prot_M-pyrifera_M_contig126737.5383.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig126737.5383.1
Unique Name	prot_M-pyrifera_M_contig126737.5383.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	169

Homology

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BLAST of mRNA_M-pyrifera_M_contig126737.5383.1 vs. uniprot
Match: A0A517WH19_9PLAN (Nitrogen regulation protein NR(I) n=8 Tax=Gimesia TaxID=1649453 RepID=A0A517WH19_9PLAN)

HSP 1 Score: 317 bits (813), Expect = 6.710e-105
Identity = 163/169 (96.45%), Postives = 166/169 (98.22%), Query Frame = 0

Query:    1 SHTSDVVTAVAAMKEGADEFLVKPLQPESLVKLVKGYLQARQSRVAVEENHGSGTARLGRYVGFEKMVGTTQVMQQLFERAQRVAETDSTVLITGESGTGKELLAEAIHRNSLRAEHPFVTINMAAVPEHLVESELFGHVKGSFTGASESRVGRFEAAHGGTLFIDEIG 169
            SHTSDVVTAVAAMK+GADEFLVKPLQPESLVKL++GYLQARQSRVAVEENHGS TARLGRYVGFEKMVGTTQVMQQLFERAQRVA TDSTVLITGESGTGKELLAEAIHRNSLRAEHPFVTINMAAVPEHLVESELFGHVKGSF GASESRVGRFEAAHGGTLFIDEIG
Sbjct:   81 SHTSDVVTAVAAMKQGADEFLVKPLQPESLVKLIEGYLQARQSRVAVEENHGSSTARLGRYVGFEKMVGTTQVMQQLFERAQRVAGTDSTVLITGESGTGKELLAEAIHRNSLRAEHPFVTINMAAVPEHLVESELFGHVKGSFNGASESRVGRFEAAHGGTLFIDEIG 249

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BLAST of mRNA_M-pyrifera_M_contig126737.5383.1 vs. uniprot
Match: A0A355G3S0_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A355G3S0_9PLAN)

HSP 1 Score: 197 bits (502), Expect = 3.840e-58
Identity = 107/169 (63.31%), Postives = 130/169 (76.92%), Query Frame = 0

Query:    1 SHTSDVVTAVAAMKEGADEFLVKPLQPESLVKLVKGYLQARQSRVAVEENHGSGTARLGRYVGFEKMVGTTQVMQQLFERAQRVAETDSTVLITGESGTGKELLAEAIHRNSLRAEHPFVTINMAAVPEHLVESELFGHVKGSFTGASESRVGRFEAAHGGTLFIDEIG 169
            S + D+  AV AMK+GA ++L KP+ PE L+  +   L++ +   A   +H   TA+ G    FEK+VG +  MQ++FE A+RVA+TDSTVLITGESGTGKEL+AEAIH+NS RA   FVT+NMAAVPEHLVESELFGH KGSFTGA+ESR GRFEAAHGGTLFIDEIG
Sbjct:  111 SRSEDIDAAVTAMKQGAADYLHKPVNPEKLIHSIIACLRSVRHD-ADNHSHRQPTAQQG----FEKIVGQSGSMQEIFEDARRVAQTDSTVLITGESGTGKELIAEAIHQNSPRAAEQFVTVNMAAVPEHLVESELFGHTKGSFTGATESRRGRFEAAHGGTLFIDEIG 274

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BLAST of mRNA_M-pyrifera_M_contig126737.5383.1 vs. uniprot
Match: A0A517XFI1_9PLAN (Nitrogen assimilation regulatory protein n=6 Tax=Planctomycetaceae TaxID=126 RepID=A0A517XFI1_9PLAN)

HSP 1 Score: 193 bits (490), Expect = 1.260e-56
Identity = 105/170 (61.76%), Postives = 129/170 (75.88%), Query Frame = 0

Query:    1 SHTSDVVTAVAAMKEGADEFLVKPLQPESLVKLVKGYLQ-ARQSRVAVEENHGSGTARLGRYVGFEKMVGTTQVMQQLFERAQRVAETDSTVLITGESGTGKELLAEAIHRNSLRAEHPFVTINMAAVPEHLVESELFGHVKGSFTGASESRVGRFEAAHGGTLFIDEIG 169
            S + ++ TAV AMK+GA ++L KP+  + L++ V   ++ AR +  AV  +    +       GFE +VG +  MQ++FE A+RVA+TDSTVLITGESGTGKEL+AEAIHRNS RA  PFVT+NMAAVPEHLVESELFGH KGSFTGA+ESR GRFEAAH GTLFIDEIG
Sbjct:   82 SSSDNIDTAVTAMKQGAADYLRKPVNSQKLIQSVITCMRSARDAASAVSASQHRPSQH-----GFENIVGQSGAMQEIFEDARRVAQTDSTVLITGESGTGKELIAEAIHRNSPRAAEPFVTVNMAAVPEHLVESELFGHTKGSFTGATESRRGRFEAAHDGTLFIDEIG 246

