: 94.3
NoneNo IPR availableGENE3D2.60.40.1170coord: 3..139
e-value: 3.5E-26
score: 94.3
NoneNo IPR availablePANTHERPTHR10529:SF270AP-4 COMPLEX SUBUNIT MU-1coord: 4..139
NoneNo IPR availablePANTHERPTHR10529LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDcoord: 4..139
IPR036168AP-2 complex subunit mu, C-terminal superfamilySUPERFAMILY49447Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptorcoord: 4..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127595contigM-pyrifera_M_contig127595:1..480 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127595.5566.1mRNA_M-pyrifera_M_contig127595.5566.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig127595 1..480 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig127595.5566.1 ID=prot_M-pyrifera_M_contig127595.5566.1|Name=mRNA_M-pyrifera_M_contig127595.5566.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp
TAVDYRISSDIRTPFRVFPYVEEATTSAFRADFVLKIRCDIPARSYGTNV
VIRFPVPKAATSVTPEVGVAVGSSAATGQVAEFDAKKRQVTWVIRKFKGG
TEETLRCKINLGSAATGSIRKELGPVTMTFEIPMHSTSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028565MHD
IPR036168AP2_Mu_C_sf