prot_M-pyrifera_M_contig126852.5401.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig126852.5401.1
Unique Nameprot_M-pyrifera_M_contig126852.5401.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length141
Homology
BLAST of mRNA_M-pyrifera_M_contig126852.5401.1 vs. uniprot
Match: UPI001E1D7FE3 (RAD50-interacting protein 1 isoform X3 n=1 Tax=Echinops telfairi TaxID=9371 RepID=UPI001E1D7FE3)

HSP 1 Score: 70.9 bits (172), Expect = 1.470e-11
Identity = 41/139 (29.50%), Postives = 75/139 (53.96%), Query Frame = 0
Query:    3 VQPLLNAEGLTTWDAAEEFAKAVVGMVREKIGHDLPELLYRRQDLFCNTLMECCAFDKTLVEIYGYSPENWNAVQAFASTDRLLEQWLSIEYAGGEEQFSSTVSAKDAWLLQYPSFSDADPVRHSRSAEALVEHVASLT 141
            +QP+L+  G    +A  EF++ +V +V EK+G D+P LLY   +LFC+ + E   F++ L   +GY P  +       S +   ++WL++E     ++  S +S++ AW+ QY   +D D ++    AE  +  +  +T
Sbjct:  355 IQPILDKAGSLV-NARLEFSRGLVMLVLEKLGADIPCLLYD-DNLFCHLVDEVLLFERELHSAHGY-PGTFANCMHILSEETCFQRWLTVERKFALQKMDSMLSSEAAWVSQYKDITDVDEMKVPDCAETFMTLLLVIT 490          
BLAST of mRNA_M-pyrifera_M_contig126852.5401.1 vs. uniprot
Match: A0A2P6NA99_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NA99_9EUKA)

HSP 1 Score: 69.3 bits (168), Expect = 5.200e-11
Identity = 42/160 (26.25%), Postives = 75/160 (46.88%), Query Frame = 0
Query:    3 VQPLLNAEGLTTWDAAEEFAKAVVGMVREKIGHDLPELLYRRQDLFCNTLMECCAFDKTLVEIYGY---SPENWN------------------AVQAFASTDRLLEQWLSIEYAGGEEQFSSTVSAKDAWLLQYPS-FSDADPVRHSRSAEALVEHVASL 140
            VQP+L+   ++ +DA EEF K +V ++  K+ HD+P+ L     +F +T+ E   F+KTL +I+ Y    P+ W+                   ++     DR+ + W+  E      Q +  +  ++ W  ++   FSD D      S   + +H+ASL
Sbjct:  314 VQPILDKNAMSYYDAKEEFIKGLVRVINTKLRHDIPQRLLSNPSVFYHTINEAIQFEKTLQDIHEYPQHQPDLWSQNRSKSTASSSDLYDNITVLEVLTEDDRVFDAWIREEALYLRRQMNEEMKEEEMWKSRFSEGFSDID----HWSIPLVTDHLASL 469          
BLAST of mRNA_M-pyrifera_M_contig126852.5401.1 vs. uniprot
Match: A0A0B6ZWY6_9EUPU (Uncharacterized protein n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6ZWY6_9EUPU)

HSP 1 Score: 67.4 bits (163), Expect = 2.440e-10
Identity = 40/140 (28.57%), Postives = 66/140 (47.14%), Query Frame = 0
Query:    2 HVQPLLNAEGLTTWDAAEEFAKAVVGMVREKIGHDLPELLYRRQDLFCNTLMECCAFDKTLVEIYGYSPENWNAVQAFASTDRLLEQWLSIEYAGGEEQFSSTVSAKDAWLLQYPSFSDADPVRHSRSAEALVEHVASLT 141
            ++QPLL+  G     A  E  + +V MV EKIGHDLP+L++   + F + + E   FD  +   Y Y P     +    S    L +WL +E     ++    + +   W  QY   +D D V+    AE+ +  + ++T
Sbjct:  290 NIQPLLDESGRRDVCARTELTRGLVMMVMEKIGHDLPQLVFDEAN-FSHLIDEVLLFDSEIRNTYSYPPILPGCLDVL-SLPEALTKWLVMEQKFAMQKIEQMLQSPSCWESQYKGITDLDEVKVPECAESFMTLLHTIT 427          
BLAST of mRNA_M-pyrifera_M_contig126852.5401.1 vs. uniprot
Match: A0A2C9K3C0_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9K3C0_BIOGL)

HSP 1 Score: 64.7 bits (156), Expect = 2.120e-9
Identity = 38/140 (27.14%), Postives = 65/140 (46.43%), Query Frame = 0
Query:    2 HVQPLLNAEGLTTWDAAEEFAKAVVGMVREKIGHDLPELLYRRQDLFCNTLMECCAFDKTLVEIYGYSPENWNAVQAFASTDRLLEQWLSIEYAGGEEQFSSTVSAKDAWLLQYPSFSDADPVRHSRSAEALVEHVASLT 141
            ++QP+L+  G     A  E  + +V +V EKIG DLP+L+Y    L  + + E   FD  +   Y Y P     +      + L + WL +E     ++    + +   W  QY S  D+D V+    AE+ +  + ++T
Sbjct:  279 NIQPILDETGKANICARTELTRGLVMLVMEKIGQDLPQLVYDESSL-SHLIDEVLLFDSEIRNTYSYPPMLPGCLDVLCLPEALTK-WLLVEKKYAMQKIEQMLQSPSCWESQYKSVEDSDEVKVPECAESFMTLLHTMT 416          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126852.5401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
UPI001E1D7FE31.470e-1129.50RAD50-interacting protein 1 isoform X3 n=1 Tax=Ech... [more]
A0A2P6NA99_9EUKA5.200e-1126.25Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A0B6ZWY6_9EUPU2.440e-1028.57Uncharacterized protein n=1 Tax=Arion vulgaris Tax... [more]
A0A2C9K3C0_BIOGL2.120e-927.14Uncharacterized protein n=1 Tax=Biomphalaria glabr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007528RINT-1/Tip20PFAMPF04437RINT1_TIP1coord: 2..135
e-value: 9.2E-18
score: 64.4
IPR007528RINT-1/Tip20PANTHERPTHR13520RAD50-INTERACTING PROTEIN 1 RINT-1coord: 2..141
IPR007528RINT-1/Tip20PROSITEPS51386RINT1_TIP20coord: 1..141
score: 22.102
NoneNo IPR availablePANTHERPTHR13520:SF0RAD50-INTERACTING PROTEIN 1coord: 2..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig126852contigM-pyrifera_M_contig126852:86..508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig126852.5401.1mRNA_M-pyrifera_M_contig126852.5401.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig126852 86..508 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig126852.5401.1 ID=prot_M-pyrifera_M_contig126852.5401.1|Name=mRNA_M-pyrifera_M_contig126852.5401.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=141bp
VHVQPLLNAEGLTTWDAAEEFAKAVVGMVREKIGHDLPELLYRRQDLFCN
TLMECCAFDKTLVEIYGYSPENWNAVQAFASTDRLLEQWLSIEYAGGEEQ
FSSTVSAKDAWLLQYPSFSDADPVRHSRSAEALVEHVASLT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007528RINT1_Tip20