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BLAST of mRNA_M-pyrifera_M_contig126737.5383.1 vs. uniprot
Match: A0A517VHY6_9PLAN (Nitrogen assimilation regulatory protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VHY6_9PLAN)

HSP 1 Score: 192 bits (488), Expect = 2.500e-56
Identity = 104/169 (61.54%), Postives = 128/169 (75.74%), Query Frame = 0

Query:    1 SHTSDVVTAVAAMKEGADEFLVKPLQPESLVKLVKGYLQARQSRVAVEENHGSGTARLGRYVGFEKMVGTTQVMQQLFERAQRVAETDSTVLITGESGTGKELLAEAIHRNSLRAEHPFVTINMAAVPEHLVESELFGHVKGSFTGASESRVGRFEAAHGGTLFIDEIG 169
            S + ++  AVAAMK GA ++L KP+  E L+  V   LQ+ ++   +  +      R  +Y GFE +VG ++ MQ++FE A+RVA+TDSTVLITGESGTGKEL+AEA+HRNS RA   FVT+NMAAVPEHLVESELFGH KGSFTGA+ESR GRFEAAH GTLFIDEIG
Sbjct:   82 SSSDNIDAAVAAMKHGAADYLQKPVNSEKLINSVITCLQSVRN---IAPHTNPSRLRTSQY-GFENIVGQSRAMQEIFEDARRVAQTDSTVLITGESGTGKELIAEALHRNSPRAAEQFVTVNMAAVPEHLVESELFGHTKGSFTGATESRRGRFEAAHHGTLFIDEIG 246

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BLAST of mRNA_M-pyrifera_M_contig126737.5383.1 vs. uniprot
Match: A0A5Q4H3Z9_9PLAN (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A5Q4H3Z9_9PLAN)

HSP 1 Score: 187 bits (476), Expect = 3.110e-54
Identity = 98/165 (59.39%), Postives = 128/165 (77.58%), Query Frame = 0

Query:    5 DVVTAVAAMKEGADEFLVKPLQPESLVKLVKGYLQARQSRVAVEENHGSGTARLGRYVGFEKMVGTTQVMQQLFERAQRVAETDSTVLITGESGTGKELLAEAIHRNSLRAEHPFVTINMAAVPEHLVESELFGHVKGSFTGASESRVGRFEAAHGGTLFIDEIG 169
            +V +AV AMK GA ++L KP+ PE L+ LV   L++R+    + E       RL R +GFE+++G +Q M  +F++A+RVA T++TVL+TGESGTGKEL+AEAIH+NS R   PFVT+NMAAVP HL ESELFGHVKG+FTGA++SRVGRFEAA+ GT+FIDEIG
Sbjct:  103 EVDSAVEAMKLGAADYLNKPVNPEELLLLVAKCLESRRKDQTISELQ----LRLDRRLGFERIIGRSQAMLTVFDQARRVAMTETTVLVTGESGTGKELIAEAIHQNSPRRNGPFVTVNMAAVPSHLAESELFGHVKGAFTGATDSRVGRFEAANHGTIFIDEIG 263

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BLAST of mRNA_M-pyrifera_M_contig126737.5383.1 vs. uniprot
Match: A0A3E0ND76_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0ND76_9BACT)

HSP 1 Score: 186 bits (472), Expect = 7.450e-54
Identity = 98/165 (59.39%), Postives = 127/165 (76.97%), Query Frame = 0

Query:    5 DVVTAVAAMKEGADEFLVKPLQPESLVKLVKGYLQARQSRVAVEENHGSGTARLGRYVGFEKMVGTTQVMQQLFERAQRVAETDSTVLITGESGTGKELLAEAIHRNSLRAEHPFVTINMAAVPEHLVESELFGHVKGSFTGASESRVGRFEAAHGGTLFIDEIG 169
            +V +AV AMK GA+++L KP+ P+ L+ LVK  L+AR+    +E+       RL   +GFEK+VG ++ + ++F+ A+R A ++STVL+TGESGTGKEL+AEAIH NS R E PFV +NMAAVPEHLVESELFGH KG+FTGA ESRVGRFE A+ GT+FIDEIG
Sbjct:  106 EVDSAVEAMKLGAEDYLSKPVNPDELLILVKKCLEARRRDETIEQLQ----ERLDDRLGFEKIVGKSKSILEVFDNARRAAVSESTVLVTGESGTGKELIAEAIHHNSPRKEGPFVVVNMAAVPEHLVESELFGHAKGAFTGAMESRVGRFETANEGTIFIDEIG 266

