prot_M-pyrifera_M_contig127483.5536.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig127483.5536.1
Unique Nameprot_M-pyrifera_M_contig127483.5536.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length140
Homology
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BLAST of mRNA_M-pyrifera_M_contig127483.5536.1 vs. uniprot
Match: V9ZAH7_9MAGN (Ribosomal protein S2 (Fragment) n=2 Tax=Pentapetalae TaxID=1437201 RepID=V9ZAH7_9MAGN)

HSP 1 Score: 277 bits (708), Expect = 7.920e-94
Identity = 133/140 (95.00%), Postives = 136/140 (97.14%), Query Frame = 0 
Query:    1 MTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAAIKARCHYVNKKWLGGMLTNWYTTETRLHKFRDLRTEQKTGRINRLPKRDAAV 140
            MTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHI NLTRTARFLSEACDLVFDAASRGK+FLIVGTKNKAADSVARAAIKARCHYVNKKWLGGM TNW TTETRLHKFRDLRTEQKTG +NRLPKRDAA+
Sbjct:    1 MTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKRFLIVGTKNKAADSVARAAIKARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRTEQKTGGLNRLPKRDAAM 140
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BLAST of mRNA_M-pyrifera_M_contig127483.5536.1 vs. uniprot
Match: A0A5D2G2Q9_GOSDA (Uncharacterized protein (Fragment) n=2 Tax=rosids TaxID=71275 RepID=A0A5D2G2Q9_GOSDA)

HSP 1 Score: 275 bits (703), Expect = 2.650e-93
Identity = 131/140 (93.57%), Postives = 136/140 (97.14%), Query Frame = 0 
Query:    1 MTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAAIKARCHYVNKKWLGGMLTNWYTTETRLHKFRDLRTEQKTGRINRLPKRDAAV 140
            M RRYWNINLEEM+EAGVHFGHGTRKWNPRMAPYISAKRKGIHI NLTRTARFLSEACDLVFDAAS+GKQFLIVGTKNKAADSVARAAI+ARCHYVNKKWLGGMLTNW TTETRLHKFRDLRTEQKTG +NRLPKRDAA+
Sbjct:    1 MARRYWNINLEEMLEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASKGKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWPTTETRLHKFRDLRTEQKTGGLNRLPKRDAAM 140
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BLAST of mRNA_M-pyrifera_M_contig127483.5536.1 vs. uniprot
Match: A0A411DA88_9ERIC (30S ribosomal protein S2, chloroplastic n=37 Tax=asterids TaxID=71274 RepID=A0A411DA88_9ERIC)

HSP 1 Score: 275 bits (704), Expect = 3.040e-92
Identity = 132/140 (94.29%), Postives = 135/140 (96.43%), Query Frame = 0 
Query:    1 MTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAAIKARCHYVNKKWLGGMLTNWYTTETRLHKFRDLRTEQKTGRINRLPKRDAAV 140
            MTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHI NLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAAI+ARCHYVNKKWLGGMLTNW TTETRLH FRDLR EQK GR+NRLPKRDAA+
Sbjct:    1 MTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHTFRDLRMEQKMGRLNRLPKRDAAM 140
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BLAST of mRNA_M-pyrifera_M_contig127483.5536.1 vs. uniprot
Match: RR2_GOSBA (30S ribosomal protein S2, chloroplastic n=46 Tax=cellular organisms TaxID=131567 RepID=RR2_GOSBA)

HSP 1 Score: 275 bits (703), Expect = 4.320e-92
Identity = 131/140 (93.57%), Postives = 136/140 (97.14%), Query Frame = 0 
Query:    1 MTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAAIKARCHYVNKKWLGGMLTNWYTTETRLHKFRDLRTEQKTGRINRLPKRDAAV 140
            M RRYWNINLEEM+EAGVHFGHGTRKWNPRMAPYISAKRKGIHI NLTRTARFLSEACDLVFDAAS+GKQFLIVGTKNKAADSVARAAI+ARCHYVNKKWLGGMLTNW TTETRLHKFRDLRTEQKTG +NRLPKRDAA+
Sbjct:    1 MARRYWNINLEEMLEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASKGKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWPTTETRLHKFRDLRTEQKTGGLNRLPKRDAAM 140
[Close]
BLAST of mRNA_M-pyrifera_M_contig127483.5536.1 vs. uniprot
Match: A0A109UTJ3_PACTE (30S ribosomal protein S2, chloroplastic n=82 Tax=Mesangiospermae TaxID=1437183 RepID=A0A109UTJ3_PACTE)

