prot_M-pyrifera_M_contig126894.5413.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig126894.5413.1
Unique Nameprot_M-pyrifera_M_contig126894.5413.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length168
Homology
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Match: A0A517WM99_9PLAN (Type II secretion system protein F n=8 Tax=Gimesia TaxID=1649453 RepID=A0A517WM99_9PLAN)

HSP 1 Score: 310 bits (794), Expect = 8.360e-103
Identity = 166/168 (98.81%), Postives = 167/168 (99.40%), Query Frame = 0
Query:    1 IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKIAFIVIGGMSLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL 168
            IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLI GSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMI+VADLLTKHGIKIAFIVIGGMSLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL
Sbjct:  154 IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLIFGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMINVADLLTKHGIKIAFIVIGGMSLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL 321          
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Match: A0A517QFS2_9PLAN (Type II secretion system protein F n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517QFS2_9PLAN)

HSP 1 Score: 229 bits (584), Expect = 4.090e-71
Identity = 117/168 (69.64%), Postives = 142/168 (84.52%), Query Frame = 0
Query:    1 IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKIAFIVIGGMSLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL 168
            I VSA T+KLESVIEDYI SER  +Q+RHKLL + FYS +LILGS ILFYFLMTII+G++K L  D G ELPGLT+LMI  +D++  +GIK+  I +G   L+WFSFDFL+ RA+RRR++N+IPVFG+ILSNTS++QFCR+LAGLIDARVKLPEAL LAAQMTRDPNL
Sbjct:  154 IRVSASTDKLESVIEDYIESERLLKQSRHKLLAALFYSAILILGSFILFYFLMTIILGSYKVLMLDLGIELPGLTILMIKTSDVIANYGIKMLLITLGSALLVWFSFDFLRMRAMRRRMINRIPVFGTILSNTSVAQFCRILAGLIDARVKLPEALTLAAQMTRDPNL 321          
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Match: A0A518AFM1_9PLAN (Type II secretion system protein F n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AFM1_9PLAN)

HSP 1 Score: 215 bits (547), Expect = 1.460e-65
Identity = 114/168 (67.86%), Postives = 135/168 (80.36%), Query Frame = 0
Query:    1 IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKIAFIVIGGMSLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL 168
            I VSA T KLESVIEDYI SER  +Q+RHKLLT   Y+  LILGSLILFYFL   I+ +FK L  D GTELPGLT+ M  ++D+L+KHG+KI  I +G   LIWFSFDFL+ +A RRR++N IPVFG+ILSNT+I+QFCR+LAGLIDA VKLP+AL LAAQMTRDPNL
Sbjct:  154 IRVSASTGKLESVIEDYIESERLLKQSRHKLLTVLSYAAFLILGSLILFYFLFAFILRSFKELLLDLGTELPGLTISMFRISDVLSKHGVKIMLITLGSTLLIWFSFDFLRMQAARRRIINLIPVFGAILSNTAIAQFCRILAGLIDAGVKLPDALTLAAQMTRDPNL 321          
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Match: A0A517RPJ3_9PLAN (Type II secretion system protein F n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RPJ3_9PLAN)

HSP 1 Score: 185 bits (469), Expect = 6.280e-54
Identity = 95/168 (56.55%), Postives = 131/168 (77.98%), Query Frame = 0
Query:    1 IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKIAFIVIGGMSLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL 168
            I   A T +LES+IEDYI S+R   Q+RHKL+TS FYS VLILG+ +LF FLM  +V +F+S+F DFGTELPG+T+L++ ++D L  +G+ +  I++   + IWFSFD  K +A+RRRL+NQIP+ GSILS+ SI+ FCRMLA +I+A++KLPEA+ LAA+ T+DPNL
Sbjct:  152 IRAGAQTAQLESIIEDYIESQRVLMQSRHKLMTSLFYSSVLILGAFLLFDFLMISVVRSFRSIFLDFGTELPGITILVMRISDFLVAYGLPMLAILMFSFAGIWFSFDLFKMQAIRRRLINQIPILGSILSSISIALFCRMLATIIEAKIKLPEAIDLAAKATKDPNL 319          
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Match: A0A517VP89_9PLAN (Type II secretion system protein F n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VP89_9PLAN)