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BLAST of mRNA_M-pyrifera_M_contig126737.5383.1 vs. uniprot
Match: A0A7V4PAJ8_9PLAN (Sigma-54-dependent Fis family transcriptional regulator (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7V4PAJ8_9PLAN)

HSP 1 Score: 166 bits (419), Expect = 1.130e-47
Identity = 86/165 (52.12%), Postives = 114/165 (69.09%), Query Frame = 0

Query:    5 DVVTAVAAMKEGADEFLVKPLQPESLVKLVKGYLQARQSRVAVEENHGSGTARLGRYVGFEKMVGTTQVMQQLFERAQRVAETDSTVLITGESGTGKELLAEAIHRNSLRAEHPFVTINMAAVPEHLVESELFGHVKGSFTGASESRVGRFEAAHGGTLFIDEIG 169
            DV +AV AMK GA ++L KP+ P  L+ +++  LQ + +    E       A       F  ++G ++ MQ +FER +R A+TD  VLI GESGTGKEL+A AIHR S R   P+V +NMAA+P HLVESELFGHV+G+FTGA+++RVGRF+ A GGT+FIDEIG
Sbjct:   86 DVDSAVRAMKLGAADYLTKPVDPNRLLNVIREVLQ-KPAAAEAEAVAAPAPAENPADAAFGPLIGRSRAMQDVFERIRRAAQTDGIVLILGESGTGKELVASAIHRESHRRNGPYVPVNMAAIPSHLVESELFGHVRGAFTGATDARVGRFQIASGGTIFIDEIG 249

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BLAST of mRNA_M-pyrifera_M_contig126737.5383.1 vs. uniprot
Match: A0A142Y0K3_9BACT (Transcriptional regulatory protein ZraR n=1 Tax=Pirellula sp. SH-Sr6A TaxID=1632865 RepID=A0A142Y0K3_9BACT)

HSP 1 Score: 168 bits (425), Expect = 3.940e-47
Identity = 91/165 (55.15%), Postives = 121/165 (73.33%), Query Frame = 0

Query:    5 DVVTAVAAMKEGADEFLVKPLQPESLVKLVKGYLQARQSRVAVEENHGSGTARLGRYVGFEKMVGTTQVMQQLFERAQRVAETDSTVLITGESGTGKELLAEAIHRNSLRAEHPFVTINMAAVPEHLVESELFGHVKGSFTGASESRVGRFEAAHGGTLFIDEIG 169
            DV TAVAAMK GA ++L+KPL+P+ L+ L+  YL  R      ++ H      LG      KM+G +  M+++FE  +RVAE+DS VLITGESGTGKEL+A AIH+ SLR    +V +N+AA+PE L+E+ELFG+V+G+FTGA+ESR GRF+AA GGTLF+DEIG
Sbjct:   86 DVDTAVAAMKMGAIDYLMKPLKPDELLVLLNRYLPMRPQPSITDDEHAGV---LG------KMIGNSPAMRRVFESIKRVAESDSIVLITGESGTGKELVAAAIHQLSLRKASSYVAVNIAALPEPLIEAELFGYVRGAFTGANESRHGRFQAAQGGTLFMDEIG 241

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BLAST of mRNA_M-pyrifera_M_contig126737.5383.1 vs. uniprot
Match: A0A7C3XQT8_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7C3XQT8_9BACT)

HSP 1 Score: 167 bits (424), Expect = 1.130e-46
Identity = 90/166 (54.22%), Postives = 116/166 (69.88%), Query Frame = 0

Query:    4 SDVVTAVAAMKEGADEFLVKPLQPESLVKLVKGYLQARQSRVAVEENHGSGTARLGRYVGFEKMVGTTQVMQQLFERAQRVAETDSTVLITGESGTGKELLAEAIHRNSLRAEHPFVTINMAAVPEHLVESELFGHVKGSFTGASESRVGRFEAAHGGTLFIDEIG 169
            S V TAV AMK GA ++L KP+ PE LV +++  + + +    +E+       RL +  G E ++G +Q M+ +F R QR A  DSTVLI GESGTGKEL+A+A+H NS R   PFV +N AAVP  LVESELFGHV+G+FTGA++ R+GRFE A GGTLFIDEIG
Sbjct:  104 SSVNTAVQAMKAGAYDYLTKPVNPEELVLVLRRAVDSTRKDREIEDLR----RRLDQKFGLEHIIGQSQPMKAVFARIQRAAVVDSTVLILGESGTGKELVAQALHHNSRRRAGPFVAVNCAAVPSTLVESELFGHVRGAFTGATDRRIGRFEQADGGTLFIDEIG 265

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BLAST of mRNA_M-pyrifera_M_contig126737.5383.1 vs. uniprot
Match: A0A7M2WZX9_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7M2WZX9_9BACT)

HSP 1 Score: 167 bits (422), Expect = 1.480e-46
Identity = 86/166 (51.81%), Postives = 118/166 (71.08%), Query Frame = 0

