prot_M-pyrifera_M_contig127318.5500.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig127318.5500.1
Unique Nameprot_M-pyrifera_M_contig127318.5500.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length50
Homology
BLAST of mRNA_M-pyrifera_M_contig127318.5500.1 vs. uniprot
Match: D1J767_ECTSI (50S ribosomal protein L19, chloroplastic n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J767_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 4.380e-21
Identity = 47/49 (95.92%), Postives = 47/49 (95.92%), Query Frame = 0
Query:    1 GIERAFLVNSPKLASIETLKSARVRKSKLYYLRNIIGKAGRLKQRVNKK 49
            GIERAFLVNSPKLASIE LKSARVRKSKLYYLRNIIGKAGRLKQRV KK
Sbjct:   82 GIERAFLVNSPKLASIEILKSARVRKSKLYYLRNIIGKAGRLKQRVKKK 130          
BLAST of mRNA_M-pyrifera_M_contig127318.5500.1 vs. uniprot
Match: A0A6B7EVN0_9PHAE (50S ribosomal protein L19 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EVN0_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 2.890e-19
Identity = 43/49 (87.76%), Postives = 45/49 (91.84%), Query Frame = 0
Query:    1 GIERAFLVNSPKLASIETLKSARVRKSKLYYLRNIIGKAGRLKQRVNKK 49
            G+ERAFLVNSPK ASIE LKS+RV KSKLYYLRNIIGKAGRLKQR NKK
Sbjct:   82 GVERAFLVNSPKFASIEVLKSSRVSKSKLYYLRNIIGKAGRLKQRFNKK 130          
BLAST of mRNA_M-pyrifera_M_contig127318.5500.1 vs. uniprot
Match: A0A1I9LVW4_9PHAE (50S ribosomal protein L19, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVW4_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 8.150e-18
Identity = 39/49 (79.59%), Postives = 45/49 (91.84%), Query Frame = 0
Query:    1 GIERAFLVNSPKLASIETLKSARVRKSKLYYLRNIIGKAGRLKQRVNKK 49
            G+ERAFLVNSPK ASIE +KS+R+R+SKLYYLRNIIGKAGRLK+R  KK
Sbjct:   90 GVERAFLVNSPKFASIEVIKSSRIRRSKLYYLRNIIGKAGRLKERFKKK 138          
BLAST of mRNA_M-pyrifera_M_contig127318.5500.1 vs. uniprot
Match: A0A7T8JK70_SCYLO (50S ribosomal protein L19, chloroplastic n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A7T8JK70_SCYLO)

HSP 1 Score: 77.0 bits (188), Expect = 1.180e-16
Identity = 40/49 (81.63%), Postives = 42/49 (85.71%), Query Frame = 0
Query:    1 GIERAFLVNSPKLASIETLKSARVRKSKLYYLRNIIGKAGRLKQRVNKK 49
            G+ERAFLVNSPK  SIE LKSARV KSKLYYLRNIIGKAGRLKQ   K+
Sbjct:  100 GVERAFLVNSPKFVSIEVLKSARVSKSKLYYLRNIIGKAGRLKQSFKKR 148          
BLAST of mRNA_M-pyrifera_M_contig127318.5500.1 vs. uniprot
Match: A0A8F0JYX3_9PHAE (Ribosomal protein L19 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JYX3_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 2.010e-14
Identity = 36/49 (73.47%), Postives = 41/49 (83.67%), Query Frame = 0
Query:    1 GIERAFLVNSPKLASIETLKSARVRKSKLYYLRNIIGKAGRLKQRVNKK 49
            G+ER FLV+SPKL SIE +KS+RVR+SKLYYLRNIIGK  RLKQR   K
Sbjct:   82 GVERKFLVHSPKLESIEVIKSSRVRRSKLYYLRNIIGKGSRLKQRFRTK 130          
BLAST of mRNA_M-pyrifera_M_contig127318.5500.1 vs. uniprot
Match: A0A2U9NP33_9STRA (50S ribosomal protein L19, chloroplastic n=1 Tax=Guinardia striata TaxID=1514137 RepID=A0A2U9NP33_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.810e-13
Identity = 33/47 (70.21%), Postives = 42/47 (89.36%), Query Frame = 0
Query:    1 GIERAFLVNSPKLASIETLKSARVRKSKLYYLRNIIGKAGRLKQRVN 47
            GIER FLV+SPK+ASI+ L+S++VR++KLYYLRN+ GKA RLKQR N
Sbjct:   74 GIERVFLVHSPKVASIQVLRSSKVRRAKLYYLRNLRGKASRLKQRFN 120          
BLAST of mRNA_M-pyrifera_M_contig127318.5500.1 vs. uniprot
Match: A0A514CQ32_9STRA (50S ribosomal protein L19, chloroplastic n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A514CQ32_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 7.830e-13
Identity = 31/48 (64.58%), Postives = 42/48 (87.50%), Query Frame = 0
Query:    1 GIERAFLVNSPKLASIETLKSARVRKSKLYYLRNIIGKAGRLKQRVNK 48