HSP 1 Score: 184 bits (467), Expect = 1.370e-53
Identity = 97/169 (57.40%), Postives = 126/169 (74.56%), Query Frame = 0
Query:    1 IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKI-AFIVIGGMSLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL 168
            I   A T KLES+IEDYI S+R   Q RH++L S FY+ VL+ GS +LFYFL+  +V NFKS+F DFGTELPG+T+L  S++D  ++ G  I A+ ++  +   WFSFD LK +A RRRLLN IP+FGSIL+ TSI+QFCRMLA +I+A +KLP+A+ LAA  TRDPNL
Sbjct:  156 IRAGAQTGKLESIIEDYIESQRLMAQTRHRILISVFYTSVLVFGSFLLFYFLLVTVVSNFKSIFLDFGTELPGITILAFSISDFFSQFGFPIVAYPIVFALG-FWFSFDLLKLQATRRRLLNLIPIFGSILNYTSIAQFCRMLASIIEANIKLPKAIELAADSTRDPNL 323          
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Match: A0A518IL71_9PLAN (Type II secretion system protein F n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IL71_9PLAN)

HSP 1 Score: 178 bits (452), Expect = 2.120e-51
Identity = 90/162 (55.56%), Postives = 127/162 (78.40%), Query Frame = 0
Query:    7 TEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKIAFIVIGGMSLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL 168
            TE+LES+IE+YI S+R   Q+RHK++TS FYS VL+LG+  LFYFLM  +V NF+S+F DFG ELP +T+L IS+++ L+ +G+    I++   + IWFSFD  K +A+RRRL+N IP+ G+IL+ TSI+ FCRMLA +I+A++KLPEA+ LAA+ T+DPNL
Sbjct:  158 TEQLESIIENYIESQRLLVQSRHKVMTSLFYSCVLVLGTFSLFYFLMVSVVTNFQSIFIDFGIELPTITILTISISNFLSSYGLSALAILLFSFAGIWFSFDLFKMQAIRRRLINHIPILGNILNYTSIALFCRMLATIIEAKIKLPEAIELAAKTTKDPNL 319          
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Match: A0A2E2BWK7_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2BWK7_9PLAN)

HSP 1 Score: 168 bits (425), Expect = 2.150e-47
Identity = 92/172 (53.49%), Postives = 122/172 (70.93%), Query Frame = 0
Query:    1 IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKIAFIVIGGMSLI----WFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL 168
            I   A T  LES+IEDYI S+R   Q+RHK+  S FYS VLI  S +L YFLM  +V +F+S+FE FGTELP LTVL   ++DLL++HG++I    +G   L+    WF FD  K + +RRRL+N+IPVFG ILSNTS +QFCRMLA + +A++ LP+A+ L+A+ T DPNL
Sbjct:  152 ILAGAQTAHLESIIEDYIESQRCLAQSRHKIQISLFYSGVLIAASFLLLYFLMVTVVASFESIFEGFGTELPSLTVLAFQISDLLSEHGLQI----LGWFLLLSVAFWFGFDLFKLQPVRRRLINKIPVFGGILSNTSYAQFCRMLATMTEAKIYLPDAIELSAKTTNDPNL 319          
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Match: A0A2E7D8E6_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D8E6_9PLAN)

HSP 1 Score: 111 bits (278), Expect = 5.440e-26
Identity = 65/168 (38.69%), Postives = 104/168 (61.90%), Query Frame = 0
Query:    1 IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKIAFIVIGGMSLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL 168
            I     T  L  V+E Y+   R R +   ++L +  Y + LIL ++ + +  +  +V  FK +F DFGTELPGLT+L+IS++D L++ GI I  I++    L W     L + + RRRLL +IPVFG + S +S+SQFC++LA L++ +V++P+AL +A   + + NL
Sbjct:  146 IQAGLKTGNLGVVMEQYLMFTRNRSEIGRRVLLTLSYPVCLILCTIGINFGYLAWVVPLFKKIFLDFGTELPGLTMLIISLSDALSEFGIAIVVILVAAAVLAWLITVVLLRPSTRRRLLEKIPVFGPLFSMSSLSQFCQLLAILVENQVRMPDALRMAGTASGNANL 313          
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Match: A0A7C4QLH1_9PLAN (Uncharacterized protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C4QLH1_9PLAN)