HSP 1 Score: 275 bits (702), Expect = 6.140e-92
Identity = 131/140 (93.57%), Postives = 135/140 (96.43%), Query Frame = 0 
Query:    1 MTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAAIKARCHYVNKKWLGGMLTNWYTTETRLHKFRDLRTEQKTGRINRLPKRDAAV 140
            MTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHI NLTRTARFLSEACDL+FDAASRGKQFLIVGTKNKAADSVA AAI+ARCHYVNKKWLGGMLTNW T ETRLHKFRDLR EQKTGR+NRLPKRDAA+
Sbjct:    1 MTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLLFDAASRGKQFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTIETRLHKFRDLRAEQKTGRLNRLPKRDAAM 140
[Close]
BLAST of mRNA_M-pyrifera_M_contig127483.5536.1 vs. uniprot
Match: A0A7D0LA41_OLEEU (30S ribosomal protein S2, chloroplastic n=92 Tax=Lamiales TaxID=4143 RepID=A0A7D0LA41_OLEEU)

HSP 1 Score: 275 bits (703), Expect = 2.060e-91
Identity = 132/140 (94.29%), Postives = 135/140 (96.43%), Query Frame = 0 
Query:    1 MTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAAIKARCHYVNKKWLGGMLTNWYTTETRLHKFRDLRTEQKTGRINRLPKRDAAV 140
            MTRRYWNINLEEMMEAGVHFGHG RKWNP+MAPYISAKRKGIHI NLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVA AAIKARCHYVNKKWLGGMLTNW TTETRLHKFRDLR EQKTGR+NRLPKRDAA+
Sbjct:   48 MTRRYWNINLEEMMEAGVHFGHGARKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVAWAAIKARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKRDAAM 187
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BLAST of mRNA_M-pyrifera_M_contig127483.5536.1 vs. uniprot
Match: A0A7L7TEC4_9GENT (30S ribosomal protein S2, chloroplastic n=2 Tax=lamiids TaxID=91888 RepID=A0A7L7TEC4_9GENT)

HSP 1 Score: 274 bits (701), Expect = 2.890e-91
Identity = 131/140 (93.57%), Postives = 135/140 (96.43%), Query Frame = 0 
Query:    1 MTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAAIKARCHYVNKKWLGGMLTNWYTTETRLHKFRDLRTEQKTGRINRLPKRDAAV 140
            MTRRYWNINLEEMMEAGVHFGHGTRKWNP+MAPYISAKRKGIHI NLTRTARFLSEACDLVFDA SRGKQFLIVGTKNKAADSVA AAI+ARCHYVNKKWLGGMLTNW TTETRLHKFRDLR EQKTGR+NRLPKRDAA+
Sbjct:   37 MTRRYWNINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAGSRGKQFLIVGTKNKAADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKRDAAM 176
[Close]
BLAST of mRNA_M-pyrifera_M_contig127483.5536.1 vs. uniprot
Match: W5TZJ8_9LAMI (30S ribosomal protein S2, chloroplastic n=25 Tax=Lamiales TaxID=4143 RepID=W5TZJ8_9LAMI)

HSP 1 Score: 273 bits (697), Expect = 3.540e-91
Identity = 131/140 (93.57%), Postives = 135/140 (96.43%), Query Frame = 0 
Query:    1 MTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAAIKARCHYVNKKWLGGMLTNWYTTETRLHKFRDLRTEQKTGRINRLPKRDAAV 140
            MTRRYWNINLEE++EAGVHFGHGTRKWNP+MAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSV  AAIKARCH VNKKWLGGMLTNW TTETRLHKFRDLR EQKTGR+NRLPKRDAAV
Sbjct:    1 MTRRYWNINLEELLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKRDAAV 140
[Close]
BLAST of mRNA_M-pyrifera_M_contig127483.5536.1 vs. uniprot
Match: RR2_COFAR (30S ribosomal protein S2, chloroplastic n=150 Tax=Pentapetalae TaxID=1437201 RepID=RR2_COFAR)

HSP 1 Score: 272 bits (696), Expect = 5.020e-91
Identity = 130/140 (92.86%), Postives = 134/140 (95.71%), Query Frame = 0 
Query:    1 MTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAAIKARCHYVNKKWLGGMLTNWYTTETRLHKFRDLRTEQKTGRINRLPKRDAAV 140
            MTRRYWNINLEEMMEAGVHFGHGTRKWNP+M PYISAKRKGIHI NLTRTARFLSEACDLVFDA SRGKQFLIVGTKNKAADSVA AAI+ARCHYVNKKWLGGMLTNW TTETRLHKFRDLR EQKTGR+NRLPKRDAA+
Sbjct:    1 MTRRYWNINLEEMMEAGVHFGHGTRKWNPKMEPYISAKRKGIHITNLTRTARFLSEACDLVFDAGSRGKQFLIVGTKNKAADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKRDAAM 140
[Close]
BLAST of mRNA_M-pyrifera_M_contig127483.5536.1 vs. uniprot
Match: A0A140IEX2_PANGI (Ribosomal protein S2 (Fragment) n=1 Tax=Panax ginseng TaxID=4054 RepID=A0A140IEX2_PANGI)

