prot_M-pyrifera_M_contig127288.5492.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig127288.5492.1
Unique Nameprot_M-pyrifera_M_contig127288.5492.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length168
Homology
BLAST of mRNA_M-pyrifera_M_contig127288.5492.1 vs. uniprot
Match: A0A3D5DFC7_9GAMM (LPS export ABC transporter permease LptG n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DFC7_9GAMM)

HSP 1 Score: 253 bits (645), Expect = 3.740e-81
Identity = 129/168 (76.79%), Postives = 146/168 (86.90%), Query Frame = 0
Query:    1 LIDELEAVGRGSYGIVNALIIVAMSAPSLAYELFPMAALIGSLLGLGTMMRNGEIVVIRCAGVSKFRVVVSVMKAGLLFVIAAVLVGEVIAPPAEAFARQYRSVAINDRITLKTHNGFWARDGNSYINIREILPGNRIEDIFIYEFDANSELRTSTHARRALYVDGRW 168
            LIDELEAVGRGSYGI    + V +SAPSLAYELFPMAALIGSLLGLG MMR+GEI VIRCAGVSK +VV SVMKAG++FV  AV VGE++APPAE++ARQYRS+AINDRI LKT NGFW RDG+SYINIRE+LPGN+I+DIFIYEFDA S LR STHA+ A Y+D RW
Sbjct:   32 LIDELEAVGRGSYGIGQVFVYVLLSAPSLAYELFPMAALIGSLLGLGGMMRDGEITVIRCAGVSKLKVVASVMKAGVMFVGVAVCVGELLAPPAESYARQYRSMAINDRIALKTQNGFWVRDGDSYINIREVLPGNQIKDIFIYEFDAQSRLRMSTHAKHANYIDDRW 199          
BLAST of mRNA_M-pyrifera_M_contig127288.5492.1 vs. uniprot
Match: A0A523P2R4_9PROT (LPS export ABC transporter permease LptG n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P2R4_9PROT)

HSP 1 Score: 244 bits (622), Expect = 1.120e-77
Identity = 125/168 (74.40%), Postives = 144/168 (85.71%), Query Frame = 0
Query:    1 LIDELEAVGRGSYGIVNALIIVAMSAPSLAYELFPMAALIGSLLGLGTMMRNGEIVVIRCAGVSKFRVVVSVMKAGLLFVIAAVLVGEVIAPPAEAFARQYRSVAINDRITLKTHNGFWARDGNSYINIREILPGNRIEDIFIYEFDANSELRTSTHARRALYVDGRW 168
            LIDELE VGRGSYGIV   + V MSAP+LAYELFPMAALIG+LLGLG+MM NGEI V+RCAGVSK R+V SVMKA +LFV  A+ VGE IAPPAE +ARQYRS+AIN+RI L+T NGFWARD NS+INIREILPG++I+DIFIYEFD  SELRTSTHA+ A YV+ +W
Sbjct:   32 LIDELEDVGRGSYGIVQVFVYVLMSAPALAYELFPMAALIGALLGLGSMMHNGEITVVRCAGVSKLRIVGSVMKAAVLFVAIAMAVGEFIAPPAEGYARQYRSMAINNRIVLQTRNGFWARDANSFINIREILPGDQIKDIFIYEFDRESELRTSTHAKYARYVEDQW 199          
BLAST of mRNA_M-pyrifera_M_contig127288.5492.1 vs. uniprot
Match: A0A3M1DLJ5_9GAMM (LPS export ABC transporter permease LptG n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1DLJ5_9GAMM)

HSP 1 Score: 194 bits (494), Expect = 2.230e-58
Identity = 99/167 (59.28%), Postives = 130/167 (77.84%), Query Frame = 0
Query:    2 IDELEAVGRGSYGIVNALIIVAMSAPSLAYELFPMAALIGSLLGLGTMMRNGEIVVIRCAGVSKFRVVVSVMKAGLLFVIAAVLVGEVIAPPAEAFARQYRSVAINDRITLKTHNGFWARDGNSYINIREILPGNRIEDIFIYEFDANSELRTSTHARRALYVDGRW 168
            +DELE VG+G YGI   +  +A+S P LAY+LFPMAAL+G+LLGLG +++N EI  +R AGVS  R+V +V+KA LL ++ AV++GE IAP  E  AR  RS+A+ D+ITLK+  GFW+RDG+SYINIR ILPG++IE I+IYEFD +  LRTST+ARRA Y +GRW
Sbjct:   33 LDELENVGQGRYGIPQVIEYIALSTPYLAYQLFPMAALVGALLGLGVLVKNSEITAMRAAGVSLPRIVAAVLKASLLLMLLAVIIGEFIAPVTEEEARTGRSIAMADQITLKSRYGFWSRDGSSYINIRRILPGDQIESIYIYEFDQSHRLRTSTYARRATYQEGRW 199          
BLAST of mRNA_M-pyrifera_M_contig127288.5492.1 vs. uniprot
Match: A0A2D7S645_9GAMM (LPS export ABC transporter permease LptG n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2D7S645_9GAMM)

