prot_M-pyrifera_M_contig127095.5454.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig127095.5454.1
Unique Nameprot_M-pyrifera_M_contig127095.5454.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length121
Homology
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BLAST of mRNA_M-pyrifera_M_contig127095.5454.1 vs. uniprot
Match: A0A7L1HZV4_9CHAR (LPXN protein (Fragment) n=3 Tax=Charadriiformes TaxID=8906 RepID=A0A7L1HZV4_9CHAR)

HSP 1 Score: 81.3 bits (199), Expect = 9.400e-16
Identity = 37/109 (33.94%), Postives = 59/109 (54.13%), Query Frame = 0 
Query:    5 CAECKKPVGNDCLRLFGKQWHLACFKCSICAQAFDEDSYVLEINGNPVCKADYDKAQAKKCARCQEPVIDDFVDVMDNLYHVACFTCAKCSATLTTG-FFKRQGQAVCK 112
            CA C  P+    L    + WH   F C  C + F +D +  E +G P C+ D+    A KC  C+ PV D+++  +  ++H ACF CA+C  + T+G FF+ +G+  C+
Sbjct:  172 CAYCASPIREKVLTALDQTWHPEHFFCVHCGKVFGDDGF-HEWSGKPYCRQDFLAMFAPKCQGCERPVTDNYLSALQGVWHPACFVCAECLNSFTSGSFFELEGRPYCE 279
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BLAST of mRNA_M-pyrifera_M_contig127095.5454.1 vs. uniprot
Match: UPI000B8F68B1 (actin-binding LIM protein 1 isoform X1 n=2 Tax=Folsomia candida TaxID=158441 RepID=UPI000B8F68B1)

HSP 1 Score: 79.0 bits (193), Expect = 1.150e-14
Identity = 38/115 (33.04%), Postives = 56/115 (48.70%), Query Frame = 0 
Query:    5 CAECKKPVGNDCLRLFGKQWHLACFKCSICAQAFDEDSYVLEINGNPVCKADYDKAQAKKCARCQEPVIDDFVDVMDNLYHVACFTCAKCSATLTTGFFKRQG--QAVCKACKNL 117
            C  CKK    + LR+  K +H+ACFKC +CA +  +  +     G   C +DY +    +C  C   V  + V  + N YH ACFTCA+C     TG        + +C+ C N+
Sbjct:  102 CQACKKKCSGEVLRVQDKYFHIACFKCKVCASSLAQGGFFFH-EGEYYCTSDYQQRWGTQCGACGRYVEGEVVTALGNTYHQACFTCARCRKPFPTGAKVTVAGREILCQRCVNI 215
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BLAST of mRNA_M-pyrifera_M_contig127095.5454.1 vs. uniprot
Match: A0A670IG49_PODMU (Uncharacterized protein n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670IG49_PODMU)

HSP 1 Score: 74.7 bits (182), Expect = 2.650e-13
Identity = 41/114 (35.96%), Postives = 61/114 (53.51%), Query Frame = 0 
Query:    5 CAECKKPVGND-CLRLFGKQWHLACFKCSICAQAFDEDSYVLEINGNPVCKADYDKAQAKKCARCQEPVI-DDFV-DVMDNLYHVACFTCAKCSATLTTG--FFKRQGQAVCKA 113
            CA C  P+ +   LR+  + WH  C KC+ C QA     Y    N    CK DY+K    KC+ C + V   +F+  V++N+YHV CF+C +C   L  G  F  ++GQ +C++
Sbjct:   35 CAGCNTPISDRFLLRVNERSWHEGCLKCAACLQALSGTCYCR--NRQLYCKHDYEKLFQTKCSGCLKAVAPSEFIMRVLENVYHVHCFSCCECERRLQRGDEFVLKEGQLLCRS 146
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BLAST of mRNA_M-pyrifera_M_contig127095.5454.1 vs. uniprot
Match: A0A670IG57_PODMU (Uncharacterized protein n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670IG57_PODMU)