HSP 1 Score: 269 bits (687), Expect = 9.930e-91
Identity = 128/140 (91.43%), Postives = 135/140 (96.43%), Query Frame = 0 
Query:    1 MTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAAIKARCHYVNKKWLGGMLTNWYTTETRLHKFRDLRTEQKTGRINRLPKRDAAV 140
            MT+RYWNINLEEMM+AGVHFGHGT+KWNP+MAPYISAKRKGIHI NLTRTARFL EACDLVFDAASRGKQFLIVGTKNKAA+ VA AAIKARCHYVNKKWLGGMLTNW TTETRLHKFRDLRTEQKTGR+NRLPKRDAA+
Sbjct:    1 MTKRYWNINLEEMMKAGVHFGHGTKKWNPKMAPYISAKRKGIHITNLTRTARFLLEACDLVFDAASRGKQFLIVGTKNKAANLVAWAAIKARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGRLNRLPKRDAAM 140
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127483.5536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
V9ZAH7_9MAGN7.920e-9495.00Ribosomal protein S2 (Fragment) n=2 Tax=Pentapetal... [more]
A0A5D2G2Q9_GOSDA2.650e-9393.57Uncharacterized protein (Fragment) n=2 Tax=rosids ... [more]
A0A411DA88_9ERIC3.040e-9294.2930S ribosomal protein S2, chloroplastic n=37 Tax=a... [more]
RR2_GOSBA4.320e-9293.5730S ribosomal protein S2, chloroplastic n=46 Tax=c... [more]
A0A109UTJ3_PACTE6.140e-9293.5730S ribosomal protein S2, chloroplastic n=82 Tax=M... [more]
A0A7D0LA41_OLEEU2.060e-9194.2930S ribosomal protein S2, chloroplastic n=92 Tax=L... [more]
A0A7L7TEC4_9GENT2.890e-9193.5730S ribosomal protein S2, chloroplastic n=2 Tax=la... [more]
W5TZJ8_9LAMI3.540e-9193.5730S ribosomal protein S2, chloroplastic n=25 Tax=L... [more]
RR2_COFAR5.020e-9192.8630S ribosomal protein S2, chloroplastic n=150 Tax=... [more]
A0A140IEX2_PANGI9.930e-9191.43Ribosomal protein S2 (Fragment) n=1 Tax=Panax gins... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001865Ribosomal protein S2PRINTSPR00395RIBOSOMALS2coord: 10..28
score: 46.72
coord: 91..108
score: 46.92
coord: 41..50
score: 61.69
IPR001865Ribosomal protein S2PFAMPF00318Ribosomal_S2coord: 13..137
e-value: 1.5E-43
score: 148.5
NoneNo IPR availableGENE3D3.40.50.10490coord: 4..123
e-value: 8.5E-38
score: 131.3
NoneNo IPR availablePANTHERPTHR12534:SF028S RIBOSOMAL PROTEIN S2, MITOCHONDRIALcoord: 2..129
IPR005706Ribosomal protein S2, bacteria/mitochondria/plastidTIGRFAMTIGR01011TIGR01011coord: 8..138
e-value: 7.7E-44
score: 147.6
IPR005706Ribosomal protein S2, bacteria/mitochondria/plastidPANTHERPTHR1253430S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLARcoord: 2..129
IPR005706Ribosomal protein S2, bacteria/mitochondria/plastidHAMAPMF_00291_BRibosomal_S2_Bcoord: 6..140
score: 13.445
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00962RIBOSOMAL_S2_1coord: 10..21
IPR023591Ribosomal protein S2, flavodoxin-like domain superfamilySUPERFAMILY52313Ribosomal protein S2coord: 10..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127483contigM-pyrifera_M_contig127483:2..421 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127483.5536.1mRNA_M-pyrifera_M_contig127483.5536.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig127483 2..433 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig127483.5536.1 ID=prot_M-pyrifera_M_contig127483.5536.1|Name=mRNA_M-pyrifera_M_contig127483.5536.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=140bp
MTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRT
ARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAAIKARCHYVNKKW
LGGMLTNWYTTETRLHKFRDLRTEQKTGRINRLPKRDAAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001865Ribosomal_S2
IPR005706Ribosomal_S2_bac/mit/plastid
IPR018130Ribosomal_S2_CS
IPR023591Ribosomal_S2_flav_dom_sf