HSP 1 Score: 94.7 bits (234), Expect = 4.740e-20
Identity = 59/168 (35.12%), Postives = 94/168 (55.95%), Query Frame = 0
Query:    1 IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKIAFIVIGGMSLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL 168
            I +S    ++E +I DY+ + R+    R  L+    Y +VL+L  L +  FLM+ ++  FK+LFE+FGTELP LT   + V+D+L  HG  +A + +G  +++  +      RA+ + L   IP+ G  L   S+S +C +LA L++  V LP+AL  AA    D  L
Sbjct:   78 IAISLPGGQVELLIHDYLENARRLSDLRRSLILGLTYPLVLLLVFLAVMVFLMSTLLPMFKNLFEEFGTELPALTEFFLKVSDVLVNHGWAVAGVGLGLAAIVLGALRVFGGRAVVQNLWRSIPLLGQGLRWASLSNYCHLLATLMELHVPLPQALRAAATANDDKAL 245          
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Match: UPI00142249B7 (type II secretion system F family protein n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI00142249B7)

HSP 1 Score: 87.0 bits (214), Expect = 4.880e-17
Identity = 56/170 (32.94%), Postives = 95/170 (55.88%), Query Frame = 0
Query:    1 IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKIAFIVIGGMSLIWFSFDFLKKRA-----LRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRD 165
            + V   + ++  V+ +Y+   R+  + RHK + S  Y+ V+    + +    + I+V  FKS+F DF TELPGLTV ++S++D L  +GI I  ++     LI F       RA      ++R+L  +P+ G  L + ++++F RML+ L++    LPEA+ LAA+ T D
Sbjct:  129 VEVGVRSGRIGEVLSEYVKQSRKYMELRHKAMYSIGYAAVVGAACIAVLLVFLLILVPQFKSIFIDFNTELPGLTVAVLSLSDTLRTYGILILAVL-----LILFFLGVRIARAGQWSVWKQRVLRWVPIIGPTLRHMTLARFTRMLSLLVENNTPLPEAVRLAARATND 293          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517WM99_9PLAN8.360e-10398.81Type II secretion system protein F n=8 Tax=Gimesia... [more]
A0A517QFS2_9PLAN4.090e-7169.64Type II secretion system protein F n=2 Tax=Gimesia... [more]
A0A518AFM1_9PLAN1.460e-6567.86Type II secretion system protein F n=1 Tax=Gimesia... [more]
A0A517RPJ3_9PLAN6.280e-5456.55Type II secretion system protein F n=1 Tax=Gimesia... [more]
A0A517VP89_9PLAN1.370e-5357.40Type II secretion system protein F n=2 Tax=Gimesia... [more]
A0A518IL71_9PLAN2.120e-5155.56Type II secretion system protein F n=1 Tax=Gimesia... [more]
A0A2E2BWK7_9PLAN2.150e-4753.49Uncharacterized protein n=2 Tax=Planctomycetaceae ... [more]
A0A2E7D8E6_9PLAN5.440e-2638.69Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A7C4QLH1_9PLAN4.740e-2035.12Uncharacterized protein n=1 Tax=Schlesneria paludi... [more]
UPI00142249B74.880e-1732.94type II secretion system F family protein n=1 Tax=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042094Type II secretion system F domain superfamilyGENE3D1.20.81.30coord: 121..168
e-value: 1.4E-6
score: 30.2
IPR003004GspF/PilC familyPANTHERPTHR30012GENERAL SECRETION PATHWAY PROTEINcoord: 7..166
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..57
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..89
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 111..168
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..110
NoneNo IPR availableTMHMMTMhelixcoord: 88..110
NoneNo IPR availableTMHMMTMhelixcoord: 35..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig126894contigM-pyrifera_M_contig126894:3..506 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig126894.5413.1mRNA_M-pyrifera_M_contig126894.5413.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig126894 3..506 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig126894.5413.1 ID=prot_M-pyrifera_M_contig126894.5413.1|Name=mRNA_M-pyrifera_M_contig126894.5413.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp
IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFY
FLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKIAFIVIGGM
SLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARV
KLPEALMLAAQMTRDPNL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042094T2SS_F_sf
IPR003004GspF/PilC