HSP 1 Score: 74.7 bits (182), Expect = 2.650e-13
Identity = 41/114 (35.96%), Postives = 61/114 (53.51%), Query Frame = 0 
Query:    5 CAECKKPVGND-CLRLFGKQWHLACFKCSICAQAFDEDSYVLEINGNPVCKADYDKAQAKKCARCQEPVI-DDFV-DVMDNLYHVACFTCAKCSATLTTG--FFKRQGQAVCKA 113
            CA C  P+ +   LR+  + WH  C KC+ C QA     Y    N    CK DY+K    KC+ C + V   +F+  V++N+YHV CF+C +C   L  G  F  ++GQ +C++
Sbjct:   49 CAGCNTPISDRFLLRVNERSWHEGCLKCAACLQALSGTCYCR--NRQLYCKHDYEKLFQTKCSGCLKAVAPSEFIMRVLENVYHVHCFSCCECERRLQRGDEFVLKEGQLLCRS 160
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BLAST of mRNA_M-pyrifera_M_contig127095.5454.1 vs. uniprot
Match: A0A8D2JDN1_VARKO (Uncharacterized protein n=1 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2JDN1_VARKO)

HSP 1 Score: 72.4 bits (176), Expect = 5.770e-13
Identity = 40/114 (35.09%), Postives = 60/114 (52.63%), Query Frame = 0 
Query:    5 CAECKKPVGND-CLRLFGKQWHLACFKCSICAQAFDEDSYVLEINGNPVCKADYDKAQAKKCARCQEPVI-DDFV-DVMDNLYHVACFTCAKCSATLTTG--FFKRQGQAVCKA 113
            CA C  P+ +   LR+  + WH  C KC+ C Q      Y    N    CK DY+K    KC+ C + V   +F+  V++N+YHV CF+C +C   L  G  F  ++GQ +C++
Sbjct:   42 CAGCNTPISDRFLLRVNERSWHEGCVKCAACLQPLSGTCYCR--NRQLYCKHDYEKLFQTKCSGCLKAVAPSEFIMRVLENVYHVHCFSCCECERRLQRGDEFVLKEGQLLCRS 153
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BLAST of mRNA_M-pyrifera_M_contig127095.5454.1 vs. uniprot
Match: A0A6I9Y2J0_9SAUR (LIM/homeobox protein LMX-1.2-like n=1 Tax=Thamnophis sirtalis TaxID=35019 RepID=A0A6I9Y2J0_9SAUR)

HSP 1 Score: 72.4 bits (176), Expect = 6.950e-13
Identity = 40/114 (35.09%), Postives = 60/114 (52.63%), Query Frame = 0 
Query:    5 CAECKKPVGND-CLRLFGKQWHLACFKCSICAQAFDEDSYVLEINGNPVCKADYDKAQAKKCARCQEPVI-DDFV-DVMDNLYHVACFTCAKCSATLTTG--FFKRQGQAVCKA 113
            CA C  P+ +   LR+  + WH  C KC+ C Q      Y    N    CK DY+K    KC+ C + V   +F+  V++N+YHV CF+C +C   L  G  F  ++GQ +C++
Sbjct:   29 CAGCNTPISDRFLLRVNERSWHEGCVKCAACLQPLSGTCYCR--NRQLYCKHDYEKLFQTKCSGCLKAVAPSEFIMRVLENVYHVHCFSCCECERRLQRGDEFVLKEGQLLCRS 140
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BLAST of mRNA_M-pyrifera_M_contig127095.5454.1 vs. uniprot
Match: UPI0011C432A4 (LIM homeobox transcription factor 1-beta-like n=1 Tax=Calypte anna TaxID=9244 RepID=UPI0011C432A4)