HSP 1 Score: 181 bits (460), Expect = 2.740e-53
Identity = 85/168 (50.60%), Postives = 131/168 (77.98%), Query Frame = 0
Query:    1 LIDELEAVGRGSYGIVNALIIVAMSAPSLAYELFPMAALIGSLLGLGTMMRNGEIVVIRCAGVSKFRVVVSVMKAGLLFVIAAVLVGEVIAPPAEAFARQYRSVAINDRITLKTHNGFWARDGNSYINIREILPGNRIEDIFIYEFDANSELRTSTHARRALYVDGRW 168
            L+D+L+A GRG+YG++ A+  V ++ P L+YELFP+A +IG + GLG +  N E+V++R +G+SK ++  +++K GL+F+I ++L+GEVIAP +E  A+Q RSVA+ ++I++KT NGFW+RDGNSYINIR+ILP  ++EDI IYEFD + +LR + HA  A + +G+W
Sbjct:   31 LVDQLDATGRGNYGVLQAIQYVLLTVPRLSYELFPIATVIGCMAGLGILANNNELVILRTSGLSKMQLAYALVKIGLIFIIISILIGEVIAPISEQAAQQKRSVALTEQISMKTKNGFWSRDGNSYINIRKILPNEKLEDIRIYEFDKDRQLRGTIHAESADFNNGKW 198          
BLAST of mRNA_M-pyrifera_M_contig127288.5492.1 vs. uniprot
Match: A0A1G0G6Q6_9GAMM (LPS export ABC transporter permease LptG (Fragment) n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0G6Q6_9GAMM)

HSP 1 Score: 179 bits (455), Expect = 7.450e-53
Identity = 89/168 (52.98%), Postives = 125/168 (74.40%), Query Frame = 0
Query:    1 LIDELEAVGRGSYGIVNALIIVAMSAPSLAYELFPMAALIGSLLGLGTMMRNGEIVVIRCAGVSKFRVVVSVMKAGLLFVIAAVLVGEVIAPPAEAFARQYRSVAINDRITLKTHNGFWARDGNSYINIREILPGNRIEDIFIYEFDANSELRTSTHARRALYVDGRW 168
            LID+LE  GRG YG++ A+  V ++ P LA ELFP+AA+IGS+  +G ++R+GE+ VIR AGVS+ R+  ++ K GLL  +  V++GE++AP  E  A+  RS+A+ ++I LKT  GFW+RDG+SYINIR+ILPG+RIEDI+IYEFD    L +ST+AR A Y D +W
Sbjct:   32 LIDQLEETGRGHYGLLQAIEYVVLTMPRLACELFPIAAVIGSMAAIGLLIRSGELTVIRAAGVSQLRIAYALCKTGLLLALITVVIGELVAPICEQAAQHRRSIALTEQIALKTKYGFWSRDGHSYINIRKILPGDRIEDIYIYEFDEEDRLFSSTYAREAEYTDEQW 199          
BLAST of mRNA_M-pyrifera_M_contig127288.5492.1 vs. uniprot
Match: A0A1S9D1I3_9GAMM (Lipopolysaccharide export system permease protein LptG n=1 Tax=Chromatiales bacterium USCg_Taylor TaxID=1934255 RepID=A0A1S9D1I3_9GAMM)

HSP 1 Score: 179 bits (453), Expect = 3.150e-52
Identity = 89/156 (57.05%), Postives = 119/156 (76.28%), Query Frame = 0
Query:   13 YGIVNALIIVAMSAPSLAYELFPMAALIGSLLGLGTMMRNGEIVVIRCAGVSKFRVVVSVMKAGLLFVIAAVLVGEVIAPPAEAFARQYRSVAINDRITLKTHNGFWARDGNSYINIREILPGNRIEDIFIYEFDANSELRTSTHARRALYVDGRW 168
            YGI+  +  V  S P L YELFP+AALIG+L+GLGT++RN E++VIR +GVS  R+V+S MK G +FV+A+++VGE IAPP+E  A+  +S+A  ++I L+T  GFWARDG SYINIR +LPGNR+E ++IYEFD  + LR ST AR+A Y  GRW
Sbjct:   44 YGILTIVEFVFFSTPRLTYELFPIAALIGTLIGLGTLVRNSEMIVIRTSGVSLARIVLSAMKLGSVFVLASLVVGEFIAPPSEEVAQHRKSIATTNQIALRTPGGFWARDGRSYINIRRVLPGNRVEGVYIYEFDDKNRLRVSTSARQAYYKQGRW 199          
BLAST of mRNA_M-pyrifera_M_contig127288.5492.1 vs. uniprot
Match: A0A521RBK7_9GAMM (LPS export ABC transporter permease LptG n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521RBK7_9GAMM)