Query:    4 SDVVTAVAAMKEGADEFLVKPLQPESLVKLVKGYLQARQSRVAVEENHGSGTARLGRYVGFEKMVGTTQVMQQLFERAQRVAETDSTVLITGESGTGKELLAEAIHRNSLRAEHPFVTINMAAVPEHLVESELFGHVKGSFTGASESRVGRFEAAHGGTLFIDEIG 169
            S V  AV AMK GA ++L KP+ P+ LV +V+  ++       +++       RL +  G E+++G ++ M+++F R QR A  DSTVLI GESGTGKEL+A+A+H NS R + PFV +N+AAVP  LVESELFGHV+G+FTGA++ R+GRFE A GGTLFIDE+G
Sbjct:   85 SSVNAAVDAMKAGAYDYLTKPINPDELVLIVRRAIETLHKENEIDDLR----RRLDQRFGLERIIGQSRPMKEVFARIQRAAPVDSTVLILGESGTGKELVAQALHHNSHRKKGPFVAVNIAAVPSTLVESELFGHVRGAFTGATDRRMGRFEQADGGTLFIDEVG 246

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig126737.5383.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig126737.5383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A517WH19_9PLAN	6.710e-105	96.45	Nitrogen regulation protein NR(I) n=8 Tax=Gimesia ...	[more]
A0A355G3S0_9PLAN	3.840e-58	63.31	Uncharacterized protein n=2 Tax=Planctomycetaceae ...	[more]
A0A517XFI1_9PLAN	1.260e-56	61.76	Nitrogen assimilation regulatory protein n=6 Tax=P...	[more]
A0A517VHY6_9PLAN	2.500e-56	61.54	Nitrogen assimilation regulatory protein n=1 Tax=G...	[more]
A0A5Q4H3Z9_9PLAN	3.110e-54	59.39	Sigma-54-dependent Fis family transcriptional regu...	[more]
A0A3E0ND76_9BACT	7.450e-54	59.39	Sigma-54-dependent Fis family transcriptional regu...	[more]
A0A7V4PAJ8_9PLAN	1.130e-47	52.12	Sigma-54-dependent Fis family transcriptional regu...	[more]
A0A142Y0K3_9BACT	3.940e-47	55.15	Transcriptional regulatory protein ZraR n=1 Tax=Pi...	[more]
A0A7C3XQT8_9BACT	1.130e-46	54.22	Sigma-54-dependent Fis family transcriptional regu...	[more]
A0A7M2WZX9_9BACT	1.480e-46	51.81	Sigma-54-dependent Fis family transcriptional regu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 57..169 e-value: 6.4E-39 score: 135.4
None	No IPR available	GENE3D	3.40.50.2300		coord: 1..51 e-value: 1.7E-7 score: 33.2
None	No IPR available	PANTHER	PTHR32071:SF57		coord: 3..169
None	No IPR available	PANTHER	PTHR32071	FAMILY NOT NAMED	coord: 3..169
IPR002078	RNA polymerase sigma factor 54 interaction domain	PFAM	PF00158	Sigma54_activat	coord: 67..169 e-value: 4.0E-42 score: 143.8
IPR002078	RNA polymerase sigma factor 54 interaction domain	PROSITE	PS50045	SIGMA54_INTERACT_4	coord: 67..169 score: 26.517
IPR025662	Sigma-54 interaction domain, ATP-binding site 1	PROSITE	PS00675	SIGMA54_INTERACT_1	coord: 91..104
IPR025943	Sigma-54 interaction domain, ATP-binding site 2	PROSITE	PS00676	SIGMA54_INTERACT_2	coord: 153..168
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 1..38 score: 13.628
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 3..46
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 67..169

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig126737	contig	M-pyrifera_M_contig126737:1..507 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig126737.5383.1	mRNA_M-pyrifera_M_contig126737.5383.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig126737 1..507 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig126737.5383.1 ID=prot_M-pyrifera_M_contig126737.5383.1|Name=mRNA_M-pyrifera_M_contig126737.5383.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp
SHTSDVVTAVAAMKEGADEFLVKPLQPESLVKLVKGYLQARQSRVAVEEN
HGSGTARLGRYVGFEKMVGTTQVMQQLFERAQRVAETDSTVLITGESGTG
KELLAEAIHRNSLRAEHPFVTINMAAVPEHLVESELFGHVKGSFTGASES
RVGRFEAAHGGTLFIDEIG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002078	Sigma_54_int
IPR025662	Sigma_54_int_dom_ATP-bd_1
IPR025943	Sigma_54_int_dom_ATP-bd_2
IPR001789	Sig_transdc_resp-reg_receiver
IPR011006	CheY-like_superfamily
IPR027417	P-loop_NTPase