prot_M-pyrifera_M_contig127324.5502.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig127324.5502.1
Unique Nameprot_M-pyrifera_M_contig127324.5502.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length84
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig127324.5502.1 vs. uniprot
Match: F0SNL4_RUBBR (Uncharacterized protein n=1 Tax=Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / IAM 15109 / NBRC 103401 / IFAM 1448) TaxID=756272 RepID=F0SNL4_RUBBR)

HSP 1 Score: 56.6 bits (135), Expect = 1.150e-7
Identity = 29/75 (38.67%), Postives = 40/75 (53.33%), Query Frame = 0 
Query:    1 EAQARTETTAAVSHGEGIITNDAKQQGKQVEVIWRIDPMSNVCPICQRMNGKLEEYWSKFFPLGPPAHPRCACDL 75
            EA + T TT A + G G + +D     K  +  W+ +  S VCPIC  +N    + W   FP+GPPAHP C C +
Sbjct:  147 EAISVTATTEARAAG-GEVVSDLVGT-KSPDDYWQTEEDSRVCPICSPLNDAKRDVWEAKFPMGPPAHPHCRCQI 219
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127324.5502.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
F0SNL4_RUBBR1.150e-738.67Uncharacterized protein n=1 Tax=Rubinisphaera bras... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127324contigM-pyrifera_M_contig127324:222..473 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127324.5502.1mRNA_M-pyrifera_M_contig127324.5502.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig127324 222..473 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig127324.5502.1 ID=prot_M-pyrifera_M_contig127324.5502.1|Name=mRNA_M-pyrifera_M_contig127324.5502.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=84bp
EAQARTETTAAVSHGEGIITNDAKQQGKQVEVIWRIDPMSNVCPICQRMN
GKLEEYWSKFFPLGPPAHPRCACDLEVRIDGIVA
back to top