HSP 1 Score: 177 bits (450), Expect = 8.850e-52
Identity = 81/168 (48.21%), Postives = 122/168 (72.62%), Query Frame = 0
Query:    1 LIDELEAVGRGSYGIVNALIIVAMSAPSLAYELFPMAALIGSLLGLGTMMRNGEIVVIRCAGVSKFRVVVSVMKAGLLFVIAAVLVGEVIAPPAEAFARQYRSVAINDRITLKTHNGFWARDGNSYINIREILPGNRIEDIFIYEFDANSELRTSTHARRALYVDGRW 168
            +ID+LE  GRG+YG+ +A++ V ++ P LAY+LFP+AA+IG +  LG +    E+  IRCAGVS+  + V + KAG L ++ AV+ GE+IAP  E  A+Q RS+A++DR+ +   NGFW +DGNS++N+R+ILP NR+E+++IYEFD   +LR++T A +A Y   RW
Sbjct:   32 VIDQLELTGRGNYGVGDAMLYVLLTTPRLAYDLFPIAAVIGGMAALGVLAHGSELTAIRCAGVSRLELSVLLAKAGFLLIVGAVITGELIAPVTEELAQQRRSMALSDRLAMNARNGFWGKDGNSFVNVRKILPDNRVEELYIYEFDEGDQLRSATFAAKASYAGDRW 199          
BLAST of mRNA_M-pyrifera_M_contig127288.5492.1 vs. uniprot
Match: A0A1G0JER8_9GAMM (LPS export ABC transporter permease LptG n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_56_15 TaxID=1798298 RepID=A0A1G0JER8_9GAMM)

HSP 1 Score: 177 bits (450), Expect = 8.850e-52
Identity = 87/168 (51.79%), Postives = 121/168 (72.02%), Query Frame = 0
Query:    1 LIDELEAVGRGSYGIVNALIIVAMSAPSLAYELFPMAALIGSLLGLGTMMRNGEIVVIRCAGVSKFRVVVSVMKAGLLFVIAAVLVGEVIAPPAEAFARQYRSVAINDRITLKTHNGFWARDGNSYINIREILPGNRIEDIFIYEFDANSELRTSTHARRALYVDGRW 168
            +ID+LE  GRG Y + +AL+ V ++ P LAYELFP+AA+IG +  LG +    E+ VIR AGVS+  + V + K+G + ++AAV+ GE IAP +E  A+Q RS+A++DRI L T NGFW +DGNS+I+IR+ILP NR+E+++IYEFD  + LR ST A RA Y D  W
Sbjct:   32 IIDQLELTGRGDYEVSDALLFVLLTTPRLAYELFPVAAVIGGMATLGILAHGNELTVIRAAGVSRVDLAVLLAKSGFILIVAAVITGEFIAPVSEGLAQQKRSMALSDRIALNTRNGFWGKDGNSFIHIRKILPDNRVEELYIYEFDDENRLRNSTFAARASYTDDHW 199          
BLAST of mRNA_M-pyrifera_M_contig127288.5492.1 vs. uniprot
Match: A0A836TS50_9GAMM (LPS export ABC transporter permease LptG n=1 Tax=Thiotrichaceae bacterium TaxID=2030882 RepID=A0A836TS50_9GAMM)

HSP 1 Score: 177 bits (448), Expect = 1.720e-51
Identity = 85/168 (50.60%), Postives = 127/168 (75.60%), Query Frame = 0
Query:    1 LIDELEAVGRGSYGIVNALIIVAMSAPSLAYELFPMAALIGSLLGLGTMMRNGEIVVIRCAGVSKFRVVVSVMKAGLLFVIAAVLVGEVIAPPAEAFARQYRSVAINDRITLKTHNGFWARDGNSYINIREILPGNRIEDIFIYEFDANSELRTSTHARRALYVDGRW 168
            L+D+L+  GRGSYG++ A+  V ++ P L YELFP+A +IGS+  LG +    E+ VIR +GVS+ R+  S+MK GL+FV+ +VL+GEV+AP +E  A++ RS+A+ ++I+LKT NGFW+RDG++YINIR+ILP +R+E+I+IYEFD + +LR+S  A  A Y   +W
Sbjct:   31 LVDQLDDTGRGSYGVMEAIQYVLLTVPRLCYELFPIATVIGSMAALGLLANTSELAVIRTSGVSQMRMAFSLMKTGLIFVVISVLIGEVVAPISEQAAQRKRSIALTEQISLKTKNGFWSRDGDNYINIRKILPNDRVEEIYIYEFDEDHKLRSSIRASSAEYDQDKW 198          
BLAST of mRNA_M-pyrifera_M_contig127288.5492.1 vs. uniprot
Match: A0A849ML21_9PROT (LPS export ABC transporter permease LptG n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A849ML21_9PROT)