HSP 1 Score: 73.6 bits (179), Expect = 6.970e-13
Identity = 39/114 (34.21%), Postives = 60/114 (52.63%), Query Frame = 0 
Query:    5 CAECKKPVGND-CLRLFGKQWHLACFKCSICAQAFDEDSYVLEINGNPVCKADYDKAQAKKCARCQEPVIDD--FVDVMDNLYHVACFTCAKCSATLTTG--FFKRQGQAVCKA 113
            CA C  P+ +   LR+    WH  C KC+IC Q+     Y    N    CK DY+K    KC+ C + +      + V++N+YHV CF+C +C  +L  G  F  ++GQ +C++
Sbjct:   29 CAGCDSPISDRFLLRVNECSWHEGCVKCTICLQSLTGSCYWR--NRQLYCKHDYEKLFQTKCSSCLKTITPSELIMKVLENVYHVHCFSCCECERSLQPGDEFVLKEGQLLCRS 140
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BLAST of mRNA_M-pyrifera_M_contig127095.5454.1 vs. uniprot
Match: A0A6J0J7B4_9PASS (LIM homeobox transcription factor 1-alpha-like n=7 Tax=Passeriformes TaxID=9126 RepID=A0A6J0J7B4_9PASS)

HSP 1 Score: 73.2 bits (178), Expect = 8.830e-13
Identity = 39/117 (33.33%), Postives = 60/117 (51.28%), Query Frame = 0 
Query:    2 GSECAECKKPVGND-CLRLFGKQWHLACFKCSICAQAFDEDSYVLEINGNPVCKADYDKAQAKKCARCQEPV--IDDFVDVMDNLYHVACFTCAKCSATLTTG--FFKRQGQAVCKA 113
            G  CA C   + +   LR+  + WH  C KCS+C Q      Y  +      CK DYDK    KC+ C + +   +  + V++N+YHV CF+C +C   L  G  F  ++GQ +C++
Sbjct:    2 GEVCAGCDSRISDRFLLRVNERSWHEGCVKCSVCLQGLSGSCYSRDRR--LYCKHDYDKLFQTKCSSCLKAIGPSELIMRVLENVYHVQCFSCCECERRLQRGDEFVLKEGQLLCRS 116
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BLAST of mRNA_M-pyrifera_M_contig127095.5454.1 vs. uniprot
Match: A0A817A8F8_9BILA (Hypothetical protein n=8 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A817A8F8_9BILA)

HSP 1 Score: 72.8 bits (177), Expect = 1.660e-12
Identity = 38/118 (32.20%), Postives = 58/118 (49.15%), Query Frame = 0 
Query:    3 SECAECKKPVGNDCLRLFGK--QWHLACFKCSICAQAFDEDSYVLEINGNPVCKADYDKAQAKKCARCQEPVIDDFVDVMDNLY---HVACFTCAKCSATLTTG---FFKRQGQAVCK 112
            S C  C  P+ +  L       +WH+ C +CS C Q  DE +    ++G P+CK+DY +  A KCA+CQE    +   +    Y   H  CF C  C   L +G   + ++Q Q +C+
Sbjct:   33 SICTGCNCPIYDRYLLKVAPDLEWHIQCLRCSECGQYLDETATCFVLDGKPLCKSDYIRLFASKCAKCQESFSKNEFYIRTAFYRRYHPDCFRCNHCDRLLVSGDEYYLRKQNQILCQ 150
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BLAST of mRNA_M-pyrifera_M_contig127095.5454.1 vs. uniprot
Match: A0A670Z1M3_PSETE (Uncharacterized protein n=1 Tax=Pseudonaja textilis TaxID=8673 RepID=A0A670Z1M3_PSETE)