            G+ER FLVNSPK+ +IE ++S++VR+SKLYYLR++ GKA RLKQ+ NK
Sbjct:   76 GVERCFLVNSPKIKTIELIRSSKVRRSKLYYLRDLAGKATRLKQKFNK 123          
BLAST of mRNA_M-pyrifera_M_contig127318.5500.1 vs. uniprot
Match: A0A516ZAD0_9STRA (50S ribosomal protein L19, chloroplastic n=1 Tax=Pseudopedinella elastica TaxID=35684 RepID=A0A516ZAD0_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 8.200e-13
Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    1 GIERAFLVNSPKLASIETLKSARVRKSKLYYLRNIIGKAGRLKQRVN 47
            GIER FL++SPK+ SI+ L SA+VR+SKLYYLRN+ GKA RLKQR N
Sbjct:   79 GIERCFLIHSPKINSIQILSSAKVRRSKLYYLRNLSGKATRLKQRFN 125          
BLAST of mRNA_M-pyrifera_M_contig127318.5500.1 vs. uniprot
Match: A0A0R6LUN6_UNDPI (50S ribosomal protein L19, chloroplastic n=25 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUN6_UNDPI)

HSP 1 Score: 66.2 bits (160), Expect = 1.240e-12
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 GIERAFLVNSPKLASIETLKSARVRKSKLYYLRNIIGKAGRLKQRVNKK 49
            G+ER FL++SPK  SIE +KS+RVR+SKLYYLR+I+GK  RLKQR   K
Sbjct:   80 GVERNFLIHSPKFESIEVIKSSRVRRSKLYYLRSIVGKGSRLKQRFRTK 128          
BLAST of mRNA_M-pyrifera_M_contig127318.5500.1 vs. uniprot
Match: A0A8F0F7M0_9PHAE (Ribosomal protein L19 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7M0_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 1.300e-12
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 GIERAFLVNSPKLASIETLKSARVRKSKLYYLRNIIGKAGRLKQRVNKK 49
            G+ER FL++SPK  SIE +KS+RVR+SKLYYLR+I+GK  RLKQR   K
Sbjct:   82 GVERRFLIHSPKFESIEIIKSSRVRRSKLYYLRSIVGKGSRLKQRFRTK 130          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127318.5500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J767_ECTSI4.380e-2195.9250S ribosomal protein L19, chloroplastic n=2 Tax=E... [more]
A0A6B7EVN0_9PHAE2.890e-1987.7650S ribosomal protein L19 n=1 Tax=Cladosiphon okam... [more]
A0A1I9LVW4_9PHAE8.150e-1879.5950S ribosomal protein L19, chloroplastic n=1 Tax=P... [more]
A0A7T8JK70_SCYLO1.180e-1681.6350S ribosomal protein L19, chloroplastic n=5 Tax=S... [more]
A0A8F0JYX3_9PHAE2.010e-1473.47Ribosomal protein L19 n=1 Tax=Chorda asiatica TaxI... [more]
A0A2U9NP33_9STRA1.810e-1370.2150S ribosomal protein L19, chloroplastic n=1 Tax=G... [more]
A0A514CQ32_9STRA7.830e-1364.5850S ribosomal protein L19, chloroplastic n=1 Tax=R... [more]
A0A516ZAD0_9STRA8.200e-1370.2150S ribosomal protein L19, chloroplastic n=1 Tax=P... [more]
A0A0R6LUN6_UNDPI1.240e-1265.3150S ribosomal protein L19, chloroplastic n=25 Tax=... [more]
A0A8F0F7M0_9PHAE1.300e-1265.31Ribosomal protein L19 n=2 Tax=Laminariales TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001857Ribosomal protein L19PFAMPF01245Ribosomal_L19coord: 1..45
e-value: 4.4E-13
score: 49.1
IPR001857Ribosomal protein L19PANTHERPTHR15680RIBOSOMAL PROTEIN L19coord: 1..46
IPR038657Ribosomal protein L19 superfamilyGENE3D2.30.30.790coord: 1..49
e-value: 1.2E-5
score: 27.0
NoneNo IPR availablePANTHERPTHR15680:SF11coord: 1..46
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 1..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127318contigM-pyrifera_M_contig127318:1..150 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127318.5500.1mRNA_M-pyrifera_M_contig127318.5500.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig127318 1..150 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig127318.5500.1 ID=prot_M-pyrifera_M_contig127318.5500.1|Name=mRNA_M-pyrifera_M_contig127318.5500.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=50bp
GIERAFLVNSPKLASIETLKSARVRKSKLYYLRNIIGKAGRLKQRVNKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001857Ribosomal_L19
IPR038657L19_sf
IPR008991Translation_prot_SH3-like_sf