HSP 1 Score: 176 bits (445), Expect = 4.840e-51
Identity = 85/168 (50.60%), Postives = 129/168 (76.79%), Query Frame = 0
Query:    1 LIDELEAVGRGSYGIVNALIIVAMSAPSLAYELFPMAALIGSLLGLGTMMRNGEIVVIRCAGVSKFRVVVSVMKAGLLFVIAAVLVGEVIAPPAEAFARQYRSVAINDRITLKTHNGFWARDGNSYINIREILPGNRIEDIFIYEFDANSELRTSTHARRALYVDGRW 168
            L+D+L+  G+G+YG++ A+  V ++ P L+YELFP+A +IGS+  LG +  + E+ VIR +GVS+ ++ VS++K GL+FV+ ++L+GEVIAP +E  A+Q RSVA+  +I LKT NGFW+RDG+SYINIR+ILPG+R+E+I+IY+FD + +L +S  A+ A Y   RW
Sbjct:   31 LVDQLDDTGQGNYGVLEAIQYVLLTIPRLSYELFPIATVIGSMAALGMLANSSELAVIRTSGVSRIQLAVSLIKTGLIFVVISMLIGEVIAPISEQAAQQKRSVALTKQIALKTKNGFWSRDGDSYINIRKILPGDRVEEIYIYDFDEDHQLISSIRAKHAEYDQDRW 198          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127288.5492.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DFC7_9GAMM3.740e-8176.79LPS export ABC transporter permease LptG n=1 Tax=G... [more]
A0A523P2R4_9PROT1.120e-7774.40LPS export ABC transporter permease LptG n=1 Tax=P... [more]
A0A3M1DLJ5_9GAMM2.230e-5859.28LPS export ABC transporter permease LptG n=1 Tax=G... [more]
A0A2D7S645_9GAMM2.740e-5350.60LPS export ABC transporter permease LptG n=1 Tax=L... [more]
A0A1G0G6Q6_9GAMM7.450e-5352.98LPS export ABC transporter permease LptG (Fragment... [more]
A0A1S9D1I3_9GAMM3.150e-5257.05Lipopolysaccharide export system permease protein ... [more]
A0A521RBK7_9GAMM8.850e-5248.21LPS export ABC transporter permease LptG n=1 Tax=G... [more]
A0A1G0JER8_9GAMM8.850e-5251.79LPS export ABC transporter permease LptG n=1 Tax=G... [more]
A0A836TS50_9GAMM1.720e-5150.60LPS export ABC transporter permease LptG n=1 Tax=T... [more]
A0A849ML21_9PROT4.840e-5150.60LPS export ABC transporter permease LptG n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005495Permease LptG/LptF-relatedPFAMPF03739LptF_LptGcoord: 1..166
e-value: 9.9E-31
score: 106.9
IPR005495Permease LptG/LptF-relatedPANTHERPTHR33529FAMILY NOT NAMEDcoord: 1..168
NoneNo IPR availablePANTHERPTHR33529:SF2LIPOPOLYSACCHARIDE EXPORT SYSTEM PERMEASE PROTEIN LPTGcoord: 1..168
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..91
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 92..168
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..47
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..28
NoneNo IPR availableTMHMMTMhelixcoord: 68..90
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 33..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127288contigM-pyrifera_M_contig127288:2..505 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127288.5492.1mRNA_M-pyrifera_M_contig127288.5492.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig127288 2..505 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig127288.5492.1 ID=prot_M-pyrifera_M_contig127288.5492.1|Name=mRNA_M-pyrifera_M_contig127288.5492.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp
LIDELEAVGRGSYGIVNALIIVAMSAPSLAYELFPMAALIGSLLGLGTMM
RNGEIVVIRCAGVSKFRVVVSVMKAGLLFVIAAVLVGEVIAPPAEAFARQ
YRSVAINDRITLKTHNGFWARDGNSYINIREILPGNRIEDIFIYEFDANS
ELRTSTHARRALYVDGRW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005495LptG/LptF_permease