HSP 1 Score: 72.4 bits (176), Expect = 1.770e-12
Identity = 40/114 (35.09%), Postives = 60/114 (52.63%), Query Frame = 0 
Query:    5 CAECKKPVGND-CLRLFGKQWHLACFKCSICAQAFDEDSYVLEINGNPVCKADYDKAQAKKCARCQEPVI-DDFV-DVMDNLYHVACFTCAKCSATLTTG--FFKRQGQAVCKA 113
            CA C  P+ +   LR+  + WH  C KC+ C Q      Y    N    CK DY+K    KC+ C + V   +F+  V++N+YHV CF+C +C   L  G  F  ++GQ +C++
Sbjct:   49 CAGCNTPISDRFLLRVNERSWHEGCVKCAACLQPLSGTCYCR--NRQLYCKHDYEKLFQTKCSGCLKAVAPSEFIMRVLENVYHVHCFSCCECERRLQRGDEFVLKEGQLLCRS 160
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127095.5454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7L1HZV4_9CHAR9.400e-1633.94LPXN protein (Fragment) n=3 Tax=Charadriiformes Ta... [more]
UPI000B8F68B11.150e-1433.04actin-binding LIM protein 1 isoform X1 n=2 Tax=Fol... [more]
A0A670IG49_PODMU2.650e-1335.96Uncharacterized protein n=1 Tax=Podarcis muralis T... [more]
A0A670IG57_PODMU2.650e-1335.96Uncharacterized protein n=1 Tax=Podarcis muralis T... [more]
A0A8D2JDN1_VARKO5.770e-1335.09Uncharacterized protein n=1 Tax=Varanus komodoensi... [more]
A0A6I9Y2J0_9SAUR6.950e-1335.09LIM/homeobox protein LMX-1.2-like n=1 Tax=Thamnoph... [more]
UPI0011C432A46.970e-1334.21LIM homeobox transcription factor 1-beta-like n=1 ... [more]
A0A6J0J7B4_9PASS8.830e-1333.33LIM homeobox transcription factor 1-alpha-like n=7... [more]
A0A817A8F8_9BILA1.660e-1232.20Hypothetical protein n=8 Tax=Rotaria magnacalcarat... [more]
A0A670Z1M3_PSETE1.770e-1235.09Uncharacterized protein n=1 Tax=Pseudonaja textili... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001781Zinc finger, LIM-typeSMARTSM00132lim_4coord: 4..56
e-value: 8.3E-13
score: 58.5
coord: 64..114
e-value: 3.0E-14
score: 63.3
IPR001781Zinc finger, LIM-typePFAMPF00412LIMcoord: 65..114
e-value: 1.9E-12
score: 47.2
coord: 5..59
e-value: 9.1E-13
score: 48.2
IPR001781Zinc finger, LIM-typePROSITEPS00478LIM_DOMAIN_1coord: 5..38
IPR001781Zinc finger, LIM-typePROSITEPS00478LIM_DOMAIN_1coord: 65..98
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 3..63
score: 12.603
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 64..120
score: 9.237
NoneNo IPR availableGENE3D2.10.110.10coord: 2..59
e-value: 2.7E-16
score: 61.2
NoneNo IPR availableGENE3D2.10.110.10coord: 60..117
e-value: 1.1E-15
score: 59.2
NoneNo IPR availablePANTHERPTHR24216FAMILY NOT NAMEDcoord: 4..114
NoneNo IPR availablePANTHERPTHR24216:SF8PAXILLIN, ISOFORM Fcoord: 4..114
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 2..34
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 30..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127095contigM-pyrifera_M_contig127095:135..497 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127095.5454.1mRNA_M-pyrifera_M_contig127095.5454.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig127095 135..497 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig127095.5454.1 ID=prot_M-pyrifera_M_contig127095.5454.1|Name=mRNA_M-pyrifera_M_contig127095.5454.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp
AGSECAECKKPVGNDCLRLFGKQWHLACFKCSICAQAFDEDSYVLEINGN
PVCKADYDKAQAKKCARCQEPVIDDFVDVMDNLYHVACFTCAKCSATLTT
GFFKRQGQAVCKACKNLIPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001781Znf_LIM